prot_Ecto-sp13_S_contig9968.21613.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9968.21613.1
Unique Nameprot_Ecto-sp13_S_contig9968.21613.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length772
Homology
BLAST of mRNA_Ecto-sp13_S_contig9968.21613.1 vs. uniprot
Match: D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)

HSP 1 Score: 1017 bits (2629), Expect = 0.000e+0
Identity = 682/781 (87.32%), Postives = 693/781 (88.73%), Query Frame = 0
Query:    1 ARLLFELTASGEWQARHGGFCSLESLCAVAITGDGVDGRGAEDVCAAAARAVRLVMRRFLPPPVEAGRDNHGGEAGLALAPASWQRRERGPTGDAKREAEVSRSCGGGGDVFDLVWKALEDLDQDSTCVVDLADLLETCCEDVGRASGATDPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPVAKTRSAGESAAA-TRCERLLVRCFQALLSERDDGVRKHSARLWSELLKGLGRADGHRGAAHASLMASCLGVLFAPPAMPPPPTATMEGVTT--AATADXXXXXXXXXXXXXXXXSK-RARGETSGSPEDVSA---ARPPSKHQQRAVQADAIVEGPAGAGASATFFGRLASAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGRGIASDGET--EGVVAAKKTARELVMFEVARRAGSGWAWEQELAFFLMEACCAGGGVGARGRNGGGSASSRGDEVLSKAEQDAWAAVDRALATKDDAAAAGHKVFKELEGVDKAVSAACSGVIRVLLQAAGGAATVTPETVEQASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPSKGGKSRSQGTARAATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGETLVPVDRSATREEREAVWTGRVRHFHARIQAQQAVLTRRVTSAAASVYAGVRPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLAAALLGDAERSERRDAGAMVLFGLASLSGKGQQQS 772
            ARLLFELTASGEWQARHGGFCSLESLCAVAITGDG DGRGAEDVCAAAARAVRLVMRRFLPPPVEAGRDNHGGEAGL LAPA  QRRERGPTGDA+ EAEV RSCGGGG+VFDLVWKALEDLDQDSTCV DLADLLETCCEDVGRASGATDPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPV KT+S GESAAA TRCERLL+RCFQALLSERDDGVR+HSARLWSELLKGLGRADGHR AAHASLMASCLG+LFAPPA P   T  ME VTT  +ATADXXXXXXXXXXXXXXXX   RARGETSGSPEDV+A   ARPPSKHQ RAVQAD I EGPAGAGASATFFGRLASAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              EGVVAAKKTAREL M EVARRAGSGWAWEQELAFFLMEAC               S S+RGDEV SKAEQDAWAAVDRALATKDDAAA GHKVFKELEGVDKAVSAACSGVIRVLLQA                  XXXXXXXXXXXXXXXXXXXXXXXXXXX   P KGGKSRSQGTA+AATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGETLVPVDR ATREEREAVWTGRVRHFHARIQAQQAVLTRR+TSAAASVYAGVRPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLA ALLGDA RSERRDAGAMVLFGLASLSGKGQQQS
Sbjct:  430 ARLLFELTASGEWQARHGGFCSLESLCAVAITGDGADGRGAEDVCAAAARAVRLVMRRFLPPPVEAGRDNHGGEAGLTLAPAGRQRRERGPTGDAEGEAEVWRSCGGGGEVFDLVWKALEDLDQDSTCVEDLADLLETCCEDVGRASGATDPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPVTKTQSVGESAAAATRCERLLLRCFQALLSERDDGVREHSARLWSELLKGLGRADGHRRAAHASLMASCLGILFAPPATPXXXTTAMEDVTTPASATADXXXXXXXXXXXXXXXXXXXRARGETSGSPEDVAAFSTARPPSKHQNRAVQADTIAEGPAGAGASATFFGRLASAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVVAAKKTARELAMSEVARRAGSGWAWEQELAFFLMEACXXXXXXXXXXXXXXXSTSTRGDEVPSKAEQDAWAAVDRALATKDDAAAVGHKVFKELEGVDKAVSAACSGVIRVLLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPKGGKSRSQGTAKAATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGETLVPVDRGATREEREAVWTGRVRHFHARIQAQQAVLTRRITSAAASVYAGVRPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLATALLGDAVRSERRDAGAMVLFGLASLSGKGQQQS 1210          
BLAST of mRNA_Ecto-sp13_S_contig9968.21613.1 vs. uniprot
Match: A0A6H5J7D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D4_9PHAE)

HSP 1 Score: 644 bits (1661), Expect = 1.760e-222
Identity = 391/488 (80.12%), Postives = 398/488 (81.56%), Query Frame = 0
Query:    1 ARLLFELTASGEWQARHGGFCSLESLCAVAITGDGVDGRGA------------------------EDVCAAAARAVRLVMRRFLPPPVEAGRDNHGGEAGLALAPASWQRRERGPTGDAKREAEVSRSCGGGGDVFDLVWKALEDLDQDSTCVVDLADLLETCCEDVGRASGATDPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPVAKTRSAGESAAATRCERLLVRCFQALLSERDDGVRKHSARLWSELLKGLGRADGHRGAAHASLMASCLGVLFAPPAMPPPPTATMEGVTTAATADXXXXXXXXXXXXXXXXSKRARGETSGSPEDVSAARPPSKHQQRAVQADAIVEGPAGAGASATFFGRLASAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGRGIASDGETEGVVAAKKTARELVMFEVARRAGSGWAWEQELAFFLMEAC 464
