prot_Ecto-sp13_S_contig99249.21570.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig99249.21570.1
Unique Nameprot_Ecto-sp13_S_contig99249.21570.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A6H5JAH4_9PHAE (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.330e-14
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLLVSRPSTYV 44
            +PRDFYHTCYTLSGLSVAQHCLS SP V+GNSSNLL  RP+  V
Sbjct:  222 KPRDFYHTCYTLSGLSVAQHCLSSSPTVVGNSSNLL--RPTNPV 263          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: D7FXI8_ECTSI (Protein farnesyltransferase subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI8_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 6.350e-14
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLLVSRPSTYV 44
            +PRDFYHTCYTLSGLSVAQHCLS SP V+GNSSNLL  RP+  V
Sbjct:  467 KPRDFYHTCYTLSGLSVAQHCLSSSPTVVGNSSNLL--RPTNPV 508          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A7S3UTH9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTH9_HETAK)

HSP 1 Score: 60.1 bits (144), Expect = 1.890e-10
Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    3 RDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLLVSRPSTYVPR 46
            RDFYHTCY LSGLSVAQH L+E P V G+ SNLLV     ++ R
Sbjct:   48 RDFYHTCYNLSGLSVAQHVLAERPVVFGDPSNLLVRENMCFLRR 91          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A836CMB6_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.460e-10
Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLLVSRPSTY 43
            + RDFYHTCY LSGLSV QHCL+E+P+V+G+S+N L+     Y
Sbjct:  451 KTRDFYHTCYNLSGLSVTQHCLTETPSVLGDSANELLPTNPLY 493          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A7S3UVL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVL6_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 1.900e-9
Identity = 26/34 (76.47%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    3 RDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLL 36
            RDFYHTCY LSGLSVAQH L+E P V G+ SNLL
Sbjct:   48 RDFYHTCYNLSGLSVAQHVLAERPVVFGDPSNLL 81          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A7S2PM80_9STRA (Protein farnesyltransferase subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PM80_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.460e-7
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSES--PAVMGNSSNLL 36
            +PRDFYH+CY LSGLSVAQH LSE+  P V G++ NLL
Sbjct:  170 KPRDFYHSCYNLSGLSVAQHVLSENGVPLVYGDNRNLL 207          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A8K0DF95_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DF95_9COLE)

HSP 1 Score: 54.3 bits (129), Expect = 2.840e-7
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLL 36
            +PRD YHTCYTLSGLSVAQHC+  S  V+G + N L
Sbjct:  346 KPRDIYHTCYTLSGLSVAQHCVDGSLNVLGPADNKL 381          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A7S1KPD5_9EUKA (Protein farnesyltransferase subunit beta n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KPD5_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 5.330e-7
Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLL 36
            R  DFYHTCY LSGLS+AQH  S +P+++GN SN+L
Sbjct:  450 RGPDFYHTCYALSGLSIAQHNPSGTPSILGNPSNIL 485          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A7R8Z0M6_HERIL (Protein farnesyltransferase subunit beta n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8Z0M6_HERIL)

HSP 1 Score: 52.8 bits (125), Expect = 9.960e-7
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSE-SPAVMGNSSN-LLVSRPSTYVP 45
            +P+D YHTCYTLSG+SVAQHC S   P V+GN  N LL   P   VP
Sbjct:  345 KPQDLYHTCYTLSGVSVAQHCSSYLQPYVLGNPENELLPVHPLHNVP 391          
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Match: A0A2M3ZB72_9DIPT (Protein farnesyltransferase subunit beta (Fragment) n=1 Tax=Anopheles braziliensis TaxID=58242 RepID=A0A2M3ZB72_9DIPT)

HSP 1 Score: 52.4 bits (124), Expect = 1.360e-6
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 RPRDFYHTCYTLSGLSVAQHCLSES-PAVMGNS--SNLLVSRPSTYVP 45
            +P D YHTCYTLSGLSVAQHC S S P V+G+   + LL + P   +P
Sbjct:  258 KPADLYHTCYTLSGLSVAQHCESHSLPLVLGDEHMNELLPTHPVHNIP 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig99249.21570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAH4_9PHAE3.330e-1479.55Protein farnesyltransferase subunit beta n=1 Tax=E... [more]
D7FXI8_ECTSI6.350e-1479.55Protein farnesyltransferase subunit beta n=1 Tax=E... [more]
A0A7S3UTH9_HETAK1.890e-1063.64Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836CMB6_9STRA7.460e-1060.47Protein farnesyltransferase subunit beta n=1 Tax=T... [more]
A0A7S3UVL6_HETAK1.900e-976.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2PM80_9STRA1.460e-768.42Protein farnesyltransferase subunit beta n=1 Tax=L... [more]
A0A8K0DF95_9COLE2.840e-766.67Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A7S1KPD5_9EUKA5.330e-763.89Protein farnesyltransferase subunit beta n=1 Tax=P... [more]
A0A7R8Z0M6_HERIL9.960e-759.57Protein farnesyltransferase subunit beta n=1 Tax=H... [more]
A0A2M3ZB72_9DIPT1.360e-656.25Protein farnesyltransferase subunit beta (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 1..43
e-value: 2.7E-8
score: 35.0
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 2..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig99249contigEcto-sp13_S_contig99249:177..317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig99249.21570.1mRNA_Ecto-sp13_S_contig99249.21570.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig99249 177..317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig99249.21570.1 ID=prot_Ecto-sp13_S_contig99249.21570.1|Name=mRNA_Ecto-sp13_S_contig99249.21570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
RPRDFYHTCYTLSGLSVAQHCLSESPAVMGNSSNLLVSRPSTYVPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase