mRNA_Ecto-sp13_S_contig9938.21586.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9938.21586.1
Unique NamemRNA_Ecto-sp13_S_contig9938.21586.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 4.440e-160
Identity = 224/231 (96.97%), Postives = 226/231 (97.84%), Query Frame = 1
Query:    1 NLVTPVDTSADVDVFFIDMDAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNLGNSVCDEANALGLDTILKNYDLDAAFCSCVDPSRDVDCMH 693
            NL TPVDTSADVDVFFIDMDAGQ VIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVY EGSSTGVSVSEAEQIEYNSWFADIVHA GMGVGLKNAVELVPILVNKFDFALNEECHEWNEC VYEDTFLAEGKPV+NVEYNLGNSVCDEANALGLDTILK+YDLDAAFCSCVDPSRDVDCMH
Sbjct:  154 NLRTPVDTSADVDVFFIDMDAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYTEGSSTGVSVSEAEQIEYNSWFADIVHAYGMGVGLKNAVELVPILVNKFDFALNEECHEWNECNVYEDTFLAEGKPVYNVEYNLGNSVCDEANALGLDTILKSYDLDAAFCSCVDPSRDVDCMH 384          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: D7FRL2_ECTSI (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.870e-67
Identity = 123/229 (53.71%), Postives = 149/229 (65.07%), Query Frame = 1
Query:    1 NLVTPVDTSADVDVFFIDMDAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNLGNSVCDEANALGLDTILKNYDLDAAFCSCVDPSRDVDC 687
            NL TPV+T  DVDVFFID+D  Q  IDELH KGK V CYIS+GTVE WR+D   FPSS +G      +GE W+D+  + VREIM  RV+ A+S  CDAVEPDN+ V+ E  S G ++S+ EQI YN W A++V  NGM VGLK    L+      +DFA             Y+  FL+EGKPVFNVEY+     CD +NALG+DTI KNYDL A  CSC +PSRD DC
Sbjct:  186 NLDTPVNTDVDVDVFFIDLDVAQDTIDELHGKGKYVSCYISVGTVESWREDVGVFPSSVVGTASGDDSGENWIDITQESVREIMEDRVKKAASKGCDAVEPDNISVWNEQDS-GFTISKDEQISYNKWVAELVQENGMKVGLKAGHSLIEDTSMYYDFA------------AYQIPFLSEGKPVFNVEYSKDYGGCDGSNALGIDTIFKNYDLKAPMCSCANPSRDHDC 401          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT)

HSP 1 Score: 197 bits (502), Expect = 8.110e-59
Identity = 105/220 (47.73%), Postives = 141/220 (64.09%), Query Frame = 1
Query:   13 PVDTSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEY---NLGNSVCDEANALGLDTILKNYDLDAAFCSC 660
            P+D S DVD++ ID+ DA Q VID L  +G  V+CY S G+ EDWR+DA +FP +A+G  + GW GE+W+D+   DVR IM AR++ A +  CD VEPDN+  Y   S  G  ++ A Q++YN + A   HA G+ VGLKN +E V  L+  FD+AL+EEC +W+EC +    F+A GK VF VEY   +L   VC  ANAL  DT++K  DLDA    C
Sbjct:  115 PIDDSLDVDMYDIDLFDAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYANDS--GFPLTAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALDEECFQWDECDLLRP-FVAAGKAVFQVEYGDASLAADVCPRANALDFDTLIKRLDLDAWRIPC 331          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: Q098C2_STIAD (Endo alpha-1,4 polygalactosaminidase precusor n=2 Tax=Stigmatella aurantiaca TaxID=41 RepID=Q098C2_STIAD)

HSP 1 Score: 192 bits (487), Expect = 9.060e-57
Identity = 98/217 (45.16%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   22 TSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYN---LGNSVCDEANALGLDTILKNYDLDAAFCSC 660
            T  +V V+ +D+ D     +  L  +G+ V+CY S G+ EDWR DAK FPS+ +G  + GW GE+W+D+    VR+IM +R+E+A    CDAV+PDN+  Y   ++TG  ++ A+Q+ +N + A   H+ G+ VGLKN V+ V  LVN FDF +NEEC +++EC      F+  GK VF++EY    L  SVC EANALG DT++KN +LDAA  SC
Sbjct:  101 TGFNVPVYDVDLFDTPTATLTALKSQGRKVICYFSAGSYEDWRPDAKSFPSAVLGKALDGWPGERWLDIRATSVRDIMRSRIELARQKGCDAVDPDNVDGY--SNNTGFRLTSADQLAFNRFLASEAHSRGLAVGLKNDVDQVTQLVNDFDFQVNEECLQYDECDTLRP-FITAGKAVFHIEYGGAALAQSVCPEANALGFDTLVKNLELDAARISC 314          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE)

