prot_Ecto-sp13_S_contig9908.21552.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9908.21552.1
Unique Nameprot_Ecto-sp13_S_contig9908.21552.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length464
Homology
BLAST of mRNA_Ecto-sp13_S_contig9908.21552.1 vs. uniprot
Match: D8LBK3_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK3_ECTSI)

HSP 1 Score: 781 bits (2018), Expect = 1.850e-271
Identity = 431/456 (94.52%), Postives = 433/456 (94.96%), Query Frame = 0
Query:    1 MPANRSSGTLGGGLGQQSAALAGMPAAPPMPPGMGYANNGYPSAPAGGPAXXXXXXXXXXXXXLPPGTVIPQNRPLXXXXXXXXXXXLGGXXXXXXXXXXSALAAPTVPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKDGQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDIKPRTWGSKKKDNSMAAGELDMEKTDFSMTNATTFEHHNAKITAFFIQASPSSLGRECYAVSGVKKSVKEQGDIWVVAKTLKAFNRLRVAWEEDYGTSSIPVEPPPARWADCSESDWKDLKGAALRSFLEEVKHWPNLKHSQDLKHFLTTDRVNLSGGIISKKTMKPYLDAWIKTSSEPTWTLKLPPIPGKEGTGGDGGKPSAKDKKKAAIPGLRAGDESFGQLTSRRPKLRRSRVFGKVSALAAVTRQEAMLETSR 456
            MPANRSSGTLGGGLGQQSAALAGMPAAPPMPPGMGYANNGYPSAPAGGPAXXXXXXXXXXXXXLPPGTVIPQNRP XXXXXXXXXXX   XXXXXXXXXX  LAAP VPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKDGQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDI PRTWGSKKKDNSM+AGELDMEKTDFSMTNATTFEHHNAKITAFFIQ            VSGVKKSVKEQGDIWVVAKTLKAFNRLRVAWEEDYGTSSIPVEPPPARW DCSESDWKDLKGAALRSFLEEVK WPNLKHSQDLKHFLTTDRVNLSGGIISKKTMKPYLDAWIKTSSEPTWTLKLPPIPGKEGTGGDGGKPSAKDKK+A IPGLRAGDESFGQLTSRRPKLRRSRVFGKVSALAAVTRQEAMLETSR
Sbjct:    1 MPANRSSGTLGGGLGQQSAALAGMPAAPPMPPGMGYANNGYPSAPAGGPAXXXXXXXXXXXXXLPPGTVIPQNRPXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAPVVPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKDGQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDINPRTWGSKKKDNSMSAGELDMEKTDFSMTNATTFEHHNAKITAFFIQ------------VSGVKKSVKEQGDIWVVAKTLKAFNRLRVAWEEDYGTSSIPVEPPPARWVDCSESDWKDLKGAALRSFLEEVKQWPNLKHSQDLKHFLTTDRVNLSGGIISKKTMKPYLDAWIKTSSEPTWTLKLPPIPGKEGTGGDGGKPSAKDKKEATIPGLRAGDESFGQLTSRRPKLRRSRVFGKVSALAAVTRQEAMLETSR 444          
BLAST of mRNA_Ecto-sp13_S_contig9908.21552.1 vs. uniprot
Match: A0A836CBE7_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBE7_9STRA)

HSP 1 Score: 323 bits (829), Expect = 5.260e-95
Identity = 190/454 (41.85%), Postives = 240/454 (52.86%), Query Frame = 0
Query:  103 LAAPTVPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKDGQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDIKPRTWGSKKKDNS-----------------------------------------------------MAAGELDMEKTDFSMTNATTFEHHNAKITAFFIQASPSSLGRECYAVSGVKKSVK--EQGDIWVVAKTLKAFNRLRVAWEEDYGTSSIPVEPPPARWADCSESDWKDLKGAALRSFLEEVKHWPNLKHSQDLKHFLTTDRVNLSGGIISKKTMKPYLDAWIKTSSEPTWTLKLPPIPGKEGTGGDG---------------------------------------------GKPSAKDKKKAAIPGLRAGDESFGQLTSRRPKLRRSRVFGKVSALAAVTRQEAMLETSR 456
