mRNA_Ecto-sp13_S_contig9923.21568.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9923.21568.1
Unique NamemRNA_Ecto-sp13_S_contig9923.21568.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A6H5JEJ5_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ5_9PHAE)

HSP 1 Score: 585 bits (1509), Expect = 4.580e-200
Identity = 424/471 (90.02%), Postives = 430/471 (91.30%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGGXXXXXXXXXXXXXXXXXXXXSGRNSGEISDDWRAGYDRSPTPPQIEARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDVKKQSSGPDLLSGDDPFPVTAPSQPQNDFSSFGSFAAAPQAFQGGAPVAPGAWNGGAGVPLQQXXXXXXXXXXXXXXXLAPGSQAGQMVPYGQGAPVPQNXXXXXXXXXXXVQGQTGWGQQTLQGQQGMQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQGVQQQQYVQLQQQMQ 1413
            MNI+KLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR  YGTVMR+VWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGY GDMPPRLSGG                    SGRNSGEI DDWRAGYDRSPTPPQI+ARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTD KKQSSGPDLLSGDDPFPV+AP QPQN+F SF SFAAAPQAFQGGAPVAPGAW+GGAGVPLQQXXXXXXXXXXXX   LAPG QAGQMVPYGQGAPVPQ XXXXXXXXX  VQGQTGWGQQTLQGQQGMQPXXXXXXXXXXXXXXXXXXXXXXXX     QQGVQQQQY QLQQQMQ
Sbjct:    1 MNIDKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR--YGTVMRVVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYGGDMPPRLSGGSGGGSRPPHDSSEGAGG---SGRNSGEIIDDWRAGYDRSPTPPQIDARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDGKKQSSGPDLLSGDDPFPVSAPPQPQNEFPSFDSFAAAPQAFQGGAPVAPGAWDGGAGVPLQQXXXXXXXXXXXXQ--LAPGLQAGQMVPYGQGAPVPQXXXXXXXXXXMQVQGQTGWGQQTLQGQQGMQPXXXXXXXXXXXXXXXXXXXXXXXX-----QQGVQQQQYGQLQQQMQ 459          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: D7FUU7_ECTSI (ENTH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU7_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 1.900e-151
Identity = 276/312 (88.46%), Postives = 279/312 (89.42%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGGXXXXXXXXXXXXXXXXXXXXSGRNSGEISDDWRAGYDRSPTPPQIEARRTVGGRSESIDFDEGREGYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDVKKQSSGPDLLSGDDPFP 936
            MNINKLR KAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR  YGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREK+REL+SLMDNPDLIQAQRRNARDLKSQYNGY GDMPPRLSGG  XXXXXXXXXXXXXXX   SGRNSGEISDDWRAGYDRSPTPPQI+ARR VGGRSESIDFDEGREGYS                      XXXXXXXXXXXXXXXXXXXXXXXASASKKRTD KKQSSGPDLLSGDDPFP