HSP 1 Score: 188 bits (478), Expect = 1.810e-56
Identity = 99/223 (44.39%), Postives = 139/223 (62.33%), Query Frame = 1
Query:    4 LVTPVDTSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEY---NLGNSVCDEANALGLDTILKNYDLDAAFCSC 660
            L   +DTS DV ++ ID+ +A Q  ID L   GK V+CY S G+ EDWR DA  FP++A+G  + GW GE+W+D     VR++M AR+++A    CD VEPDN+  Y  GS  G  ++ A Q++YN + A   HA G+ +GLKN ++ V  LV  FD+ALNEECH ++EC +    F+  GK VF+ EY   +  N+VC +   LGL T++K  DLDA   +C
Sbjct:   12 LTGTIDTSLDVAMYDIDLFEAPQATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYTNGS--GFPLTAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDECEMLTP-FIRAGKAVFHAEYVAASQANAVCADTKPLGLSTLIKRLDLDAWRVAC 231          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A7X9IZM4_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9IZM4_9DELT)

HSP 1 Score: 190 bits (482), Expect = 8.580e-56
Identity = 101/223 (45.29%), Postives = 140/223 (62.78%), Query Frame = 1
Query:    4 LVTPVDTSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYN---LGNSVCDEANALGLDTILKNYDLDAAFCSC 660
            L   +D S DV+++ ID+ +A Q VID L  +G  V+CY S G+ E+WR+DA +FP++A+G  + GW GE+W+D+   DVR IM AR++ A +  CD VEPDN+  Y   S  G  +  A Q++YN + A   HA G+ VGLKN +E V  L+  FD+ALNEEC +W+EC +    F+  GK VF VEY    L  ++C  ANAL  DT++K  DLDA    C
Sbjct:  114 LTGTIDDSLDVEMYDIDLFEAPQAVIDGLRARGVVVICYFSAGSREEWREDAGDFPAAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYANDS--GFPLIAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALNEECFQWDECDLLRP-FVVAGKAVFQVEYGDAGLAGTICPRANALDFDTLIKRLDLDAWRIPC 333          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A1I0KAA5_9DELT (Glyco_hydro_114 domain-containing protein n=3 Tax=Stigmatella TaxID=40 RepID=A0A1I0KAA5_9DELT)

HSP 1 Score: 187 bits (475), Expect = 2.080e-55
Identity = 96/217 (44.24%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   22 TSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYN---LGNSVCDEANALGLDTILKNYDLDAAFCSC 660
            TS +V V+ +D+ D     ++ L  +G+ V+CY S G+ E+WR DA  FP++A+G  + GW GE+W+D+ +  VR+IM  R+E+A    CDAV+PDN+  Y   ++TG  ++ A+Q+ +N + A   HA G+ VGLKN V  V  LVN FDF +NEEC +++EC      F+A GKPVF++EY    L   +C +ANAL  DT++KN DLDA   SC
Sbjct:   65 TSFNVAVYDVDLFDTPVSTLNALKAQGRKVICYFSAGSYENWRSDAGSFPAAALGNALDGWPGERWLDIRNTKVRDIMRTRIELARQKGCDAVDPDNVDGY--ANATGFKLTSADQLSFNRFLATEAHARGLAVGLKNDVGQVAQLVNDFDFQVNEECFQYDECEELLP-FIAAGKPVFSIEYGGNALAQQICPQANALNFDTLVKNLDLDAPRISC 278          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A1I4UB85_9PROT (Glyco_hydro_114 domain-containing protein n=1 Tax=Nitrosomonas communis TaxID=44574 RepID=A0A1I4UB85_9PROT)

