prot_Ecto-sp13_S_contig12605.2155.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12605.2155.1
Unique Nameprot_Ecto-sp13_S_contig12605.2155.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length266
Homology
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: A0A6H5KQ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ72_9PHAE)

HSP 1 Score: 502 bits (1293), Expect = 1.620e-178
Identity = 252/264 (95.45%), Postives = 253/264 (95.83%), Query Frame = 0
Query:    1 MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHKALTGTTVANGR 264
            MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAA  A  G      DEGCALAGSLSKGLCYVN+KMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHKAL GTTVANGR
Sbjct:   57 MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAADAAGGG------DEGCALAGSLSKGLCYVNKKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHKALAGTTVANGR 314          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: D7FYW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW3_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.050e-94
Identity = 151/176 (85.80%), Postives = 157/176 (89.20%), Query Frame = 0
Query:    1 MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGL 176
            MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQR+LGRGSVSTKEFQ+CLWDGLGRVVERGHAA +A  G      DEGCALAGSLSKGLCY+NRKMRESSSIQA   RALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTG    +  G G+
Sbjct:   57 MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRTLGRGSVSTKEFQDCLWDGLGRVVERGHAADEAGGG------DEGCALAGSLSKGLCYINRKMRESSSIQA---RALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGKGARKTTGTGM 223          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: A0A835ZC01_9STRA (Putative general transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC01_9STRA)

HSP 1 Score: 254 bits (650), Expect = 3.170e-81
Identity = 128/248 (51.61%), Postives = 173/248 (69.76%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKA--RPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKI 247
            F++SYL+MHRRN++  VAC    S ++FPTPA+E++  SL  G VS+K  Q+C+ DGL R +    A G A  +P + S        +A +LS+ LC+ +RK+ E+ S+Q    R LV+   PD PE+YN+VMN IFSAQKA + VDC  +G  S F+QQAA +TGG+Y   Q   + Q +    LPSQ+CRKYL+ + Q++VDFRAACFCH+R+++IAYVCSVCLSVFCEFSP+C TCGTRA PK +
Sbjct:   45 FLQSYLLMHRRNDIAVVACGEAGSRMVFPTPAIEKDNVSLATGGVSSKRVQSCIVDGL-RELMSASACGTASVQPAVSSK-----APIAKALSQALCFTHRKITENPSVQT---RLLVVQAGPDAPESYNAVMNCIFSAQKAQIPVDCLCVGPDSVFMQQAADVTGGVYCHVQEPNVLQQLLTLILPSQACRKYLRTKGQETVDFRAACFCHRRLIEIAYVCSVCLSVFCEFSPICATCGTRAVPKLL 283          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: D7FYW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW4_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 6.010e-67
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
Query:  163 LTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHKALTGTTVANGRS 265
            L GGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRG+HKAL GTTVANGRS
Sbjct:   15 LPGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGRHKALAGTTVANGRS 117          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: K3WG36_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG36_GLOUD)