Sbjct:    1 MNINKLRNKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDR--YGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKARELVSLMDNPDLIQAQRRNARDLKSQYNGYGGDMPPRLSGGSGXXXXXXXXXXXXXXX---SGRNSGEISDDWRAGYDRSPTPPQIDARRAVGGRSESIDFDEGREGYSGRLSRFQEQEKREAKLVSGGRRXXXXXXXXXXXXXXXXXXXXXXXASASKKRTDGKKQSSGPDLLSGDDPFP 307          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A835YGI8_9STRA (ENTH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGI8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.700e-32
Identity = 62/153 (40.52%), Postives = 104/153 (67.97%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTV-KDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNAR 456
            + I+KL+  A  +  Q+ V K++ E++V D +SN  + A  ++LN++A D++  D+  YG +M +VW++++SPPR WR + KAL L++HL+K+G ERVV D +  +H I  L++F Y E   D G GVREKS++L+ L+ + D I+ +R+ A+
Sbjct:    8 LTIDKLKNLAADVKNQVAVAKNDTERQVYDVLSNKNWGASSTILNDIARDSYDFDK--YGMIMTIVWQSLESPPREWRKVFKALSLLEHLIKNGTERVVEDARDRMHRITTLSQFNYYEGHADKGSGVREKSKQLIELLKSNDTIREERKRAQ 158          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A7S4DHG0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHG0_HETAK)

HSP 1 Score: 126 bits (316), Expect = 4.060e-30
Identity = 60/172 (34.88%), Postives = 109/172 (63.37%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGG 516
            + ++ ++  A+ +   +  K++ EKRV +A+SN  + A  +L+ E+A+DTF +++  Y  + +L+W+ +DSP R WRS+ K L L++ LVKHG+ERV+ D + H H +  L  F Y +   D G GVR+K+R+L+ L+ + + I+ +R+ A+ L+++++G   D      GG
Sbjct:   12 LTLDDVKNIAQDVAINVKPKNDTEKRVHEALSNQNWGASSTLMQEIAKDTFDYEK--YPQITKLIWQALDSPGRAWRSVFKGLSLLEFLVKHGSERVIEDARDHTHRLRLLLNFSYSDGGVDRGQGVRDKARQLVELLSSNETIREERQKAQALRNKFSGISNDSYSYGGGG 181          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A4D9CR71_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR71_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.760e-29
Identity = 65/171 (38.01%), Postives = 106/171 (61.99%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSG 513
            +N+  L+   +    Q+  + E EKR+ +A+SN  + A  +L+N++A DT+ +++  Y  V++ +W  +D P R+WRSI KAL L+DHLVK+GAERVV +V+ H+H+I  L +F Y E   D G G+REK++ L+ L+     ++ +R  AR L+ ++ G      PR  G
Sbjct:  172 INLESLKNMVDEAKNQIVPRTEMEKRMHEALSNKNWGASSTLMNQIASDTYDYEK--YHQVLKAIWSALDLPGRSWRSIFKALTLLDHLVKNGAERVVEEVRDHLHKIRTLADFNYFEGSLDRGSGIREKAKMLMELVGENGRVREEREKARRLREKFVGIGVTGGPRNGG 340          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 4.470e-29
Identity = 59/160 (36.88%), Postives = 105/160 (65.62%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNG 480
            ++++K++     +   +  +++ EKRV +A+SN  + A  +LLN++A DT+  ++  YG V+ L+W  + SP R WR + KAL L++HL+K+GAERV+ D + ++H +  L++F Y E   D G GVREKS++++ L+ + D+I+ +R   R L+ +Y G
