prot_Ecto-sp13_S_contig9960.21608.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9960.21608.1
Unique Nameprot_Ecto-sp13_S_contig9960.21608.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length744
Homology
BLAST of mRNA_Ecto-sp13_S_contig9960.21608.1 vs. uniprot
Match: D8LHM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM7_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 1.220e-163
Identity = 485/639 (75.90%), Postives = 493/639 (77.15%), Query Frame = 0
Query:  113 GEAXXXXXXXXXXSVEEDAVAEGGAAEDHQDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPETAETEASGTMIVTGSGDGGEEGGEGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPTQPASTSGXXXXXXXXXXXXXXXXXXXXRWQVQSTAGGGDALAAEGGAGRMYGDRLDDRGPTELAGVPASAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NKGKQCASDADCGGEHLACGGRSVCKCRFPWQGKFCQEDACLGSSLSCDACHEFNKDALPAEGGSPFLCVWAADEGRCRSSPSTASALPECPDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLRDPQQQTPTELLYTAGLPLLVVVLVGGLLVFVAKCVRKCSRGGSDGPNYTPVDTANIEESSGGEWAWDGEQEDDIEMPPKPSXXXXXXXXXXXXXXXXXX----RTQPGGPVPGSRDTASSMVLAGSASQDGAAXXXXXXXXXXXRNGASRPSKPGXXXXXXXXXXXXXXXXXXXXA--ARAGQQSDGTIGILADDDLFAELGIEAKPTFREKKSRPGPAADRSLALQASEAT 744
            GEA    XXXXXXSVEED VAEG AAE HQD   XXXXXXXXXXXXXXX             TPETAETEASGT I TGSGDGGEE                        X   XXXXXXXXXXXXXXXXXXXXXXXIPTQPASTSGXXXXXXXXXXXXXXXXXXXXRWQVQST G GDA AAEGGAGRMYGDRLDDRGPTELAGVPASAATGA                                  XXXXXXXXXXXXXXXXX NKGKQC SDADCGGEHLACGG  +CKCRFPW+G+ CQEDAC G  LSCDACHE NKD  PAEGGS FLCVWA DEGRCRSSPST SALPEC DAAXXXXXXXXXXXXXXXXXXXXXXXXX                APSLRDPQQQTPTELLYTAGLPLLVVVLVGGLL+FV KCVRKCSRGGSDGPNYTPVDTAN+EESSGGEWAWDGEQEDDIEMPPKPSXXXXXXXXXXXXXXXXXX    R QPGGP+PGSR+ ASSMVLAGS S+DGAA XXXXXXXXXX           XXXXXXXXXXXXXXXXXXXX   ARA QQSDGTIGILADDDLFAELGIEAKPTFREKK RPG AADRSLALQASEAT
Sbjct: 1099 GEAAAATXXXXXXSVEEDPVAEGSAAEGHQD---XXXXXXXXXXXXXXXSSHAEDNGRGGESTPETAETEASGTTIATGSGDGGEE------------------------XWGVXXXXXXXXXXXXXXXXXXXXXXXIPTQPASTSGXXXXXXXXXXXXXXXXXXXXRWQVQSTTGAGDAPAAEGGAGRMYGDRLDDRGPTELAGVPASAATGASSGQYSAAEGSDDVSPPANPPVESATGGDSGDGYXXXXXXXXXXXXXXXXXXNKGKQCTSDADCGGEHLACGGHGLCKCRFPWRGESCQEDACPGKFLSCDACHESNKDVPPAEGGSTFLCVWAEDEGRCRSSPSTVSALPECSDAAXXXXXXXXXXXXXXXXXXXXXXXXX----------------APSLRDPQQQTPTELLYTAGLPLLVVVLVGGLLMFVTKCVRKCSRGGSDGPNYTPVDTANVEESSGGEWAWDGEQEDDIEMPPKPSXXXXXXXXXXXXXXXXXXXXXSRAQPGGPMPGSRNPASSMVLAGSESRDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARQQSDGTIGILADDDLFAELGIEAKPTFREKKPRPGQAADRSLALQASEAT 1694          
BLAST of mRNA_Ecto-sp13_S_contig9960.21608.1 vs. uniprot
Match: A0A6H5K5H0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H0_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 1.370e-114
Identity = 409/555 (73.69%), Postives = 415/555 (74.77%), Query Frame = 0
Query:   42 GQEDGREPPXXXXXXXXXXXXXXXXXXXSSPLVEGNAPDHDGGGXXXXXXXXXXXXXQDXXXXXXXXQGVPGEAXXXXXXXXXXSVEEDAVAEGGAAEDHQDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TPETAETEASGTMIVTGSGDGGEEGGEGVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPTQPASTSGXXXXXXXXXXXXXXXXXXXXRWQVQSTAGGGDALAAEGGAGRMYGDRLDDRGPTELAGVPASAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKGKQCASDADCGGEHLACGGRSVCKCRFPWQGKFCQEDACLGSSLSCDACHEFNKDALPAEGGSPFLCVWAADEGRCRSSPSTASALPECPDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------APSLRDPQQQTPTELLYTAGLPLLVVVLVGGLLVFVAKCVRKCSRGGSDGPNYTPVDTANIEESSGGEWAWDGEQ 588
