mRNA_Ecto-sp13_S_contig994.21590.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig994.21590.1
Unique NamemRNA_Ecto-sp13_S_contig994.21590.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: D7FZ49_ECTSI (NAD-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ49_ECTSI)

HSP 1 Score: 485 bits (1249), Expect = 6.060e-169
Identity = 262/304 (86.18%), Postives = 267/304 (87.83%), Query Frame = 1 
Query:  106 MQKFVLSGGLGLLGQRVLQHIVSSGHGCVRVMIVDTAPVQAAKSSGPPTAASGITXXXXXXXXXXGEVLGSSTARGA------------VSVVRGDLSCSDVAAAIKSFAGGDDGGGDHAET-ASSTLSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGGEQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSV 978
            MQKFVLSGGLGLLGQR+LQHIVSSGHGCVRVMIVDTAP+QAAKS GPPTAA GIT           EVLGSSTARGA            VSVVRGDLS SDVAAAIKSFA GDDGGGDHAET +SSTLSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGGEQVTDETKLLPQ       STYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVS DLRHACVGL SAVDGLIRLHDASEADFGPRDR++
Sbjct:    1 MQKFVLSGGLGLLGQRILQHIVSSGHGCVRVMIVDTAPLQAAKSGGPPTAAPGITGDPAVGNGAKCEVLGSSTARGAAAPIADDSSTGAVSVVRGDLSSSDVAAAIKSFAVGDDGGGDHAETTSSSTLSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGGEQVTDETKLLPQ-------STYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSPDLRHACVGLCSAVDGLIRLHDASEADFGPRDRAI 297
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A6J4K8H2_9BACT (Epimerase domain-containing protein n=1 Tax=uncultured Armatimonadetes bacterium TaxID=157466 RepID=A0A6J4K8H2_9BACT)

HSP 1 Score: 177 bits (449), Expect = 7.610e-49
Identity = 96/180 (53.33%), Postives = 120/180 (66.67%), Query Frame = 1 
Query:  451 SVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGG----EQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSV 978
            S+FHLAS++SG+ EE F +ALRVN+DG R+L +  R++GGR R VFASSIA FGG     E  TD+TKL PQ       +TYGMTKA  EL++ND TRKGF DGR ARLPTV++RPG PN AA+G  S + +  L+G     PV  D RH   G  + VD LI +HD   A  G RDR++
Sbjct:   89 SIFHLASMVSGECEERFDDALRVNLDGGRNLFEAARELGGRTRLVFASSIACFGGDAAMPEPCTDQTKLTPQ-------TTYGMTKAVCELMINDYTRKGFFDGRSARLPTVIIRPGKPNTAASGWASGMFREPLNGATCSLPVRRDQRHPMTGHRTVVDSLIAVHDLPSASIG-RDRAI 260
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A812N7H2_9DINO (DenD protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812N7H2_9DINO)

HSP 1 Score: 169 bits (429), Expect = 8.960e-46
Identity = 95/174 (54.60%), Postives = 115/174 (66.09%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQI--GG--RPRFVFASSIAAFGG--GEQ---VTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDA 942