Sbjct:   12 LSLDKVKNMVGEVRDTIAPRNDTEKRVYEALSNKNWGASSTLLNDIARDTYDFEK--YGIVLPLIWTALQSPSREWRKVFKALCLLEHLIKNGAERVIEDARDNLHRVRMLSDFNYYEGPIDKGSGVREKSKQVIELLKDNDMIREEREKCRKLRDKYVG 169          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A7S2LFQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LFQ5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.570e-27
Identity = 59/172 (34.30%), Postives = 106/172 (61.63%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGG 516
            ++++K+R  AE ++ Q   + + EK+VL+ +S+  + A  + LNE+A +T  HD   Y  + +L+W+ +D  P  WR + KAL L++HL+K+G +R+V D + H H++  L  F Y E   D G GVREKS++++ ++ + D ++ +R+ AR L+ ++ G  G      +GG
Sbjct:   11 LSLDKIRNAAEDVINQTIPRTDLEKKVLEVLSHKNWGASSTTLNELARET--HDYEKYNVITKLMWEAMDGRPAAWRVVFKALTLLEHLLKNGTDRIVEDARGHGHKLRSLYNFNYYEGTTDRGIGVREKSKQIMEILQDNDRVREERQKARQLREKFGGGLGMAAVGSNGG 180          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A7S2LE80_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LE80_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.540e-26
Identity = 59/172 (34.30%), Postives = 106/172 (61.63%), Query Frame = 1
Query:    1 MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNGYEGDMPPRLSGG 516
            ++++K+R  AE ++ Q   + + EK+VL+ +S+  + A  + LNE+A +T  HD   Y  + +L+W+ +D  P  WR + KAL L++HL+K+G +R+V D + H H++  L  F Y E   D G GVREKS++++ ++ + D ++ +R+ AR L+ ++ G  G      +GG
Sbjct:   11 LSLDKIRNAAEDVINQTIPRTDLEKKVLEVLSHKNWGASSTTLNELARET--HDYEKYNVITKLMWEAMDGRPAAWRVVFKALTLLEHLLKNGTDRIVEDARGHGHKLRSLYNFNYYEGTTDRGIGVREKSKQIMEILQDNDRVREERQKARQLREKFGGGLGMAAVGSNGG 180          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A8K1FFS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFS9_PYTOL)

HSP 1 Score: 118 bits (296), Expect = 9.460e-25
Identity = 53/139 (38.13%), Postives = 95/139 (68.35%), Query Frame = 1
Query:   64 ECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNG 480
            + EK++ +A+SN  + A  +LLNE+A+ T+ ++   Y  +M  +W+ +DS  R WR++ KAL L+DHL+K+G ERVV + + H+ ++  L++F Y +   D G GVREK++++L +++N DLI+ +R  +R ++ +Y G
Sbjct:   27 DVEKKLEEALSNKNWGASSTLLNEIAQLTYDYES--YNVIMTKIWEAMDSHARQWRTVFKALTLLDHLIKNGTERVVENARDHMFKLRALSDFSYHDGSADKGAGVREKTKQILDMLNNNDLIREEREKSRKMRDKYVG 163          
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Match: A0A024TDZ4_9STRA (ENTH domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TDZ4_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.730e-24
Identity = 59/151 (39.07%), Postives = 99/151 (65.56%), Query Frame = 1
Query:   28 AEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDTFAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVADVQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRNARDLKSQYNG 480
