prot_Ecto-sp13_S_contig9873.21517.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9873.21517.1
Unique Nameprot_Ecto-sp13_S_contig9873.21517.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length220
Homology
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: D8LE66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE66_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 3.110e-73
Identity = 142/204 (69.61%), Postives = 144/204 (70.59%), Query Frame = 0
Query:   17 SAKWASDDDGQDDAGNGSPLTPNSPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIEGGSNRANRRNHFDNEETEILVIPDLDDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQEFNA 220
            S+KWASDDDGQDDAGNGSPLTPNSPP                                                         XXXXXXXXXXX PIEGGSNRANRRNHFDNEETEILVIPDL+DEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPS ADGLDMSLLTKTLVP EMLEEDDSPWEFDSLLQSVTQEFNA
Sbjct:    2 SSKWASDDDGQDDAGNGSPLTPNSPPYEHKDSGSGGGRRSRRPRPGRDDIDAAAAEKDRPPVKTVAGGWELDGAGSASSEAQKXXXXXXXXXXXKPIEGGSNRANRRNHFDNEETEILVIPDLEDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSGADGLDMSLLTKTLVPSEMLEEDDSPWEFDSLLQSVTQEFNA 205          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A7S2Y124_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y124_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.600e-32
Identity = 61/103 (59.22%), Postives = 81/103 (78.64%), Query Frame = 0
Query:  118 NRANRRNHFDNEETEILVIPDLDDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQEFNA 220
            N   RR  +D+E TE+++IPD+D+E EED+ TKVAAAP+NT +RV SLREL+ DLK  + S+A+G+D+SLLT  LVP + L+E+D  W FD+LLQ VTQEFNA
Sbjct:   77 NEGRRRARWDDEATELIIIPDMDEEAEEDITTKVAAAPRNTAKRVQSLRELEHDLKMTVTSSANGIDLSLLTAHLVPAQQLQEEDITWHFDALLQEVTQEFNA 179          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A836CKA7_9STRA (Intraflagellar transport protein 43-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.600e-31
Identity = 59/89 (66.29%), Postives = 74/89 (83.15%), Query Frame = 0
Query:  132 EILVIPDLDDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQEFNA 220
            ++LVIPDL++ G +D    VAAAP+NT RRVPSLRELD  +++ IPSAA+GLDMS+LTKTLVPP +L+E DS WEFD+LLQ VTQ +NA
Sbjct:   21 DVLVIPDLEEGGADDFAHTVAAAPRNTARRVPSLRELDHAIRFTIPSAAEGLDMSMLTKTLVPPHVLQEPDSLWEFDTLLQEVTQAYNA 109          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A7S3YC96_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC96_HETAK)

HSP 1 Score: 118 bits (296), Expect = 9.260e-30
Identity = 62/100 (62.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query:  122 RRNHFDNE-ETEILVIPDLDDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQEFNA 220
            RR  +D+E  TEIL+IPDL++E EED+ T+VAAAP+NT +RV SLREL+ DLK  + S+ +G+D+S LT  LVP EMLEE+D  W+FDSLLQ VTQE+NA
Sbjct:   81 RRARWDDEGATEILLIPDLEEEAEEDITTQVAAAPRNTAKRVQSLRELENDLKMTVSSSENGIDLSALTAHLVPAEMLEEEDVLWDFDSLLQEVTQEYNA 180          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A7S2SRC7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRC7_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.480e-28
Identity = 64/106 (60.38%), Postives = 80/106 (75.47%), Query Frame = 0
Query:  119 RANRRN--HFDNEETEILVIPDLDDEGE--EDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQEFNA 220
            R  R+N    ++E TEIL+IPDLDDE    ED+ T+VAAAP+N  RRV SL++LD D+KY +PS A G+D+S+LT +LVPP M+ EDD  WEFDSLLQ VT EFNA
Sbjct:  105 RGRRKNLRDMEDEATEILMIPDLDDEENDAEDITTQVAAAPRNLARRVQSLQQLDHDIKYTVPSGA-GIDLSILTSSLVPPTMVREDDVLWEFDSLLQEVTHEFNA 209          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A7S2D6Z0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6Z0_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.000e-25
Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 0
Query:  119 RANRRNHF-DNEETEILVIPDLDDEGEEDVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQEFNA 220
            R   R+H  DN+   +++IPDLD+E  ED+  +VA AP+N  RRV SL++LD ++KY +PS   GLD+S+LT +LVPPEM++E D+ WEFD+LLQ VTQEF A
Sbjct:  151 RKGLRDHEEDNDADVVMIIPDLDEEEAEDLTAQVAVAPKNLARRVQSLQQLDHEIKYTLPSGG-GLDLSILTASLVPPEMVQEADATWEFDTLLQEVTQEFTA 252          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A1V9YYR3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYR3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.480e-20