            LS+FHLA VMSG  E+DF   L+VN+DGTR LLD CR    GG  RP+FVF SS+A FG   GEQ   V D  K++P+       +TYGMTKA  ELLVND TRKGF+DGR ARLPTV+VRPG PN A T CFS V +  LHG+  + PV+  L H+     + +  L+ LHDA
Sbjct:   85 LSLFHLAGVMSGAAEKDFDLGLKVNLDGTRHLLDACRARTEGGAARPKFVFTSSLAVFGETYGEQGRAVGDTDKIVPK-------NTYGMTKAVCELLVNDYTRKGFLDGRTARLPTVIVRPGRPNAATTSCFSGVVREPLHGEDAVLPVARTLPHSVTSTRALISNLVILHDA 251
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A2S6UCI5_9PROT (Putative epimerase/dehydratase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6UCI5_9PROT)

HSP 1 Score: 168 bits (425), Expect = 1.440e-45
Identity = 101/228 (44.30%), Postives = 133/228 (58.33%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGG---EQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSV------HAYTSLYDHFRRIP-KGSILLRAVVP----CVKKRCRDWPVA 1089
            + VFHLASV+S  GE+DF  A+RVN DG R +L+  R   G PR V ASS+A FGG    E VT+ T+++PQ       +TYGMTKA  EL++ND TRKGF+DGR ARLPTV++RPG PN AA+G  S V +  L GQ ++ PV+ D R   +G  SA+ GL  L DA     G  DR V      +A T +     R+  +  I    V P     ++   + WP+A
Sbjct:   70 IGVFHLASVVSAGGEQDFDLAMRVNFDGGRHILEALRARKGTPRIVLASSLAVFGGPDMPEAVTEMTRVVPQ-------TTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVAMDTRMMVIGARSAIAGLTGLMDADGEGLGA-DRVVNLPNNAYAVTDMIAALERVAAENGITFGPVTPKPDPAIEAIVKSWPLA 289
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A2E6QK31_9PROT (NAD-dependent epimerase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QK31_9PROT)

HSP 1 Score: 168 bits (425), Expect = 1.680e-45
Identity = 97/225 (43.11%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGG---EQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSVH------AYTSLYDHFRRI----PKGSILLRAVVPCVKKRCRDWP 1083
            +SVFHLASV+SG GE+DF  A+RVN+DG+R++ + CR+ G  PR VFAS++A FGG    + V D TK +PQ       +TYGMTKA  EL++ND TRKGF DGR ARLPTV++RPG PN A +G  S + +  L+G  ++     + R   + +  AV+G I LH+A     G  DR+V           + D  +R+    P G+I +    P V+  C  WP
Sbjct:   78 ISVFHLASVVSGGGEKDFDLAMRVNLDGSRAVFEACRKRGSTPRMVFASTLATFGGSAMPKTVGDTTKQVPQ-------TTYGMTKAACELMINDYTRKGFFDGRSARLPTVIIRPGKPNLALSGFASGIFREPLNGIDYVCAAGLETRMPVISVRMAVEGFIALHEAPGDAIG-EDRAVGLPSLSVTVAEMIDSLQRVAGDRPLGAIKVEPD-PLVESVCSTWP 293
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A4D9D647_9STRA (Epimerase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D647_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.720e-45
Identity = 96/206 (46.60%), Postives = 128/206 (62.14%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCR------QIGGRP-RFVFASSIAAFGGGEQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSVH------AYTSLYDHFRRIPKG 1026