HSP 1 Score: 195 bits (495), Expect = 1.680e-57
Identity = 113/258 (43.80%), Postives = 159/258 (61.63%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTGGLYLE-HQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRA--WPKKIKRGKHKAL 255
            FV SYL++HR N +  +A  A ++ +++P P          +G  S    Q+   +   +V+++  A  +  P  P+  +    A+A S+S+ LC++NR + E S ++    R LV+  SPDV E Y S+MN IFSAQK GV VD  VL  + S+FLQQAAYLTGG+Y + +   GL QY+ + +LP  S RK LKL +Q SVDFRA CFCHKRV+  A+VC VCLS+FCEF P+C+TCG R+   P K  + + K L
Sbjct:   69 FVNSYLLLHRSNRIVIIAAHAGKAEMLYPDP---------NQGDTSGSAEQSAKVNA--KVMQKLQALSEL-PVDPA--KPNATAIAASISRALCFINRAINEQSDLRP---RILVIQKSPDVSEHYISIMNGIFSAQKKGVAVDACVLARDQSSFLQQAAYLTGGIYYKPNDHSGLLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKRVISTAFVCPVCLSLFCEFQPICSTCGIRSRIQPAKKMQQQKKRL 309          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: A0A5D6XQC8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQC8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 8.220e-57
Identity = 111/256 (43.36%), Postives = 154/256 (60.16%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTGGLY---LEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHK 253
            FV +YL++HR N +  VA  A  + +++P      +Q + G    S K   +        V+++  A G A        +    A+A SLS+ LC++NR +RE S ++    R LV+  SPDV + Y S+MN IFSAQK  V VD C +  E S+FLQQAAYLTGG+Y   ++H G  L QY+ + +LP  S RK LKL +Q SVDFRA CFCHK V+  A+VC VCLS+FCEF P+C+TCG R+  +  K+ + K
Sbjct:   65 FVNAYLLLHRSNRIVVVAAHAGRAEMLYPDA---EQQDTSGSAEQSAKVNTS--------VLQKLRALGNAPI---DASKPNATAIAASLSRALCFINRAIREQSDLRP---RVLVIQKSPDVAQHYISIMNGIFSAQKKSVAVDACVLASEHSSFLQQAAYLTGGIYYKPIDHSG--LLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKEVISTAFVCPVCLSLFCEFQPICSTCGIRSRIQPAKKLQQK 301          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: A0A8K1C5A8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5A8_PYTOL)

HSP 1 Score: 193 bits (491), Expect = 1.800e-56
Identity = 113/243 (46.50%), Postives = 151/243 (62.14%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTGGLYLE-HQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRA 242
            FV SYL++HR N +  +A  A  S +++P PA   +  + G    S K           RV+E+  A  +  P  PS  +    A+A S+S+ LC++NR + E++ +  SP R LV+  SPDV E Y S+MN IFSAQK  V VD  +L  E S F+QQAAYLTGG+Y + +   GL +Y+ + +LP  S RK LKL TQ SVDFRA CFCH+ VV  AYVC VCLS+FCEF P+C+TCG R+
Sbjct:  106 FVNSYLLLHRNNRIVIIAAHAGRSEMLYPDPA---QNDTSGTAEQSLKVTN--------RVMEKLKALSEI-PMDPS--KPNATAIAASISRSLCFINRAITENADL--SP-RILVIQKSPDVSEHYISIMNGIFSAQKKNVAVDACILSREHSPFMQQAAYLTGGIYYKPNDHSGLLEYLLSIYLPDPSLRKLLKLPTQDSVDFRAMCFCHQEVVSTAYVCPVCLSLFCEFKPICSTCGIRS 331          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: H3GBC5_PHYRM (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3GBC5_PHYRM)

HSP 1 Score: 191 bits (485), Expect = 3.580e-56
Identity = 111/254 (43.70%), Postives = 152/254 (59.84%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTGGLYLEHQGV-GLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHK 253
            FV SYL++HR N +  +A  A +S +++P P  E+E  S G    + K     +     R+ +   A     P  P+       A+A S+S+ LC++NR + E   ++    R LV+  SPDV E Y ++MN IFSAQK  V VD C +  E S+F+QQAAYLTGG+Y +  G  GL QY+ + +LP  S RK LKL +Q SVDFRA CFCH+ V+  AYVC VCLS+FCEF P+C+TCG R+  +  K G  K
Sbjct:   56 FVNSYLLLHRSNRIVIIAAHAGKSAMLYPDP--EQEDTS-GNAEQAAKVNAGVMQ----RLQQLSDAP--LDPAKPNR-----TAIAASISRALCFINRAINEEPDLRP---RILVVQKSPDVSEHYIAIMNGIFSAQKKSVAVDACILAAEHSSFMQQAAYLTGGIYYKPNGPSGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRSHIQPKKNGVLK 292          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: A0A3M6VU71_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU71_9STRA)

