prot_Ecto-sp13_S_contig9919.21564.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9919.21564.1
Unique Nameprot_Ecto-sp13_S_contig9919.21564.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length127
Homology
BLAST of mRNA_Ecto-sp13_S_contig9919.21564.1 vs. uniprot
Match: D8LHL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL8_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 5.840e-20
Identity = 56/81 (69.14%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    2 VQQDENLLIYHSTKQMRIAGSRFKEGMEASQDTSSLSMALWVLNAKASPGTVEFGWLGVLNGRKVATVFEDPSIQASNTEI 82
            VQQ ENLLIY STK++RIAGS F+E ME   D S L MAL V + KASPGTV+FG LG+L   KVATVFED SIQA NTEI
Sbjct:  392 VQQYENLLIYQSTKEVRIAGSGFEENME---DPSLLPMALLVSSVKASPGTVDFGLLGLLPIGKVATVFEDASIQARNTEI 469          
BLAST of mRNA_Ecto-sp13_S_contig9919.21564.1 vs. uniprot
Match: A0A6H5JNN1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN1_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.040e-16
Identity = 60/128 (46.88%), Postives = 65/128 (50.78%), Query Frame = 0
Query:    2 VQQDENLLIYHSTKQMRIAGS------------RFKEGMEAS-----------------------------------QDTSSLSMALWVLNAKASPGTVEFGWLGVLNGRKVATVFEDPSIQASNTEI 82
            +QQDENLLIY STKQ+RIAGS              +  M  S                                   Q  S L MAL V + KASPGTV+FGWLGVLNGRKVA VFEDPSIQA NTEI
Sbjct:  192 LQQDENLLIYQSTKQIRIAGSGAARLLPNGRYTTLQFFMSPSSIPPTVFGLTIDQCVTPHQLVKVSLNLPQPLSVLPQGPSFLPMALLVSSVKASPGTVDFGWLGVLNGRKVAIVFEDPSIQARNTEI 319          
BLAST of mRNA_Ecto-sp13_S_contig9919.21564.1 vs. uniprot
Match: A0A6H5JWP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP2_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-8
Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    2 VQQDENLLIYHSTKQMRIAGSRFKEGMEASQDTSSLSMALWVLNAKASPGTVEFGWLGVLNGRKVATVFEDPSIQASNTEI 82
            V+QDE+LL+Y STKQ+RI GS F++  E S+                    +  G    L+GRKVATVFEDP++QAS+TEI
Sbjct:   40 VEQDEDLLVYQSTKQIRIGGSGFEDVTEPSRRR-----------------RLGQGGFSTLHGRKVATVFEDPTVQASDTEI 103          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9919.21564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHL8_ECTSI5.840e-2069.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNN1_9PHAE1.040e-1646.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JWP2_9PHAE1.160e-845.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9919contigEcto-sp13_S_contig9919:3040..5394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9919.21564.1mRNA_Ecto-sp13_S_contig9919.21564.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9919 189..5468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9919.21564.1 ID=prot_Ecto-sp13_S_contig9919.21564.1|Name=mRNA_Ecto-sp13_S_contig9919.21564.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=127bp
MVQQDENLLIYHSTKQMRIAGSRFKEGMEASQDTSSLSMALWVLNAKASP
GTVEFGWLGVLNGRKVATVFEDPSIQASNTEIDTAPHASETSTAPVSTMW
LNRSWYSNRPSTTRTSTSTESTLAPA*
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