            +++FHLASVMSG+GEE+F + + VN+DGT++LL+  R      ++G +P RFVF SS AAFG   +V+DETKL PQ       STYGMTKA  EL+VND TRKG+VDGR  RLPTV+VRPG  N A+TGCFS+V + +L G  ++ P      H  +     + GL+ L +      G  DRSV+          L  H R+I +G
Sbjct:  101 VTIFHLASVMSGEGEEEFDKCVAVNLDGTQNLLEKARALHASGRVGEKPVRFVFPSSFAAFGPHPEVSDETKLTPQ-------STYGMTKAVGELMVNDYTRKGWVDGRTGRLPTVIVRPGNKNGASTGCFSAVVRELLMGHDYVIPYDPRQTHPVISTRRTIKGLLALAEVEGESLGG-DRSVNLPALQTTMEELLFHTRQIAQG 298
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A437QH10_9PROT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QH10_9PROT)

HSP 1 Score: 166 bits (421), Expect = 7.210e-45
Identity = 98/226 (43.36%), Postives = 130/226 (57.52%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGG---EQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSVHAYTS-----LYDHFRRIPKGSILLRAVV---PCVKKRCRDWPVAG 1092
            + VFHLASV+SG GE+DF  A+RVN+DG R +L+ CR +G  PR +F SSIA FGG    + V D  K  PQ       +TYGMTKA  EL++ND TRKGF+DGR ARLPTV++RPG PN AA+  FS + +  L G     PV  D+RH  +G  + VDG++ L++A     G         TS     L D   R+     L +  V   P ++   ++WP A 
Sbjct:   80 IGVFHLASVVSGGGEKDFDLAMRVNLDGGRYVLEACRALGSAPRVLFTSSIATFGGAAMPDVVGDLVKQTPQ-------TTYGMTKAVLELMINDYTRKGFLDGRSARLPTVIIRPGKPNAAASSFFSGMFREPLAGVECKIPVPPDVRHPVIGYRTVVDGILALYEADSDAIGDDRAFTLPSTSATVAELMDALDRVAGDRPLGKRTVEPDPFIQDIVKNWPRAA 298
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A800A6L8_9PROT (NAD-dependent epimerase/dehydratase family protein (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A800A6L8_9PROT)

HSP 1 Score: 163 bits (413), Expect = 9.580e-45
Identity = 89/174 (51.15%), Postives = 112/174 (64.37%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGG---EQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFG 960
            + VFHLASV+S  GE+DF  A+RVN DG R +L+  R   G PR V ASS+A FGG    E VT+ T+++PQ       +TYGMTKA  EL++ND TRKGF+DGR ARLPTV++RPG PN AA+G  S V +  L GQ ++ PV  D R   +G  SA+ GL  L DA     G
Sbjct:   70 IGVFHLASVVSAGGEQDFDLAMRVNFDGGRHILEALRARKGTPRIVLASSLAVFGGPDMPEAVTEMTRVVPQ-------TTYGMTKAIGELMINDYTRKGFIDGRAARLPTVIIRPGAPNAAASGFASGVFREPLSGQDYVLPVVMDTRMMVIGARSAIAGLTGLMDADGEGLG 236
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A829Y6H7_9GAMM (Epimerase domain-containing protein n=3 Tax=Steroidobacter TaxID=469322 RepID=A0A829Y6H7_9GAMM)

HSP 1 Score: 166 bits (419), Expect = 1.350e-44
Identity = 96/224 (42.86%), Postives = 132/224 (58.93%), Query Frame = 1 