HSP 1 Score: 186 bits (473), Expect = 2.320e-55
Identity = 101/215 (46.98%), Postives = 142/215 (66.05%), Query Frame = 1
Query:   16 VDTSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNLG--NSVCDEANALGLDTILKNYDLDAAF 651
            V+TS D  V+ ID+ D+ Q +ID+LH KG  VVCY S G+ E+WR+DA +FP + +G   +GWAGE+W+D+   +VR IM AR+ +A S  CDAVEPDN+  Y   + TG  ++  +QI+YN + A   H  G+ VGLKN +E +  L+  FDFA+NEECH + EC V +  F+ +GK VFNVEY     + VC +++ALGL TI    +LD +F
Sbjct:   41 VNTSYDAAVYDIDLFDSPQSLIDDLHAKGIAVVCYFSAGSWENWREDADQFPENVLGR-KNGWAGERWLDIRSNEVRSIMAARIGLARSKGCDAVEPDNVDGY--SNKTGFPLTYQDQIDYNRFLAMAAHTLGLKVGLKNDLEQINDLIGDFDFAINEECHRYRECDVLKP-FIDQGKAVFNVEYRTTKQDKVCAQSSALGLSTIFLPLELDDSF 251          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A4R4TGP2_9ACTN (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Streptomyces hainanensis TaxID=402648 RepID=A0A4R4TGP2_9ACTN)

HSP 1 Score: 186 bits (472), Expect = 7.180e-55
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 1
Query:    4 LVTPVDTSADVDVFFID-MDAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVRE-IMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNLGNS-VCDEANALGLDTILKNYDLDAAFCSC 660
            L+  VDTS DV V+ ID  +    V+ ELHD G+ V+CYIS+G  EDWR DA EFP   +G + +GW GE+W+D+   DV E +M AR +M +    DA+EPDN+  +   + TG  +S  +Q+ +N   AD+ H  G+ VGLKN +E +P LV+ FDFA+NEEC EW EC      F+  GK VF+VEYN+     C    ALGL ++LK+YDLD    +C
Sbjct:   67 LLGTVDTSIDVPVYDIDGFENDADVVAELHDAGRRVICYISVGAWEDWRPDAGEFPEEILG-EPNGWPGERWLDIRALDVLEPLMAARFDMCAERGYDAIEPDNVDNF--ANETGFDISADDQLAFNRMIADLAHERGLSVGLKNDLEQIPELVDDFDFAVNEECFEWEECEALTP-FIEAGKAVFHVEYNVPTEEFCPTTTALGLSSMLKSYDLDVWRETC 284          
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Match: A0A3M1CLR0_9DELT (Endo alpha-1,4 polygalactosaminidase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1CLR0_9DELT)

HSP 1 Score: 184 bits (466), Expect = 3.840e-54
Identity = 97/219 (44.29%), Postives = 141/219 (64.38%), Query Frame = 1
Query:   16 VDTSADVDVFFIDM-DAGQVVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVPILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEY---NLGNSVCDEANALGLDTILKNYDLDAAFCSC 660
            ++TS  V+++ ID+ D  Q VIDELH  G+ V+CY S G+ E+WR DA  FP  AIG  +  W GE+W+D+ +Q VR+IM  R+ +A S  CD V+PDN+  Y   + TG +++ A+Q++YN + A   HA G+ VGLKN V+ +  LV+ FD+ LNEEC +++EC      F+  GK VF +EY   +L + +C  ANA+  DT++K  DLDA   SC
Sbjct:   56 IETSFVVEMYDIDLFDVPQSVIDELHRDGRVVICYFSAGSWEEWRPDADRFPQEAIGNRLDNWPGERWLDIRNQAVRQIMVERMRLAVSKRCDGVDPDNVDGY--SNDTGFALTFADQLDYNRFLAGQAHALGLAVGLKNDVDQIEQLVDDFDWQLNEECFQYDECDRLLP-FIQAGKAVFQIEYGGQSLADRICPRANAMNFDTLIKRIDLDAWRISC 271          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9938.21586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ77_9PHAE4.440e-16096.97Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
D7FRL2_ECTSI1.870e-6753.71Endo alpha-1,4 polygalactosaminidase precusor n=1 ... [more]
A0A7V4LGC7_9DELT8.110e-5947.73Endo alpha-1,4 polygalactosaminidase n=1 Tax=Delta... [more]
Q098C2_STIAD9.060e-5745.16Endo alpha-1,4 polygalactosaminidase precusor n=2 ... [more]
A0A150SSH0_SORCE1.810e-5644.39Endo alpha-1,4 polygalactosaminidase n=3 Tax=Soran... [more]
A0A7X9IZM4_9DELT8.580e-5645.29Endo alpha-1,4 polygalactosaminidase n=1 Tax=Myxoc... [more]
A0A1I0KAA5_9DELT2.080e-5544.24Glyco_hydro_114 domain-containing protein n=3 Tax=... [more]
A0A1I4UB85_9PROT2.320e-5546.98Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A4R4TGP2_9ACTN7.180e-5545.95Endo alpha-1,4 polygalactosaminidase n=1 Tax=Strep... [more]
A0A3M1CLR0_9DELT3.840e-5444.29Endo alpha-1,4 polygalactosaminidase (Fragment) n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9938contigEcto-sp13_S_contig9938:4041..6091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score459.9
Seed ortholog evalue7e-127
Seed eggNOG ortholog2880.D7FPZ5
Model size696
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Endo alpha-1,4 polygalactosaminidase
EggNOG OGs2RCTR@2759,COG3868@1
Cds size696
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464254.2675738-CDS-Ecto-sp13_S_contig9938:4040..41091681464254.2675738-CDS-Ecto-sp13_S_contig9938:4040..4109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9938 4041..4109 -
1681464254.279342-CDS-Ecto-sp13_S_contig9938:4368..45741681464254.279342-CDS-Ecto-sp13_S_contig9938:4368..4574Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9938 4369..4574 -
1681464254.2892997-CDS-Ecto-sp13_S_contig9938:4849..49731681464254.2892997-CDS-Ecto-sp13_S_contig9938:4849..4973Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9938 4850..4973 -
1681464254.2989674-CDS-Ecto-sp13_S_contig9938:5406..56451681464254.2989674-CDS-Ecto-sp13_S_contig9938:5406..5645Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9938 5407..5645 -
1681464254.308746-CDS-Ecto-sp13_S_contig9938:6033..60911681464254.308746-CDS-Ecto-sp13_S_contig9938:6033..6091Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9938 6034..6091 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9938.21586.1prot_Ecto-sp13_S_contig9938.21586.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9938 4041..6091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9938.21586.1