            +AAP+ P     +  +G +V FP KV YFE  ED+ G K +G LRLK   +V ++K +D  WWLGK GD+VGWVP++ +  V   + GR+    P    P+  GS K D++                                                     M AGE+DME +DF++  A TFEH  +++TAFF+Q            VSGV+K  +   +GDIW+VAKTLKAFNRLRVAWEED+G +++PVEPPPARW  C+   W  L+ AALR+ LEEVK    L+ SQDL+HFLTTDRV L+GG+I+ KTMKPYLDAW+KTSSEP WT  LPP+P        G                                             G P      K  IPGLR GDE+FG LTSRRP+ RRS  F ++ ALAAVTRQEA LE  R
Sbjct:   23 IAAPSTPDP--RQAGSGPSVKFPTKVGYFEATEDIAGSKPEGRLRLKRNAVVAIFKAEDKDWWLGKAGDEVGWVPANKIILVTDSSRGRR----PTGYLPKNEGSGKCDHAAADASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRDWEAKTEHYMTAGEIDMEASDFTLVQAKTFEHCGSRVTAFFVQ------------VSGVRKGAEGLNRGDIWIVAKTLKAFNRLRVAWEEDFGANTVPVEPPPARWDGCAPDGWDALRLAALRALLEEVKRRGALRASQDLRHFLTTDRVALAGGMINAKTMKPYLDAWVKTSSEPAWTQSLPPLPSLADAADGGXXXXAKLPAPRPVPAAAYCCRHASLRCMAPCCGXXXXXXXXXXXXGGPDGAAALKPNIPGLRPGDEAFGLLTSRRPRTRRSDTFAQIGALAAVTRQEARLEVGR 458          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9908.21552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBK3_ECTSI1.850e-27194.52SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CBE7_9STRA5.260e-9541.85SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 129..185
e-value: 4.5E-4
score: 29.5
IPR001452SH3 domainPFAMPF07653SH3_2coord: 143..184
e-value: 1.3E-7
score: 31.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 126..186
score: 14.528
NoneNo IPR availableGENE3D2.30.30.40coord: 131..204
e-value: 2.6E-10
score: 41.9
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 8..303
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 214..355
e-value: 7.6E-7
score: 30.9
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 257..350
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 143..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9908contigEcto-sp13_S_contig9908:8..5810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9908.21552.1mRNA_Ecto-sp13_S_contig9908.21552.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9908 8..5810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9908.21552.1 ID=prot_Ecto-sp13_S_contig9908.21552.1|Name=mRNA_Ecto-sp13_S_contig9908.21552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp
MPANRSSGTLGGGLGQQSAALAGMPAAPPMPPGMGYANNGYPSAPAGGPA
GGGGLPPPPPPPPLPPGTVIPQNRPLPPAMPTAGVMPLGGLPLPGAMPAA
SALAAPTVPRKVLERPANGQNVAFPNKVSYFEGAEDLPGDKEKGMLRLKD
GQMVVVYKTDDPHWWLGKVGDDVGWVPSHLLQEVDPKAPGRQQHVPPRDI
KPRTWGSKKKDNSMAAGELDMEKTDFSMTNATTFEHHNAKITAFFIQASP
SSLGRECYAVSGVKKSVKEQGDIWVVAKTLKAFNRLRVAWEEDYGTSSIP
VEPPPARWADCSESDWKDLKGAALRSFLEEVKHWPNLKHSQDLKHFLTTD
RVNLSGGIISKKTMKPYLDAWIKTSSEPTWTLKLPPIPGKEGTGGDGGKP
SAKDKKKAAIPGLRAGDESFGQLTSRRPKLRRSRVFGKVSALAAVTRQEA
MLETSRCVLATVL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR036871PX_dom_sf
IPR036028SH3-like_dom_sf