Query:  448 LSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGGE---QVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASEADFGPRDRSVHAYT------SLYDHFRRIPKG---SILLRAVVPCVKKRCRDWP 1083
            ++VFHLASV+S  GE+DF  A+RVN+DG R +LD  + +G RPR+VF SS+A +GG     +V D T+ +PQ       +TYGMTKA  ELLVND TRKGF+DGR ARL  V+VRPG PN AA+G  S V +  L+G+ ++ PV    + A  G  + ++GL+ LH    +  G  DRSV+  T       + +  RR+ +      +     P V K    WP
Sbjct:   79 IAVFHLASVVSAGGEQDFELAMRVNLDGHRYVLDALKALGSRPRYVFTSSLAVYGGDSALREVDDPTRHIPQ-------TTYGMTKAIGELLVNDYTRKGFIDGRSARLGFVIVRPGAPNRAASGFASGVLREPLNGEDYVCPVPFTTKVAATGYRTVIEGLLALHAVDGSKLGA-DRSVNLRTRTVTVGEMIESLRRVARDRKLGAISEQPDPFVMKVISAWP 294
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BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Match: A0A7S3Y5M2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5M2_HETAK)

HSP 1 Score: 162 bits (410), Expect = 6.710e-44
Identity = 113/281 (40.21%), Postives = 151/281 (53.74%), Query Frame = 1 
Query:  118 VLSGGLGLLGQRVLQHIVSSGHGCVRVMIVDTAPVQAAKSSGPPTAASGITXXXXXXXXXXGEVLGSSTARGAVSV--VRGDLSCSDVAAAIKSFAGGDDGGGDHAETASSTLSVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSIAAFGGGEQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGF--VDGRIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVGLSSAVDGLIRLHDASE 948
            +++GG GLLG R+ + I+S      R M+     +   +                      G  LGS  ++  +SV  V GD+ CSDV+ +            D + +    LSVFHLAS+MSG+GEE   E   VN++GTR LL  CR+     +F+FASSIAA G        T LL +A     +STYG TKA AELLV D  R+    VDGR+AR+PTV VRPGPPN A+T  FS+V KA+  GQ F SP+  DL+H  +   +A+   I+LHD  E
Sbjct:    5 LITGGKGLLGSRLCREIISK-----RSMLAADGVISPVEK----------IILWDRAVDAGGGGLGSCRSKDGISVQEVHGDI-CSDVSVSTLF---------DQSISDQMPLSVFHLASMMSGEGEEKADECFEVNVNGTRRLLGACRRRAAPTKFLFASSIAAAG-------PTPLLSRATRPRPESTYGTTKAMAELLVVDHGRRAAWGVDGRVARVPTVAVRPGPPNAASTAAFSNVVKALAQGQDFSSPLPLDLKHPLISYKNAISCFIQLHDLEE 253
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig994.21590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ49_ECTSI6.060e-16986.18NAD-dependent epimerase/dehydratase n=1 Tax=Ectoca... [more]
A0A6J4K8H2_9BACT7.610e-4953.33Epimerase domain-containing protein n=1 Tax=uncult... [more]
A0A812N7H2_9DINO8.960e-4654.60DenD protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A2S6UCI5_9PROT1.440e-4544.30Putative epimerase/dehydratase n=2 Tax=Alphaproteo... [more]
A0A2E6QK31_9PROT1.680e-4543.11NAD-dependent epimerase n=1 Tax=Rhodospirillaceae ... [more]
A0A4D9D647_9STRA4.720e-4546.60Epimerase domain-containing protein n=3 Tax=Monodo... [more]