            A+GLV      D  EK++ +A+SN  + A  +LLNE+A+ TF ++   Y  VM+ VW+ +D+  R WR++ KAL L+DHL+K+G ERVV + + H+ ++  L++F Y +   D G GVREK +++L ++++ D I+ +R  A+ L+ +Y G
Sbjct:   16 AKGLVKSKMGTDT-EKKLEEALSNKNWGASSTLLNEIAQLTFEYES--YNLVMKKVWEAMDAEGRQWRTVFKALALLDHLIKNGTERVVENARDHMFKLRTLSDFNYYDGSADKGAGVREKVKQILDMLNDNDRIRDEREKAKRLRDKYIG 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9923.21568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEJ5_9PHAE4.580e-20090.02ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FUU7_ECTSI1.900e-15188.46ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YGI8_9STRA1.700e-3240.52ENTH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S4DHG0_HETAK4.060e-3034.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CR71_9STRA2.760e-2938.01Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6H5JZR7_9PHAE4.470e-2936.88ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2LFQ5_9STRA1.570e-2734.30Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2LE80_9STRA1.540e-2634.30Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8K1FFS9_PYTOL9.460e-2538.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TDZ4_9STRA2.730e-2439.07ENTH domain-containing protein n=2 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9923contigEcto-sp13_S_contig9923:330..3943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score447.2
Seed ortholog evalue9.7e-123
Seed eggNOG ortholog2880.D7FUU7
Preferred nameENT3
Model size1452
KEGG koko:K12471
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000147,GO:0002020,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005856,GO:0005884,GO:0005886,GO:0005938,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006895,GO:0006897,GO:0006996,GO:0007010,GO:0007015,GO:0007034,GO:0008104,GO:0008150,GO:0008289,GO:0009579,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016482,GO:0019899,GO:0022607,GO:0030029,GO:0030036,GO:0030117,GO:0030118,GO:0030120,GO:0030125,GO:0030135,GO:0030136,GO:0030276,GO:0030479,GO:0030659,GO:0030662,GO:0030665,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031410,GO:0031982,GO:0032266,GO:0032509,GO:0032511,GO:0032991,GO:0033036,GO:0033365,GO:0034498,GO:0034613,GO:0035091,GO:0042147,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045184,GO:0045324,GO:0046907,GO:0048193,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061645,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080025,GO:0097435,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:1901981,GO:1902936
Exons5
EggNOG free text desc.lipid binding
EggNOG OGsKOG2056@1,KOG2056@2759
Cds size1452
