prot_Ecto-sp13_S_contig9913.21559.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9913.21559.1
Unique Nameprot_Ecto-sp13_S_contig9913.21559.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9913.21559.1 vs. uniprot
Match: A0A6H5JCM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM7_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 5.640e-41
Identity = 82/94 (87.23%), Postives = 85/94 (90.43%), Query Frame = 0 
Query:   15 MARLACCYALVGVFSNIAARAGLAAGFSCGSVQHVKGLQRALVRALPGAAXXXXXQIPARWPPAANPPPRSVRPSVSPLGGSSASDLISRDGHG 108
            MARL+CCYALVGVFSNIAARAGL +GFSCGSV HVKGLQRALVRALPGAA     +IPARWPPAANP PR VRPSVSPLGGSSASDLISRDGHG
Sbjct:    1 MARLSCCYALVGVFSNIAARAGLVSGFSCGSVHHVKGLQRALVRALPGAAAAA--RIPARWPPAANPLPRHVRPSVSPLGGSSASDLISRDGHG 92
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9913.21559.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCM7_9PHAE5.640e-4187.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9913contigEcto-sp13_S_contig9913:1495..4201 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9913.21559.1mRNA_Ecto-sp13_S_contig9913.21559.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9913 1495..4201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9913.21559.1 ID=prot_Ecto-sp13_S_contig9913.21559.1|Name=mRNA_Ecto-sp13_S_contig9913.21559.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
CVRVLHSNSLSTDTMARLACCYALVGVFSNIAARAGLAAGFSCGSVQHVK
GLQRALVRALPGAAAAAAAQIPARWPPAANPPPRSVRPSVSPLGGSSASD
LISRDGHG
back to top