A0A437QH10_9PROT7.210e-4543.36NAD-dependent epimerase/dehydratase family protein... [more]
A0A800A6L8_9PROT9.580e-4551.15NAD-dependent epimerase/dehydratase family protein... [more]
A0A829Y6H7_9GAMM1.350e-4442.86Epimerase domain-containing protein n=3 Tax=Steroi... [more]
A0A7S3Y5M2_HETAK6.710e-4440.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig994contigEcto-sp13_S_contig994:14630..19707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score491.9
Seed ortholog evalue2.7e-136
Seed eggNOG ortholog2880.D7FZ49
Model size1134
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.L-threonine 3-dehydrogenase activity
EggNOG OGsCOG0451@1,KOG2774@2759
Ec32 ortholog descriptionNAD-dependent epimerase/dehydratase, N-terminal domain
Ec32 orthologEc-02_006280.1
Cds size1134
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig994.21590.1prot_Ecto-sp13_S_contig994.21590.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig994 14630..19707 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464254.5463457-CDS-Ecto-sp13_S_contig994:14629..149171681464254.5463457-CDS-Ecto-sp13_S_contig994:14629..14917Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 14630..14917 -
1681464254.5700717-CDS-Ecto-sp13_S_contig994:15517..156321681464254.5700717-CDS-Ecto-sp13_S_contig994:15517..15632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 15518..15632 -
1681464254.587997-CDS-Ecto-sp13_S_contig994:16235..162911681464254.587997-CDS-Ecto-sp13_S_contig994:16235..16291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 16236..16291 -
1681464254.6006002-CDS-Ecto-sp13_S_contig994:16630..167761681464254.6006002-CDS-Ecto-sp13_S_contig994:16630..16776Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 16631..16776 -
1681464254.6176775-CDS-Ecto-sp13_S_contig994:17769..182101681464254.6176775-CDS-Ecto-sp13_S_contig994:17769..18210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 17770..18210 -
1681464254.6284022-CDS-Ecto-sp13_S_contig994:19195..192391681464254.6284022-CDS-Ecto-sp13_S_contig994:19195..19239Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 19196..19239 -
1681464254.657648-CDS-Ecto-sp13_S_contig994:19663..197071681464254.657648-CDS-Ecto-sp13_S_contig994:19663..19707Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig994 19664..19707 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig994.21590.1

>prot_Ecto-sp13_S_contig994.21590.1 ID=prot_Ecto-sp13_S_contig994.21590.1|Name=mRNA_Ecto-sp13_S_contig994.21590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