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464253.017399-CDS-Ecto-sp13_S_contig9923:329..9961681464253.017399-CDS-Ecto-sp13_S_contig9923:329..996Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9923 330..996 -
1681464253.0320055-CDS-Ecto-sp13_S_contig9923:1548..19541681464253.0320055-CDS-Ecto-sp13_S_contig9923:1548..1954Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9923 1549..1954 -
1681464253.0431583-CDS-Ecto-sp13_S_contig9923:2361..25701681464253.0431583-CDS-Ecto-sp13_S_contig9923:2361..2570Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9923 2362..2570 -
1681464253.0539296-CDS-Ecto-sp13_S_contig9923:3625..36901681464253.0539296-CDS-Ecto-sp13_S_contig9923:3625..3690Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9923 3626..3690 -
1681464253.0662773-CDS-Ecto-sp13_S_contig9923:3838..39431681464253.0662773-CDS-Ecto-sp13_S_contig9923:3838..3943Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9923 3839..3943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9923.21568.1prot_Ecto-sp13_S_contig9923.21568.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9923 330..3943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9923.21568.1

>prot_Ecto-sp13_S_contig9923.21568.1 ID=prot_Ecto-sp13_S_contig9923.21568.1|Name=mRNA_Ecto-sp13_S_contig9923.21568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=484bp
MNINKLRTKAEGLVTQLTVKDECEKRVLDAVSNNKYAAPRSLLNEVAEDT
FAHDRWVYGTVMRLVWKTIDSPPRNWRSISKALVLVDHLVKHGAERVVAD
VQQHVHEIACLNEFRYVENMYDTGGGVREKSRELLSLMDNPDLIQAQRRN
ARDLKSQYNGYEGDMPPRLSGGSGGGSRPPHDSSGGGGGGGGSGRNSGEI
SDDWRAGYDRSPTPPQIEARRTVGGRSESIDFDEGREGYSGRLSRFQEQE
KREARLASGGRRGSRDSAEGASSTAPRAGSAGGKGASASKKRTDVKKQSS
GPDLLSGDDPFPVTAPSQPQNDFSSFGSFAAAPQAFQGGAPVAPGAWNGG
AGVPLQQQQYQQQQQQQQQQQQLAPGSQAGQMVPYGQGAPVPQNQQQQPI
QPGMQVQGQTGWGQQTLQGQQGMQPQGIQPQGMQQPGMQQQGGYSQGPGA
QFPGQQGVQQQQYVQLQQQMQPPPPQQHMYQQYQ
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mRNA from alignment at Ecto-sp13_S_contig9923:330..3943-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9923.21568.1 ID=mRNA_Ecto-sp13_S_contig9923.21568.1|Name=mRNA_Ecto-sp13_S_contig9923.21568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3614bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9923:330..3943- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACATCAATAAGCTCCGGACTAAGGCTGAGGGTCTGGTGACCCAGCT CACGGTGAAGGATGAGTGTGAGAAGAGGGTGCTGGATGCTGTCTCCAACA ACAAGGTAACTTGAGGCCGCAAGAGCTACATAGCTCCTGACCTCCTAAAA ATGTAGCTGTGATCCCCGCTACCGATGCTCCCTAGCGCCGCATGCTGGCA TGGATGTGCTCACGTTCTGCTACACCGCTGCTGCTTCCTATCCTCTAAAA CAGTACGCTGCTCCACGCTCCTTGCTGAACGAGGTGGCCGAGGATACTTT CGCTCACGACAGATGGGTGTGAACAGCGAATCAAATAAAAGTGCATGTGG