prot_Ecto-sp13_S_contig98832.21524.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig98832.21524.1
Unique Nameprot_Ecto-sp13_S_contig98832.21524.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length40
Homology
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: D8LNC1_ECTSI (RIBOSOMAL_L9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC1_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 8.350e-18
Identity = 37/40 (92.50%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            +KVILTDDV GTGYRGEYV+IRGGFMRNFLFPSKRAIYAT
Sbjct:   37 VKVILTDDVSGTGYRGEYVDIRGGFMRNFLFPSKRAIYAT 76          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A2V6R5P8_9BACT (50S ribosomal protein L9 n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6R5P8_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 1.470e-7
Identity = 24/40 (60.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            +KVIL DDVG  G+RGE  E+  G+ RNFL P KRA+ AT
Sbjct:    1 MKVILLDDVGTLGHRGEVREVSDGYARNFLIPQKRALTAT 40          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: C7GYV7_9FIRM (50S ribosomal protein L9 n=1 Tax=Eubacterium saphenum ATCC 49989 TaxID=592031 RepID=C7GYV7_9FIRM)

HSP 1 Score: 52.0 bits (123), Expect = 6.430e-7
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            +KVIL +DV GTGY G+ VE++ GF R+ L PSK AI AT
Sbjct:    1 MKVILKEDVRGTGYEGDVVEVKDGFARHKLIPSKLAIKAT 40          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A1V5CWW1_9DELT (50S ribosomal protein L9 n=1 Tax=Syntrophorhabdus sp. PtaU1.Bin058 TaxID=1811704 RepID=A0A1V5CWW1_9DELT)

HSP 1 Score: 51.2 bits (121), Expect = 8.360e-7
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            +KVILT+D+ GTG +GE V ++ G+ RNFL P  RAI AT
Sbjct:    1 MKVILTEDLKGTGKKGEVVNVKDGYGRNFLIPDGRAIPAT 40          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A3R6VCN3_9STRA (RIBOSOMAL_L9 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VCN3_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 1.450e-6
Identity = 19/40 (47.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            ++V+L +DV   G+RG+ V ++ G+ RNFL+P K+A+YAT
Sbjct:   18 VEVVLKEDVPKLGFRGDVVSVKAGYARNFLYPEKKAVYAT 57          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A3M6VRU6_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU6_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.740e-6
Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            + ++L +DVG  GYRG+ V ++ G+ RN+L+P K A+YAT
Sbjct:   28 VSMVLKEDVGNLGYRGDEVFVKAGYARNYLYPEKLAVYAT 67          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A485KPG0_9STRA (Aste57867_10078 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPG0_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.510e-6
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    3 VILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            ++L +DV   G+RG+ V ++ GF RNFL+P K+A+YAT
Sbjct:    1 MVLKEDVPKLGFRGDVVSVKAGFARNFLYPQKKAVYAT 38          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A847C9J3_9FIRM (50S ribosomal protein L9 (Fragment) n=1 Tax=Oscillospiraceae bacterium TaxID=2485925 RepID=A0A847C9J3_9FIRM)

HSP 1 Score: 48.1 bits (113), Expect = 3.610e-6
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            +KV+L  D+ GTG R E VE+  G+ RNFLFP K A  AT
Sbjct:    1 MKVVLLQDIKGTGKRDELVEVSDGYARNFLFPRKLAKEAT 40          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A397ERT2_9STRA (RIBOSOMAL_L9 domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ERT2_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 3.960e-6
Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    3 VILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            V+L +DV   G+RG+ V ++ G+ RNFL+P K+A+YAT
Sbjct:   23 VVLKEDVPKLGFRGDVVAVKAGYARNFLYPEKKAVYAT 60          
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Match: A0A6G0XWF7_9STRA (RIBOSOMAL_L9 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWF7_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 4.070e-6
Identity = 18/40 (45.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    1 LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT 40
            ++++L +DV   G+RG+ V ++ G+ RNFL+P K+A+YAT
Sbjct:   22 VEMVLKEDVPKLGFRGDVVSVKAGYARNFLYPEKKAVYAT 61          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98832.21524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC1_ECTSI8.350e-1892.50RIBOSOMAL_L9 domain-containing protein n=2 Tax=Ect... [more]
A0A2V6R5P8_9BACT1.470e-760.0050S ribosomal protein L9 n=2 Tax=Candidatus Rokuba... [more]
C7GYV7_9FIRM6.430e-760.0050S ribosomal protein L9 n=1 Tax=Eubacterium saphe... [more]
A0A1V5CWW1_9DELT8.360e-757.5050S ribosomal protein L9 n=1 Tax=Syntrophorhabdus ... [more]
A0A3R6VCN3_9STRA1.450e-647.50RIBOSOMAL_L9 domain-containing protein n=2 Tax=Aph... [more]
A0A3M6VRU6_9STRA1.740e-647.50RIBOSOMAL_L9 domain-containing protein n=1 Tax=Per... [more]
A0A485KPG0_9STRA2.510e-650.00Aste57867_10078 protein n=1 Tax=Aphanomyces stella... [more]
A0A847C9J3_9FIRM3.610e-655.0050S ribosomal protein L9 (Fragment) n=1 Tax=Oscill... [more]
A0A397ERT2_9STRA3.960e-650.00RIBOSOMAL_L9 domain-containing protein n=5 Tax=Aph... [more]
A0A6G0XWF7_9STRA4.070e-645.00RIBOSOMAL_L9 domain-containing protein n=1 Tax=Aph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036935Ribosomal protein L9, N-terminal domain superfamilyGENE3D3.40.5.10coord: 1..40
e-value: 5.4E-13
score: 50.2
IPR020070Ribosomal protein L9, N-terminalPFAMPF01281Ribosomal_L9_Ncoord: 2..40
e-value: 4.8E-16
score: 58.1
IPR020070Ribosomal protein L9, N-terminalPROSITEPS00651RIBOSOMAL_L9coord: 13..40
IPR000244Ribosomal protein L9PANTHERPTHR2136850S RIBOSOMAL PROTEIN L9coord: 1..40
NoneNo IPR availablePANTHERPTHR21368:SF1839S RIBOSOMAL PROTEIN L9, MITOCHONDRIALcoord: 1..40
IPR009027Ribosomal protein L9/RNase H1, N-terminalSUPERFAMILY55658L9 N-domain-likecoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig98832contigEcto-sp13_S_contig98832:389..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig98832.21524.1mRNA_Ecto-sp13_S_contig98832.21524.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig98832 389..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig98832.21524.1 ID=prot_Ecto-sp13_S_contig98832.21524.1|Name=mRNA_Ecto-sp13_S_contig98832.21524.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp
LKVILTDDVGGTGYRGEYVEIRGGFMRNFLFPSKRAIYAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036935Ribosomal_L9_N_sf
IPR020070Ribosomal_L9_N
IPR000244Ribosomal_L9
IPR009027Ribosomal_L9/RNase_H1_N