CTRSRASPVTQATALSSDEAIQRNIYAGVGVSSSIMQKFVLSGGLGLLGQ
RVLQHIVSSGHGCVRVMIVDTAPVQAAKSSGPPTAASGITGDPAVGNGAN
GEVLGSSTARGAVSVVRGDLSCSDVAAAIKSFAGGDDGGGDHAETASSTL
SVFHLASVMSGQGEEDFGEALRVNIDGTRSLLDTCRQIGGRPRFVFASSI
AAFGGGEQVTDETKLLPQAMMNLTQSTYGMTKACAELLVNDCTRKGFVDG
RIARLPTVVVRPGPPNPAATGCFSSVPKAVLHGQHFISPVSHDLRHACVG
LSSAVDGLIRLHDASEADFGPRDRSVHAYTSLYDHFRRIPKGSILLRAVV
PCVKKRCRDWPVAGPELSMLSHSERTE*
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mRNA from alignment at Ecto-sp13_S_contig994:14630..19707-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig994.21590.1 ID=mRNA_Ecto-sp13_S_contig994.21590.1|Name=mRNA_Ecto-sp13_S_contig994.21590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5078bp|location=Sequence derived from alignment at Ecto-sp13_S_contig994:14630..19707- (Ectocarpus species13 EcNAP12_S_4_19m)
TGTACACGCAGTAGGGCCTCGCCAGTTACACAAGCAACAGCATTGTGTGT
GCAGGTGAGGAAGCAACAACGGGGCGGGGTTGGTGGTGGTGGTCGGATAC
AAAATGAGTGTCCACCGACGCTGTGAATCCCAGACTCATTACTACCTACA
GCTATTCTGTGGAGAAGGTGGAGTTTTATCAAAGATTACATCTATCTCAG
CCGAGTCTTACAGTCATAGAATTTACAGCGTGGTATTTGTTTCCTACGCT
TGCTTACTACGCATGCGTAGTTGCAGAAGAAAGACATGTCCGCTCCTCTC
GATAGATGTGACTGAAAAAAAAGCTACGTTGTTTCGGATTGTTGGGGCGC
AGCGCGCAGCGGGACAAGACAGACTTTAAATTTTTTCACATAAACGTTGT
CCTTGCTTGTAGAAGAGGTGCAGTTCAATTCACTGCTGTTGTTCACTGCT
GCTCTCTACCGGTGCCAGGTCCAGCGACGAGGCTATCCAACGGAATATAT
ATGCAGGCGTGGGTGAGACTGCTTTCCTGCTCATCATGTCGAATATTTGG
CGTTGCGACAGCGCTTTTGCCCCACCCAGCGTGCACGCGGCGAGGGAGTG
TCGTCCAAATGCCGCTGTGCATAGATAGGCGATGTCGTTTGCGTAGACAC
CATCATACCCGCCCCAGACCGATAGTTAAAGCTCGACTACCAGACGACGA
AGAGGATGTCAATGCTCTTTTACAATAAAATGGTACGTTATTGGAAGGGT
CTCAAGAGGATGGTTCCAATGCCGACATTTTCCCCACCGTGACTTTCTGC
GAGCTTTGAACATTGGTCCCGGGGGGCGCGGATGGTATCTTACGCAACCA
TCGGAACATACATGCCGCTATCTTCTGCTCATGAGCGACGAGCAACAAAC
TGAACACGCCACGAACTGCTGTTGTTCCTGCCAGGCTGACCATCTACTGT
TGGCATCCCACACTGCAAACTGAATTGACGATCATGTTGATTGGTAGTCT
CCGCCCACGCATGTATGTGACCGATGATGTTCAAGAACGAGTTTTATCAT
TGGGTGTATGCATACGGTGCATGATCATGTACCTACCCTAGGTGTGGCAA
CAAGTAAAAGTGGTATTGCACACCATATATGCAAACAACTATTGCAGTAC
ACCCGTACGACCTACCACGTGCACGTCGACCTACACATCTTGTTGTCCCT
ATAGACTACAAGAGGGTTTGGCCGCCGCCCCCCAATGGGGCGGGGGCGGG
CGGCCAGGATGAGACGGATGGCCGCGAGGGTTTGAGAGGAAGTGAAGTAC
CAACAACAGTGGTAGACGACAGAGCACCGCCTGTTGTAGCGCAGTGACAT
GAACGCAAGGGGACTGCTGCAGCATCTCTTCGAAAACCCTCAGGATGAGT
TCACCGGAGACGTGAGTAGATCGCTGCATGAAAAATCGAAAGGCAGCAAT
AGCAGCAACAACAACATCAACATCAACAACAATGACGAATAACGCAGGTG
TGTCGAGCAGCATCATGCAGAAATTCGTTTTATCGGGAGGCTTGGGACTT
TTGGGGCAACGAGTCCTGCAGCACATTGTTTCCTCGGGCCATGGATGCGT
TCGCGTCATGATTGTCGACACCGCTCCCGTACAAGCAGCCAAGTCTAGTG