HSP 1 Score: 191 bits (484), Expect = 4.650e-56
Identity = 109/254 (42.91%), Postives = 149/254 (58.66%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTGGLYLE-HQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAW--PKKIKRGK 251
            FV SYL++HR N +  +A  A +S +++P PA +        GS       N +      V++R               R    A+A SLS+ LC++NR M E   ++    R LV+  SPDV E Y ++MN IFSAQK  V VD C +  E S+F+QQAAYLTGG+Y + +   GL QY+ + +LP  S RK LKL +Q SVDFRA CFCH+ V+  A+VC VCLS+FC+F P+C+TCG R+   P   K+GK
Sbjct:   53 FVNSYLLLHRSNRIVIIAAHAGKSAMLYPNPAHDDTS-----GSAEQSAKVNAV------VMQRLQELSDTPMDCTKPNRT---AIAASLSRALCFINRAMNEEPDLRP---RILVVQKSPDVSEHYIAIMNGIFSAQKKNVAVDACILASEQSSFMQQAAYLTGGIYYKPNDHSGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAFVCPVCLSLFCQFQPICSTCGIRSHIEPMGTKKGK 289          
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Match: M4BTB8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BTB8_HYAAE)

HSP 1 Score: 190 bits (482), Expect = 1.040e-55
Identity = 112/254 (44.09%), Postives = 150/254 (59.06%), Query Frame = 0
Query:    2 FVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNRKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTGGLYLE-HQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHK 253
            FV SYL++HR N +  +A  A +S +++P P  E+E  S   GS       N        V++R      A        R    A+A SLS+ LC++NR + E   ++    R LV+  SPDV E Y ++MN IFSAQK  V VD  +L  E S+F+QQAAYLTGG+Y + +   GL QY+ A +LP  S RK LKL +Q SVDFRA CFCH+ V+  A+VC VCLS+FCEF P+C+TCG R+  +  K G  K
Sbjct:   57 FVNSYLLLHRSNRIVIIAAHAGKSAMLYPNP--EQEDTS---GSAEQAAKVNA------GVMQRLQELSDAPLDNAKTNRT---AIAASLSRALCFINRAIHEDPELRP---RILVIQKSPDVSEHYIAIMNGIFSAQKKNVAVDACILSSEQSSFMQQAAYLTGGIYYKPNDHSGLLQYLIAIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAFVCPVCLSLFCEFRPICSTCGIRSHIQPKKTGMLK 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12605.2155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQ72_9PHAE1.620e-17895.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYW3_ECTSI1.050e-9485.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZC01_9STRA3.170e-8151.61Putative general transcription factor IIH subunit ... [more]
D7FYW4_ECTSI6.010e-6797.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WG36_GLOUD1.680e-5743.80Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XQC8_9STRA8.220e-5743.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1C5A8_PYTOL1.800e-5646.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GBC5_PHYRM3.580e-5643.70Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A3M6VU71_9STRA4.650e-5642.91Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
M4BTB8_HYAAE1.040e-5544.09Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 1..186
e-value: 6.5E-34
score: 119.5
IPR004600TFIIH subunit Tfb4/GTF2H3PFAMPF03850Tfb4coord: 2..239
e-value: 6.0E-66
score: 222.7
IPR004600TFIIH subunit Tfb4/GTF2H3PANTHERPTHR12831TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATEDcoord: 1..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12605contigEcto-sp13_S_contig12605:513..3547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12605.2155.1mRNA_Ecto-sp13_S_contig12605.2155.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12605 450..4077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12605.2155.1 ID=prot_Ecto-sp13_S_contig12605.2155.1|Name=mRNA_Ecto-sp13_S_contig12605.2155.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=266bp
MFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKE
FQNCLWDGLGRVVERGHAAGKARPGLPSMGRDEGCALAGSLSKGLCYVNR
KMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVL
GESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQ
SVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRG
KHKALTGTTVANGRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR004600TFIIH_Tfb4/GTF2H3