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 0
Query:  116 GSNRANRRNHFDN--EETEILVIPDLDDEGEE-DVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQE 217
            G     +  HFD+  E TEI+ IPDL++E  E D+ T++A AP+NTTR V SL+EL+ D+KYA+PS    +D+ LLT  L P   + EDD PW+FDSLL+ V QE
Sbjct:   86 GETAKPKNRHFDDDGEATEIVEIPDLEEEEREPDITTQIADAPRNTTRVVQSLKELERDVKYALPSTG-SIDLQLLTSFLCPQRAVIEDDDPWDFDSLLRDVFQE 189          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A0P1B1L7_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1L7_PLAHL)

HSP 1 Score: 92.4 bits (228), Expect = 2.040e-19
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 0
Query:  113 IEGGSNRANRRNHF---DNEETEILVIPDLDDEGEE-DVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAA-DGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQE 217
            +   + R N++N +   D+E T+I+ IPDL++E  E D+ T +A AP+NTTR V SL++LD D+K+A+PSA   G+D+ LLTK L P   + EDD  W FD+LL  +  E
Sbjct:   91 VNSSNERRNQKNRYFEDDDEITDIMEIPDLEEEEREPDITTIIAKAPRNTTRAVQSLKQLDNDIKFALPSAQIHGIDLHLLTKNLCPESAVLEDDEVWNFDTLLNDIAHE 200          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: A0A024TT05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TT05_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.630e-19
Identity = 48/99 (48.48%), Postives = 74/99 (74.75%), Query Frame = 0
Query:  122 RRNHFDN--EETEILVIPDLDDEGEE-DVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQE 217
            +  HFD+  E TE++ IPDL++E  E D+ T++A AP+NTTR V SL+EL+ D+KY++P+ A G+D+++LT  L P + ++EDD  W+FDSLL+ V Q+
Sbjct:   91 KNKHFDDDGEATELMEIPDLEEEEREPDITTQIADAPRNTTRVVQSLKELERDVKYSLPTTA-GVDLTILTSFLCPQKAVQEDDDAWDFDSLLRDVFQD 188          
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Match: W4FPL9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPL9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.920e-19
Identity = 48/99 (48.48%), Postives = 73/99 (73.74%), Query Frame = 0
Query:  122 RRNHFDN--EETEILVIPDLDDEGEE-DVETKVAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEEDDSPWEFDSLLQSVTQE 217
            +  HFD+  E TE++ IPDL++E  E D+ T++A AP+NTTR V SL+EL+ D+KY++P+ A G+D+ +LT  L P + ++EDD  W+FDSLL+ V Q+
Sbjct:   92 KNKHFDDDGETTELMEIPDLEEEEREPDITTQIADAPRNTTRVVQSLKELERDVKYSLPTTA-GVDLQILTSFLCPQKAVQEDDDAWDFDSLLRDVFQD 189          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9873.21517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE66_ECTSI3.110e-7369.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2Y124_9STRA5.600e-3259.22Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CKA7_9STRA5.600e-3166.29Intraflagellar transport protein 43-domain-contain... [more]
A0A7S3YC96_HETAK9.260e-3062.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2SRC7_9STRA1.480e-2860.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D6Z0_9STRA6.000e-2554.37Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1V9YYR3_9STRA4.480e-2050.48Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A0P1B1L7_PLAHL2.040e-1945.45Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A024TT05_9STRA2.630e-1948.48Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4FPL9_9STRA3.920e-1948.48Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029302Intraflagellar transport protein 43PFAMPF15305IFT43coord: 94..219
e-value: 3.7E-37
score: 127.5
IPR029302Intraflagellar transport protein 43PANTHERPTHR33724FAMILY NOT NAMEDcoord: 45..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9873contigEcto-sp13_S_contig9873:1..2892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9873.21517.1mRNA_Ecto-sp13_S_contig9873.21517.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9873 1..2892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9873.21517.1 ID=prot_Ecto-sp13_S_contig9873.21517.1|Name=mRNA_Ecto-sp13_S_contig9873.21517.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bp
RELKLARDSLNTRIMSSAKWASDDDGQDDAGNGSPLTPNSPPSEHKDSSS
GGGRRSRRPRPGRDDIDAAAAKKDRPPVKTVAGGWELDGAASTSSEAQRK
SGGHTTTTQQKPIEGGSNRANRRNHFDNEETEILVIPDLDDEGEEDVETK
VAAAPQNTTRRVPSLRELDEDLKYAIPSAADGLDMSLLTKTLVPPEMLEE
DDSPWEFDSLLQSVTQEFNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029302IFT43