prot_Ecto-sp13_S_contig9894.21537.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9894.21537.1
Unique Nameprot_Ecto-sp13_S_contig9894.21537.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9894.21537.1 vs. uniprot
Match: A0A6H5KMI8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI8_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.440e-33
Identity = 64/75 (85.33%), Postives = 68/75 (90.67%), Query Frame = 0 
Query:   19 SAVVTTNGVVLCPIAGRKAHKRAAPSRVCVRASFREVPTVPCNFICWSIFHQQDPRTLFQFFSYKKFSALTPLTV 93
            S V   NGVVLCPIAGRKAH++AAPSRVCVR SFREVPTVPCNFI WSIFHQQDPRTLF+ FSY+KFSALTPLTV
Sbjct:    3 SRVGPRNGVVLCPIAGRKAHRQAAPSRVCVRGSFREVPTVPCNFIGWSIFHQQDPRTLFRIFSYRKFSALTPLTV 77
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9894.21537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMI8_9PHAE1.440e-3385.33C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9894contigEcto-sp13_S_contig9894:1481..1885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9894.21537.1mRNA_Ecto-sp13_S_contig9894.21537.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9894 1481..1886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9894.21537.1 ID=prot_Ecto-sp13_S_contig9894.21537.1|Name=mRNA_Ecto-sp13_S_contig9894.21537.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
ARRQQPEQEKQAIGREKKSAVVTTNGVVLCPIAGRKAHKRAAPSRVCVRA
SFREVPTVPCNFICWSIFHQQDPRTLFQFFSYKKFSALTPLTVVPIRLLL
LSCSRSPGPRTPTLDARSRARFFGAPGGAGDAATG
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