>prot_Ecto-sp13_S_contig9938.21586.1 ID=prot_Ecto-sp13_S_contig9938.21586.1|Name=mRNA_Ecto-sp13_S_contig9938.21586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
NLVTPVDTSADVDVFFIDMDAGQVVIDELHDKGKGVVCYISIGTVEDWRD
DAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVE
PDNMMVYMEGSSTGVSVSEAEQIEYNSWFADIVHANGMGVGLKNAVELVP
ILVNKFDFALNEECHEWNECVVYEDTFLAEGKPVFNVEYNLGNSVCDEAN
ALGLDTILKNYDLDAAFCSCVDPSRDVDCMH*
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mRNA from alignment at Ecto-sp13_S_contig9938:4041..6091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9938.21586.1 ID=mRNA_Ecto-sp13_S_contig9938.21586.1|Name=mRNA_Ecto-sp13_S_contig9938.21586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2051bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9938:4041..6091- (Ectocarpus species13 EcNAP12_S_4_19m)
AATTTGGTGACACCAGTCGACACATCCGCGGACGTCGACGTCTTCTTCAT CGACATGGGTAAGTGGGGCGCAGCAGCAGTGGCCGTATCTGTGCGTCAAG TAAAGGCTTTAGGATGATATTGTCAGGGCTGCCGTACAAGCAACAGTCTG CCGTGGTCTTGTCTTGTTGCCTCGAGCTTCGTATGCATCCTTGGGGTGGG TAGACTGTTCTCTGTTTTGTACCATGTGTTTTTTCCAGGCCGCAGTGCGC AGTCTTCGACCTCGTACCCCATGCCTGTTCCATCAGTTCTTGCAAAAGGC TGCTCGTTTTTGGCTATTGCATAAGATCGAGAGTAGTGTACACAGGAGAC ACTCGACGACATGTGCTTTAATATTTTACCATACTCACCAACTGTACTCA CGAACTCGTTTTGTGGAACGTCCACCCCGTTCCTCTTGCTTCTTAGACGC TGGCCAGGTCGTCATCGACGAGCTACACGACAAGGGCAAGGGGGTGGTTT GCTACATCTCCATCGGCACGGTTGAGGACTGGCGTGACGACGCGAAGGAA TTCCCGTCCTCGGCGATCGGCGGGGACGTCTCCGGGTGGGCGGGCGAAAA GTGGGTCGACGTGAACGACCAGGATGTTCGTGAGATCATGACCGCCCGAG TGGAGATGGCGTCCAGCATGAACTGCGACGCTGTGGTGAGTACAGCTAGT GATCGTTTGTTCGCCCTGCAGCCACGTTCAAGGTATCTTTCCGATTTTGC AGTGTAGAGGATACGGAAAATGGATTCTCGCTCCCGTCGAAACGTGGGAC CCGTGCACCGGCCGTTACTTTCTTCGAAAAAGATGCCGGCATGCGCACAC ACTGTCGCGTAGACTGCTAGGTGTTGTGCTGACCTGTACTGGATGTGGTC GTTTGTGGTTCATATTATACGCAGTTAAGTCTAGAATCTGCCGTTCCCAT AAATACTGGGCGTCAGTTTTTGGCCTTTCTGTTTGTTTTCTTGACGCATT CCAGCCCGGGTCGCACAGGGCGAAGTGCGACATGAAACGCATTTATGTCA CGTTGCTAAACCACACTGGCCCACCGTACACCCTCTTCCGTCCCCGTTCT TTCCTTTTTGTTGCTCAGGAACCTGACAACATGATGGTTTACATGGAGGG TTCCTCGACTGGCGTCAGCGTGTCCGAAGCGGAACAGATCGAGTACAACT CCTGGTTCGCTGACATCGTTCACGCTAACGGCATGGGGGTCGGTAAGTCT TTTCTTGTAGGCCGTTGGATGTGCCAATGCTGTACGGGTGTCTTTCTTGG TTTCTTGTTTTTTAGTGCGCCGTCCTGGACTTCAGGGCCCAGGGCCTGCG CTTGCGTTCTGTACATGTCACATTAGCCCACATTCGTATACACTACGCGT CCATGCCCGCCGGGCCGAGTAGTGCACGTGTTAAACCGTTCGGGCCCGAA ACTGGGCGTTGCTTGTCATGTGGCTCATAAACACTGCCCTTGTCCCCTCT CTCTTGACCGTCACCAGGTCTTAAGAACGCGGTGGAGTTGGTCCCGATCC TCGTCAACAAGTTCGACTTCGCGCTGAACGAGGAGTGCCACGAGTGGAAC GAGTGTGTTGTTTACGAGGATACCTTCCTTGCGGAGGGCAAGCCCGTGTT CAACGTCGAGTATAACTTGGGCAATTCCGTGTGCGACGAGGCGAACGCCC TCGGCCTTGACACCATCCTGAAGGTGGGTAACATCGTCCGTTACGATCGT CTAATTCGATCTGTATGGTGCATGTTCTTGAAATCCAGACTAACGCCCTT TCATCGGTTTGGGAAGGCTTGTGGAACGGCGGTAGATGGGAGTGGTGAAG GAGCTGCACGCCTTCAAAGCAAGCACGTTGGCCGGTGTTTCTGCACGTAC CCGATACTAGCGGCATGACTCCTTCCCAATTTCTCCCCAAACCCTGTGCC TGACCCTGCTTGTCCGTGTGCGCTTCTCACAGAACTACGATTTGGACGCG GCTTTCTGCAGCTGCGTTGATCCGTCCAGGGACGTGGACTGCATGCACTA A
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9938:4041..6091-

