prot_Ecto-sp13_S_contig9909.21553.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9909.21553.1
Unique Nameprot_Ecto-sp13_S_contig9909.21553.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length206
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9909.21553.1 vs. uniprot
Match: A0A6H5L9K9_9PHAE (GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K9_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 5.050e-102
Identity = 176/187 (94.12%), Postives = 179/187 (95.72%), Query Frame = 0 
Query:   19 RGGQFQAPRLSMIENVVHPREGAAPPPAPVPTEIWKERAQSRGNLVKAMVASQHLSSSSGTGLRGASPRSNTTYMGNNFQNTSGMVGAGSTAGGRATTGIVPPETEVPLPYAEDVLALQGAAERGIKKFEVAPLSVSGQQPPRVQTARRPVVQAADNFAAEDSADEDSDETGSIISAISAGSFQPRR 205
            RGGQFQAPRL+MIENVVHPREGAAPPPAPVPTEIW ERAQSRGNLVKAMVASQHLSSSSGTGLRGASPRSNT Y G+N+ NTSGM GAGSTAGGR TTGIV PETEVPLPYAEDVLALQGAAERGIKKFEVAPLSVSGQQPPRVQTARR VVQAADNFAAEDSADEDSDETGSIISAISAGSFQPRR
Sbjct: 2590 RGGQFQAPRLAMIENVVHPREGAAPPPAPVPTEIWNERAQSRGNLVKAMVASQHLSSSSGTGLRGASPRSNTAYGGSNYHNTSGMAGAGSTAGGRGTTGIVSPETEVPLPYAEDVLALQGAAERGIKKFEVAPLSVSGQQPPRVQTARRAVVQAADNFAAEDSADEDSDETGSIISAISAGSFQPRR 2776
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9909.21553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9K9_9PHAE5.050e-10294.12GT4 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9909contigEcto-sp13_S_contig9909:424..3033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9909.21553.1mRNA_Ecto-sp13_S_contig9909.21553.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9909 238..3293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9909.21553.1 ID=prot_Ecto-sp13_S_contig9909.21553.1|Name=mRNA_Ecto-sp13_S_contig9909.21553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=206bp
MQQQPQQQPQQQQEQEQGRGGQFQAPRLSMIENVVHPREGAAPPPAPVPT
EIWKERAQSRGNLVKAMVASQHLSSSSGTGLRGASPRSNTTYMGNNFQNT
SGMVGAGSTAGGRATTGIVPPETEVPLPYAEDVLALQGAAERGIKKFEVA
PLSVSGQQPPRVQTARRPVVQAADNFAAEDSADEDSDETGSIISAISAGS
FQPRR*
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