GCCCTCCTACGGCTGCATCTGGCATCACCGGTGATCCTGCGGTTGGTAAT
GGTGCGAACGGCGAGGTTCTGGGGTCCTCAACTGCTCGCGGTGCTGTGTC
GGTTGTGCGGGGTGATCTCAGCTGCAGCGACGTCGCGGCCGCCATCAAGA
GCTTCGCCGGTGGTGATGATGGTGGTGGTGACCATGCCGAGACGGCGTCA
TCAACGCTTTCCGTTTTCCACCTAGCGTCCGTGATGAGTGGTCAAGGGGA
GGAGGACTTCGGGGAGGCCCTGCGCGTCAACATCGACGGTGTGTGCAGTG
TACCGCATGCGAATACAGAGTCTGGAGCGGACGCCGTAGGCAGAAGAACT
AAAGTCTTCGTGCGAGATTCAACATTGCTTGTTTATTTGCTGATTCTTAT
CTGTGAATACAGTTGTAGAGTTGTGTTCTTCCTGCAGTAAATTGATGGAT
GACATGCATTAATGCCGAAAAGCTTCAACTTGTACAGCACCGAGTAAATT
GAATGCTGCTCGAGGCCCGACTACAGTAAGTCAGTTTGTGTTGATTCATG
GTGTCGTCATGGTCGAAGTTACTGCTGCCGCTATTGCCGGGGTAATATTA
TTAGCAGCGTGCAAGGAAAGCGATCTTCGCACCACTCTCTGTGTCTCCGT
GTGCAACAGTTGGCACTCCAAGAGGCCTACCTCAAGACCTTCAACGCTTT
TTATTGTAGAAGGTCTGCCGTCTTGGTGTGGGGTCTGCCGTGTTCTAGTC
GTCTTCTACCACCTACCTTTTCTCCTGGTGAAGACGGCTGATGTACAATG
AAATGTCGTAGTCGATTGAGATACTTATCGGAGAAAGTTGTCGAGGCGCC
CAAGGCTGCTTCAGCCTGTCTTTACCTCGGCGTGCTCGAAGACATGCAAC
CGTCGCACCGCCTTGTCACGGCTACTGGTTACTGGTGTGTTAACTGCTGC
AGTCAAACAAGATGGCCTCGTTCGTACCATGAACGTCCGCGTGTTTGGGT
CTGACGTATGGGCCTATTGCAGTACAACAGTTCACCCCCTCCGGCTCAAG
TTTGGGCAACGGTGATTGGTTCTGCGGGAACAACGCTCCGTCGCTTTTCC
CCTTGACGGTGACTTTCCTGCCATCCTTGTATCAAACCCTTGCGGACGCC
AACGAAGACGAAATTGTGGGCTACACACAACCTGAATGCGGCTGGCTATA
GATTTTTTGCCTGACCCTTCGATTGCACGCTGTCGTTTTTGTTGCCGCTG
TTGCTTTCGTCATGTGAAATGGCCAAGCCAGGCACGAGATCGCTCCTGGA
CACGTGTCGCCAGATCGGGGGCAGGCCACGGTTTGTGTTCGCGAGCTCTA
TCGCCGCGTTCGGCGGAGGCGAGCAAGTCACCGACGAAACGAAGCTCCTC
CCTCAGGCAATGATGAACCTCACCCAAGTAGTGTGACGACCATGGCACCG
ACATGAGACTACTTGGAATTAGACAGCCAAAAAGTCGCCCTCACCTCTCT
TTTACAGCAGTACCACTGTAAGGATGATAACATAGGGGTGATCATTACCG
CACCGAGAGACAAAACAGTCAACACCAAACAGTGATCCGTACGGGACCAA
GACCGGTGTATAGTACAAAACTCCGAAACCAAGAGATACTTGCCCCAAGG
GCAGAGTGTAGCGGTGTCGGTGCTGTGGCACATACCTGTTTCCAAACAAA
CGCTGCTCGCCCTACTCGCGCGAACGTCTTGTTGCGTGGCCTACACTTGA
CTGGGTCCGGGAATAGTCAACCTATGGCATGACCAAGGCCTGCGCCGAGC
TTCTCGTCAACGATTGCACAAGGTAATATTAAGTTATTGAGGTGGCTGGC
TTGTAGCGGCTTTGTCTTGGGTGAAGTGCAAGCACGGAAGACACTTGCTG
GATAATTTGATACTTGTAGCCATTGCGGAGATCGGTCCTCGACGTAGATT
CAAGCTCCCAAGTTCATGAACGATGCAAAAGTGTGTAGTGTGTGCCTCCA
TAGTTATGTCAGGACCCTGTCGTGGTTACAGGTGTGCCAAGTGTGTGGAC
CGGGGTACCGCCGTTTGGACGAAACGCGCGCATGGGTCAGCACTTGTCCA
TACCGGCTTCAGCCTTCCGTTGTTGAGCCAACTTTGCGCAATACGGCCGC
ACGGTGACCTTCTCACGTAGAAGACGTCTCCTCCTCCTTATGTTTTCTAC
TGCCGTACGCTTGGCATGAAGATTCTATTGAGGTACATCCCGCCCGAATT
TTCGCTTGTAAGAAGCATGCATATCACTTCTGCTTTCTCCCGTCTTCGCA
CTGTCCCCCCCCCCCCCGCTACCAAGCTCTTCGTTCGTCGTCAAAGCGTC
TTGATATTTGGTAAACGATTTTCCTTCTGTTCCGTCCGGTGCTTGCATTT
GTTGGTGTGTGTATCCTCCTCCCAGAAAAGGGTTCGTCGATGGCCGGATA