ATGGTGTTGTTTCGGAATGCACCAGAGTCACGGCGCGTGCCTTGTGCGGC GGCGAAATTGCGGGATGAACGATGGAAGACGATGCGTTCTTTGTCTTTTG GCCGATACGACAGCCGCCCTCTGTGCATGGCACTATCAACGTACAGCAGT CTGGCAGAGATGTATGGGCAGTCGGGGTTCGCCTCAGCAGCGAGGCCTTT CTCCTTCTTCCCTGTTATGCACAGCCCAATGGCCAGACTTGTGGTGCTCA GGCGCGCAGACCCATGACTGCTGCTATTTTTTCTTCCGAAGAAGAAACCA GAACCCGATCACCTTCGTAATTGCGGTTCCATCACACTGTAAGCATAATT GTAAAGAACTCCTCCTTTTTTACGTTTTTGCGTCTCTGGATGTGCGAGCT ATGCTACCAACACGGTGCTCTTCCACGGCCGGAGATGTGCTGGGATCCCC GGTGGTACCTTGTGTGTGTTCCGCATGCATACGACCTGAACTGCATGCCG GATCTTTGGATCCTCGGGGGAGAGGGGGGGGGACGCAGAGCGTAAGACTC AATCCACACGTTTAGTCCGCACGTCCGCACTCTTGCAACACACACAGCGA CGCATTGACCAAGCGCCACACTTTGTACAGAGTAGAAAACGGTTTGCATG CGGCATAGCTGGAAACTTGATTGCGTTGTCGTATCGATTGCCCGGGTTCC CAGTCCACCGGTGAAAGGTTTTTGTTCTTCCCAAGATATGACTCAGTCGA TCCCTTGGATGCGGCTGCAGTGTGTGTGCGTTTGGGAGCACGCCTCTTGA GAAAGCCAACCGGTGTGTAGAAGAGTATGCATCGGGGAAAGGCGCCGACC GCTCTGCCATCGCACCTCTGCGGTGTCCATGATGGAGCGGGTCCATATCC CCGAGAAAGCAACCGGAGTGAATGGGTGCGACGTGCCCAATGTTATGTGC ACACGAGCGGTACCTGGGCGCTCACAAACGCCGTAACGCCCCCTGTTCGT TTTGTCACTACTCGGTCGAGCAGATACGGCACGGTAATGCGGTTGGTGTG GAAAACTATCGACTCGCCACCGCGGAACTGGCGGTCCATCTCGAAGGCGC TGGTTCTGGTGGATCACCTCGTCAAGCACGGCGCAGAGAGGGTGGTGGCC GACGTTCAACAGCACGTTCACGAGATCGCTTGCCTCAACGAGTTCAGATA CGTTGAGAATATGTACGACACGGGCGGCGGTGGTAAGTACCATCGCTAGT GGTGTTGGTGGCGTCAAAAGTGTGTTGCCGTACACAGTGCATATGGGCTA CGTGTGCGTTCTGTTCGGACGGCTGTTGAAAATTGTTTTGGCGTTAGTTC TGCCATTGCTGCTGGCGTTCTTGCTGAGGTTGTTGCTCCTGTATGCTCTA CGGGCATCGTGCGTCTTGTGTATCTTACAACGTTCCTTTGTTGCGAAACA GCACAGCGGTTCGCCGCCGCTTCCTGCCCGTGAACACGTCCTTCATCAAC CGCAACGACTTCTTAGAACCTCCGAAGGGTCCCGTTTGTTTCCAACGATA TCGTCCCGCCTCTCTTCGCCTGCCGCCGCGCTGCCCAACACTTGACTCGG TTGTGTTGTTCGCCAACGGCGCAATTCCACAACAATCAGTTCGCGAGAAG TCCCGGGAGCTGCTGAGTCTGATGGACAATCCCGATCTAATCCAGGCCCA GCGTCGCAATGCCAGAGACTTGAAATCCCAGTACAACGGCTACGAGGGCG ACATGCCACCAAGGCTATCCGGCGGCAGCGGAGGCGGTTCACGTCCCCCC CACGACTCATCCGGAGGCGGCGGCGGCGGCGGCGGCAGCGGCAGGAACAG CGGCGAAATTAGTGACGATTGGAGGGCCGGGTACGACCGCAGTCCGACGC CTCCACAGATTGAAGCTAGGAGGACTGTTGGCGGCAGGTCGGAGTCGATC GACTTCGACGAGGGTAGGGAAGGGTACAGCGGGAGGCTTAGCCGGTTCCA GGAACAGGAGAAGAGAGAGGCCAGACTGGCGTCGGGGGGGCGCAGGTTTG TTTGTGTGTTGGGATGTTTGAGTTTGGTGCTGAGTTTTGTTGGGTAGCGT CGTGCGTGGTGTTGCTTCCTGGTATGTTCGGAGTCGGTGTCATTTTTCTT GCCGTAGTGGTTATATTATATGTGTAGTTGTTGTTGAACCGCAAGTATGA TGCCAAGGGGTACTGGCCTGCGTGATCGTTGGTTCCTCATCGTCGCTTGT TCCCGAATAGTGGTTGCGCCTGCTGGGTGGGAGTGCTGGCTCCGTACATC GTGGTGCAACTCGTACAACAAACGAGTCATCCATAGATAGCAGTATCGGT GAGCGCACGACGAGTAGGCCCAACCCTCTGGAACAAAGTATGGACAAAAC GCGTTTCATTTTTTTTCGATAGGCGTACACCCCGCGAACCTGCACCACCC TCCGTCTACTGGCGGAAAGTTACGGGGGGCGTTAAGATCTACTCTAGAAT CGTGCAGCGTCCCCCTCTGGCCTTCTATCCTCCATGCATGACAGGTACAA