>mRNA_Ecto-sp13_S_contig9938.21586.1 ID=mRNA_Ecto-sp13_S_contig9938.21586.1|Name=mRNA_Ecto-sp13_S_contig9938.21586.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9938:4041..6091- (Ectocarpus species13 EcNAP12_S_4_19m)
AATTTGGTGACACCAGTCGACACATCCGCGGACGTCGACGTCTTCTTCAT
CGACATGGACGCTGGCCAGGTCGTCATCGACGAGCTACACGACAAGGGCA
AGGGGGTGGTTTGCTACATCTCCATCGGCACGGTTGAGGACTGGCGTGAC
GACGCGAAGGAATTCCCGTCCTCGGCGATCGGCGGGGACGTCTCCGGGTG
GGCGGGCGAAAAGTGGGTCGACGTGAACGACCAGGATGTTCGTGAGATCA
TGACCGCCCGAGTGGAGATGGCGTCCAGCATGAACTGCGACGCTGTGGAA
CCTGACAACATGATGGTTTACATGGAGGGTTCCTCGACTGGCGTCAGCGT
GTCCGAAGCGGAACAGATCGAGTACAACTCCTGGTTCGCTGACATCGTTC
ACGCTAACGGCATGGGGGTCGGTCTTAAGAACGCGGTGGAGTTGGTCCCG
ATCCTCGTCAACAAGTTCGACTTCGCGCTGAACGAGGAGTGCCACGAGTG
GAACGAGTGTGTTGTTTACGAGGATACCTTCCTTGCGGAGGGCAAGCCCG
TGTTCAACGTCGAGTATAACTTGGGCAATTCCGTGTGCGACGAGGCGAAC
GCCCTCGGCCTTGACACCATCCTGAAGAACTACGATTTGGACGCGGCTTT
CTGCAGCTGCGTTGATCCGTCCAGGGACGTGGACTGCATGCACTAA
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