GCCCGCCTGCCTACGGTCGTTGTACGCCCAGGTCCTCCCAACCCGGCTGC
CACGGGGTGCTTCAGCTCGGTGCCGAAAGCCGTGTTGCACGTGAGGCCGC
CGCGCTTGACGTGTCGCGACTTGCATGGCGAATGTTATTACGTTATCCCT
TCTTGACGATGGTGATCGACGATGGTGATCGGGAGTAGGTGTATTTGTCG
TCTGGGAAGGGTCCGCTCGCTTTCAAGCGATCATTTGTGTGTCTGCAGAA
CTTGGTTGATGTTGTGGTAGCCGGCTGCTGTAGATGCTTGGAGTCGCTCT
CCGTTCGAACCCTGGGCACCATCCCTTACTTTGCACCGGTGTCGATTCGT
TTGCATTGAGCATATCGTTTGGTGATACTAGCCACGACTGTGCGAGCATT
CCACAGACCCGCTGCGAGAACAGTCTGGGCAACTCGAGCCAAGTGCATGC
TGTCGGACCAAGAACTAACTCTGTGTACAGCGATGATAGGCCTGGTTTGA
CGACCCCTAGCGTCGGGAGGGAGGGCAGGTCGCTATTGTGGGTATAGCGG
CTACTCGTGGTGGTGTAGCCAAGGTCAAGGGTAGCCCTGTCTGCGTGTGC
CCGATGACCTGCCCCACGCCCTTTTTCGCCTTGCCTACACCGTACTGCTA
CCACCCCCGCCGCCGCCGCCGCCACAACCACCAACGACAGGGGCAACACT
TCATTTCGCCGGTGTCCCATGATCTCCGACACGCCTGCGTTGGTCTCTCT
TCGGCCGTAGATGGCTTGATCCGTTTGCATGACGCATCGGAAGCAGACTT
CGGGCCGAGAGATCGGTCAGTGCACGCGTACACCTCTCTGTACGATCACT
TTCGGAGGATCCCTAAGGGGTCAATTCTCCTTCGTGCCGTTGTGCCGTGC
GTAAAGAAGCGTTGCCGTGATTGGCCAGTCGCAGGACCGGAACTCTCGAT
GCTTTCTCACTCGGAGCGAACGGAATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig994:14630..19707-

>mRNA_Ecto-sp13_S_contig994.21590.1 ID=mRNA_Ecto-sp13_S_contig994.21590.1|Name=mRNA_Ecto-sp13_S_contig994.21590.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig994:14630..19707- (Ectocarpus species13 EcNAP12_S_4_19m)
TGTACACGCAGTAGGGCCTCGCCAGTTACACAAGCAACAGCATTGTCCAG
CGACGAGGCTATCCAACGGAATATATATGCAGGCGTGGGTGTGTCGAGCA
GCATCATGCAGAAATTCGTTTTATCGGGAGGCTTGGGACTTTTGGGGCAA
CGAGTCCTGCAGCACATTGTTTCCTCGGGCCATGGATGCGTTCGCGTCAT
GATTGTCGACACCGCTCCCGTACAAGCAGCCAAGTCTAGTGGCCCTCCTA
CGGCTGCATCTGGCATCACCGGTGATCCTGCGGTTGGTAATGGTGCGAAC
GGCGAGGTTCTGGGGTCCTCAACTGCTCGCGGTGCTGTGTCGGTTGTGCG
GGGTGATCTCAGCTGCAGCGACGTCGCGGCCGCCATCAAGAGCTTCGCCG
GTGGTGATGATGGTGGTGGTGACCATGCCGAGACGGCGTCATCAACGCTT
TCCGTTTTCCACCTAGCGTCCGTGATGAGTGGTCAAGGGGAGGAGGACTT
CGGGGAGGCCCTGCGCGTCAACATCGACGGCACGAGATCGCTCCTGGACA
CGTGTCGCCAGATCGGGGGCAGGCCACGGTTTGTGTTCGCGAGCTCTATC
GCCGCGTTCGGCGGAGGCGAGCAAGTCACCGACGAAACGAAGCTCCTCCC
TCAGGCAATGATGAACCTCACCCAATCAACCTATGGCATGACCAAGGCCT
GCGCCGAGCTTCTCGTCAACGATTGCACAAGAAAAGGGTTCGTCGATGGC
CGGATAGCCCGCCTGCCTACGGTCGTTGTACGCCCAGGTCCTCCCAACCC
GGCTGCCACGGGGTGCTTCAGCTCGGTGCCGAAAGCCGTGTTGCACGGGC
AACACTTCATTTCGCCGGTGTCCCATGATCTCCGACACGCCTGCGTTGGT
CTCTCTTCGGCCGTAGATGGCTTGATCCGTTTGCATGACGCATCGGAAGC
AGACTTCGGGCCGAGAGATCGGTCAGTGCACGCGTACACCTCTCTGTACG
ATCACTTTCGGAGGATCCCTAAGGGGTCAATTCTCCTTCGTGCCGTTGTG
CCGTGCGTAAAGAAGCGTTGCCGTGATTGGCCAGTCGCAGGACCGGAACT
CTCGATGCTTTCTCACTCGGAGCGAACGGAATAG
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