            GQEDGREP    XXXXX     XXXXXX SPLVEGNAPDHD G    XXXXXXXXX QD        QGVPGEA    XXXXXX   ED  AEG AAEDHQ   XXXXXXXXXXXXXX       XXXXXXXX  TPETAET+ASGT I T SGDGGEEG  GV                                                  PAS+  XXXXXXXXXXXXXXXXXXXX WQVQST G GDA AA GGAGRM GD LDDRGPTELAGVPASAATGA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X       XXXXXXXXX K   CASDADCGGEHLACGGR VCKCRFPWQGK CQEDACLGSSLSCDACHEFNK A PAEGGS FLCVWA DEG+CRSSPST SALPEC DAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      APSLRDPQQQ PTELLYTAGLPLLVVVLVG LLVFVAKCVRKCSRGGS+GPNYTPVDTAN+EESSGGEWAWDG+Q
Sbjct: 1093 GQEDGREP---LXXXXXAWDGEXXXXXXXSPLVEGNAPDHDDG----XXXXXXXXXSQDGGAGQGGRQGVPGEAAAATXXXXXXXXXEDPAAEGSAAEDHQXXXXXXXXXXXXXXXXXSHAEDNGXXXXXXXXESTPETAETKASGTTIATSSGDGGEEGW-GV--------------------------------------------------PASSXXXXXXXXXXXXXXXXXXXXXXXWQVQSTTGAGDAPAAGGGAGRMDGDPLDDRGPTELAGVPASAATGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXDGGVGSAXXXXXXXXXXK--PCASDADCGGEHLACGGRGVCKCRFPWQGKSCQEDACLGSSLSCDACHEFNKGAPPAEGGSTFLCVWAEDEGKCRSSPSTVSALPECSDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSLRDPQQQMPTELLYTAGLPLLVVVLVGVLLVFVAKCVRKCSRGGSEGPNYTPVDTANVEESSGGEWAWDGDQ 1587          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9960.21608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHM7_ECTSI1.220e-16375.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5H0_9PHAE1.370e-11473.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 256..697
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 256..697
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 528..549
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 550..744
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..527
NoneNo IPR availableTMHMMTMhelixcoord: 528..550

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9960contigEcto-sp13_S_contig9960:436..3698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9960.21608.1mRNA_Ecto-sp13_S_contig9960.21608.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9960 436..6079 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9960.21608.1 ID=prot_Ecto-sp13_S_contig9960.21608.1|Name=mRNA_Ecto-sp13_S_contig9960.21608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=744bp
MGSGQRGRRGPGEGSGRSTHGRGAAGGGAAGSTPRGQRRRHGQEDGREPP
PPPPPPPPPGDGEGDGGSGSSPLVEGNAPDHDGGGGGSGGSGGSGSGSQD
GGAGQGGQQGVPGEAAAATAAAAATSVEEDAVAEGGAAEDHQDGYEGEGG
GGGEGGEESSHAEDKGGSGGGGASTPETAETEASGTMIVTGSGDGGEEGG
EGVNGGGVVDGAGVVDGAGVVDGGGVVDGAGVVDGAGVVDGAGVVDGGGI
PTQPASTSGGGGSGMSAAAEEEAEQEDEERWQVQSTAGGGDALAAEGGAG
RMYGDRLDDRGPTELAGVPASAATGASSGHQSAAEGSGDVSPPANPPVES
ATGGGSGDGYGGGGVGSADGGGSGGGANKGKQCASDADCGGEHLACGGRS
VCKCRFPWQGKFCQEDACLGSSLSCDACHEFNKDALPAEGGSPFLCVWAA
DEGRCRSSPSTASALPECPDAAAAAAASAAAAASSAAAAAAPASEVAEAA
VSSSEQAAAAAGGAPSLRDPQQQTPTELLYTAGLPLLVVVLVGGLLVFVA
KCVRKCSRGGSDGPNYTPVDTANIEESSGGEWAWDGEQEDDIEMPPKPSP
PPPTVTSAGGGRRGGGSRTQPGGPVPGSRDTASSMVLAGSASQDGAAAAA
AAAAAAAARNGASRPSKPGRGAKGGGGRGRRGGRGAGGGAARAGQQSDGT
IGILADDDLFAELGIEAKPTFREKKSRPGPAADRSLALQASEAT
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