GCCATCCACCTCTTGCCTCACCAATCGAACGCCCTCCCCGTCCTCAGGGG CAGCCGGGACAGCGCCGAAGGCGCTAGCTCAACCGCACCAAGAGCAGGCA GTGCTGGCGGCAAGGGTGCCTCAGCGTCCAAGAAACGCACAGACGTCAAG AAGCAGTCGTCGGGGCCGGATCTACTGTCCGGGGATGATCCGTTCCCGGT AACGGCGCCTTCGCAGCCGCAGAACGATTTCTCGTCGTTCGGTTCCTTTG CTGCGGCGCCCCAGGCCTTCCAGGGCGGCGCGCCTGTGGCGCCGGGTGCT TGGAATGGGGGAGCGGGCGTGCCGCTGCAACAGCAACAGTACCAACAGCA ACAGCAGCAGCAGCAGCAGCAGCAGCAGCTGGCTCCAGGTTCACAGGCGG GGCAAATGGTTCCGTATGGGCAAGGGGCTCCTGTGCCACAAAACCAACAA CAGCAGCCAATTCAGCCCGGGATGCAGGTGCAGGGCCAGACCGGCTGGGG TCAGCAGACATTGCAAGGGCAACAGGGGATGCAGCCGCAGGGGATACAGC CGCAGGGGATGCAGCAGCCGGGGATGCAACAGCAGGGCGGGTACAGCCAA GGACCGGGTGCGCAGTTCCCTGGGCAGCAGGGAGTGCAACAGCAGCAGTA TGTTCAGTTGCAACAGCAGATGCAGCCCCCGCCACCACAACAGCACATGT ATCAGCAGTACCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9923:330..3943-

>mRNA_Ecto-sp13_S_contig9923.21568.1 ID=mRNA_Ecto-sp13_S_contig9923.21568.1|Name=mRNA_Ecto-sp13_S_contig9923.21568.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1452bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9923:330..3943- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACATCAATAAGCTCCGGACTAAGGCTGAGGGTCTGGTGACCCAGCT
CACGGTGAAGGATGAGTGTGAGAAGAGGGTGCTGGATGCTGTCTCCAACA
ACAAGTACGCTGCTCCACGCTCCTTGCTGAACGAGGTGGCCGAGGATACT
TTCGCTCACGACAGATGGGTATACGGCACGGTAATGCGGTTGGTGTGGAA
AACTATCGACTCGCCACCGCGGAACTGGCGGTCCATCTCGAAGGCGCTGG
TTCTGGTGGATCACCTCGTCAAGCACGGCGCAGAGAGGGTGGTGGCCGAC
GTTCAACAGCACGTTCACGAGATCGCTTGCCTCAACGAGTTCAGATACGT
TGAGAATATGTACGACACGGGCGGCGGTGTTCGCGAGAAGTCCCGGGAGC
TGCTGAGTCTGATGGACAATCCCGATCTAATCCAGGCCCAGCGTCGCAAT
GCCAGAGACTTGAAATCCCAGTACAACGGCTACGAGGGCGACATGCCACC
AAGGCTATCCGGCGGCAGCGGAGGCGGTTCACGTCCCCCCCACGACTCAT
CCGGAGGCGGCGGCGGCGGCGGCGGCAGCGGCAGGAACAGCGGCGAAATT
AGTGACGATTGGAGGGCCGGGTACGACCGCAGTCCGACGCCTCCACAGAT
TGAAGCTAGGAGGACTGTTGGCGGCAGGTCGGAGTCGATCGACTTCGACG
AGGGTAGGGAAGGGTACAGCGGGAGGCTTAGCCGGTTCCAGGAACAGGAG
AAGAGAGAGGCCAGACTGGCGTCGGGGGGGCGCAGGGGCAGCCGGGACAG
CGCCGAAGGCGCTAGCTCAACCGCACCAAGAGCAGGCAGTGCTGGCGGCA
AGGGTGCCTCAGCGTCCAAGAAACGCACAGACGTCAAGAAGCAGTCGTCG
GGGCCGGATCTACTGTCCGGGGATGATCCGTTCCCGGTAACGGCGCCTTC
GCAGCCGCAGAACGATTTCTCGTCGTTCGGTTCCTTTGCTGCGGCGCCCC
AGGCCTTCCAGGGCGGCGCGCCTGTGGCGCCGGGTGCTTGGAATGGGGGA
GCGGGCGTGCCGCTGCAACAGCAACAGTACCAACAGCAACAGCAGCAGCA
GCAGCAGCAGCAGCAGCTGGCTCCAGGTTCACAGGCGGGGCAAATGGTTC
CGTATGGGCAAGGGGCTCCTGTGCCACAAAACCAACAACAGCAGCCAATT
CAGCCCGGGATGCAGGTGCAGGGCCAGACCGGCTGGGGTCAGCAGACATT
GCAAGGGCAACAGGGGATGCAGCCGCAGGGGATACAGCCGCAGGGGATGC
AGCAGCCGGGGATGCAACAGCAGGGCGGGTACAGCCAAGGACCGGGTGCG
CAGTTCCCTGGGCAGCAGGGAGTGCAACAGCAGCAGTATGTTCAGTTGCA
ACAGCAGATGCAGCCCCCGCCACCACAACAGCACATGTATCAGCAGTACC
AG
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