            ARLLFELTASGEWQARHGGFCSLESLCAVAITGDG DGRGA                        EDVCAAAAR VRLVMRRFLPP VEAGRDN+GGEA LALAPA  QR+ERGPTGDAK EAEV RSCGGGG+VFDLVWKALEDLDQDSTCV DLADLLETCCEDVGRASGATDPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPVAKT+SAGESAAAT CERLL+RCFQALLSERDDGVR+HSARLWSELLKGLGRADGHRGAAHASLMASCLGVLF PPA  PPPT  ME VTTAATAD                SKRARGETSG PED SAARPPSKHQQRAVQ D  VEGP GAGASATF GRLASAGAL                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          ETEGVVAAKKTA+ELVM EVARRAGSGWAWEQELAFFLMEAC
Sbjct:   29 ARLLFELTASGEWQARHGGFCSLESLCAVAITGDGADGRGAPPEVSAFLHGLVYRAAPRGLSDPAEDVCAAAARTVRLVMRRFLPP-VEAGRDNNGGEARLALAPAGRQRQERGPTGDAKGEAEVLRSCGGGGEVFDLVWKALEDLDQDSTCVEDLADLLETCCEDVGRASGATDPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPVAKTQSAGESAAATSCERLLLRCFQALLSERDDGVREHSARLWSELLKGLGRADGHRGAAHASLMASCLGVLFTPPATRPPPTTAMEDVTTAATADSAASPSSASTRPARRPSKRARGETSGRPEDASAARPPSKHQQRAVQTDTTVEGPVGAGASATFLGRLASAGALAELARASATAAADGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEGVVAAKKTAQELVMSEVARRAGSGWAWEQELAFFLMEAC 515          
BLAST of mRNA_Ecto-sp13_S_contig9968.21613.1 vs. uniprot
Match: A0A6H5J4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4R7_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 9.790e-120
Identity = 246/335 (73.43%), Postives = 249/335 (74.33%), Query Frame = 0
Query:  485 GDEVLSKAEQDAWAAVDRALATKDDAAAAGHKVFKELEGVDKAVSAACSGVIRVLLQ-----------------------------------------------AAGGAATVTPETVEQASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXARKPSKGGKSRSQGTARAATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGETLVPVDRSATREEREAVWTGRVRHFHARIQAQQAVLTRRVTSAAASVYAGVRPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLAAALLGDAERSERRDAGAMVLFGLASLSGKGQQQS 772
            GDEVLSKAEQDAWAAVDRALATKDDAA  G KVFKELEGVDKAVSAACSGVIRVLLQ                                               A GGAAT T  TVEQASPA                           AR PSKGGKSRS+GTA+AATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGETLVPVDR+ATREEREAVWTGRVRHFHARIQAQQAVL RRVTSAAASVYAGV PLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLA ALLGDA RSERRDAGAMVLFGLASLSGKGQQQS
Sbjct:    5 GDEVLSKAEQDAWAAVDRALATKDDAATVGQKVFKELEGVDKAVSAACSGVIRVLLQHTFLEDVLVATTSVTAPSRRCRSYASRHPSRIRRKDNVVVMAEAYEDAGGGAATATAGTVEQASPAAGSASGNKGVTTVTSSTAAGSQRADAAARNPSKGGKSRSKGTAKAATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGETLVPVDRAATREEREAVWTGRVRHFHARIQAQQAVLMRRVTSAAASVYAGVLPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLATALLGDAARSERRDAGAMVLFGLASLSGKGQQQS 339          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9968.21613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBB5_ECTSI0.000e+087.32Essential abundant protein involved in regulation ... [more]
A0A6H5J7D4_9PHAE1.760e-22280.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J4R7_9PHAE9.790e-12073.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022707Domain of unknown function DUF3535PFAMPF12054DUF3535coord: 670..739
e-value: 2.2E-9
score: 37.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9968contigEcto-sp13_S_contig9968:3..6076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9968.21613.1mRNA_Ecto-sp13_S_contig9968.21613.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9968 3..6076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9968.21613.1 ID=prot_Ecto-sp13_S_contig9968.21613.1|Name=mRNA_Ecto-sp13_S_contig9968.21613.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=772bp
ARLLFELTASGEWQARHGGFCSLESLCAVAITGDGVDGRGAEDVCAAAAR
AVRLVMRRFLPPPVEAGRDNHGGEAGLALAPASWQRRERGPTGDAKREAE
VSRSCGGGGDVFDLVWKALEDLDQDSTCVVDLADLLETCCEDVGRASGAT
DPFLSSGERRLNRLLDLWEDVRAGVRACAVRSLLALAQGIVGATRPVAKT
RSAGESAAATRCERLLVRCFQALLSERDDGVRKHSARLWSELLKGLGRAD
GHRGAAHASLMASCLGVLFAPPAMPPPPTATMEGVTTAATADSTASSSPA
STRPARRPSKRARGETSGSPEDVSAARPPSKHQQRAVQADAIVEGPAGAG
ASATFFGRLASAGALAELARASAAAAADGEEAAARGDGASATGKTGSSGC
RGSRSGKRARAVSDGRGIASDGETEGVVAAKKTARELVMFEVARRAGSGW
AWEQELAFFLMEACCAGGGVGARGRNGGGSASSRGDEVLSKAEQDAWAAV
DRALATKDDAAAAGHKVFKELEGVDKAVSAACSGVIRVLLQAAGGAATVT
PETVEQASPAAGSASSNEGVTTATSSTAAGSQRANAAARKPSKGGKSRSQ
GTARAATVRGSSARSRSTAPVPPTATPAPLQGAASVERTFQSLAAAFGET
LVPVDRSATREEREAVWTGRVRHFHARIQAQQAVLTRRVTSAAASVYAGV
RPLPPELNPVLRPLVSAVKKEPDAQRRGLSASRLARLAAALLGDAERSER
RDAGAMVLFGLASLSGKGQQQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022707DUF3535