prot_Ecto-sp13_S_contig126.2150.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig126.2150.1
Unique Nameprot_Ecto-sp13_S_contig126.2150.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1043
Homology
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: D7FQA4_ECTSI (Cleavage and polyadenylation specificity factor subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA4_ECTSI)

HSP 1 Score: 1414 bits (3661), Expect = 0.000e+0
Identity = 918/1002 (91.62%), Postives = 932/1002 (93.01%), Query Frame = 0
Query:    1 MAQPLDAARLAHDLSKRIMKHPGATAAAAVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDEVGVPPGEQQPPAAGVAAHPASAPRTSGGAVDRSSSKGCKGGTTEKKAGGRSGGGRSKGKVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRK-REEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKMEYRKSEAGRRAAATDAAAAAGRGARVGYSGAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMVPVTVPVRVPLTGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRAIVASLFSKYSKPQHLMFGYYDPQVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQR--EPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVNLAPKMLIVTGGSRRAKAELVSHVRQAVEPVVAGRRGRGGGXXXXXXXXXXXXXXXXEGEEEDIACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLNNYGVAHVECRVDPRGDVPLLCAKPRVERVGHPAMFLSVGKVNVTPQILQAFKKAKVSFEFVA 999
            MAQPLDAARLAHDLSKR+M H GATAA AVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDE+GVP GEQQPPAAGVAAHPASAPRTSG AVD SSS                   RSKGKVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDT LLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYN+DHERHLRASALGTLTRPSVLITDAHNALTGGGM RKD        ++KRK RE ELI+TVMDTVRGGGNVLLPTDTAGRVLELLVLLND+WQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAK EYRKSEAGRRAAA DAAAAAGRGARVGYSGAVGA XXXXXXXXXXXXXXXXXXXXXXXXXXXX SM+VPVTVPVRVPL GEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRAIVASLFSKYSKPQHLMFGYYDP VPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    EPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAV LAPKMLIVTGGSRRAKAELVS+VR AVEP  AGRR     XXXXXXXXXXXXXXXX     D+ACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQL+NYGVAHVECRVDPRGDVPLLCAKPR ERVGHPAMFLSVGKVNVTPQILQ      +S  F++
Sbjct:    1 MAQPLDAARLAHDLSKRMMNHHGATAA-AVPGKAPLKLLQWALSQLEECARTRSVPASNVVEVAMAAIKDEMGVPAGEQQPPAAGVAAHPASAPRTSGSAVDGSSSXXXXXXXXXXXXXXXX---RSKGKVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTALLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNNDHERHLRASALGTLTRPSVLITDAHNALTGGGMIRKD-------PSSKRKLREVELISTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDYWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKSEYRKSEAGRRAAAKDAAAAAGRGARVGYSGAVGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXASMVVPVTVPVRVPLAGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRRAIVASLFSKYSKPQHLMFGYYDPHVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPVVDALRASAGEGKESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVTLAPKMLIVTGGSRRAKAELVSYVRHAVEPAAAGRRAXXXXXXXXXXXXXXXXXXXXXXXXXDVACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLDNYGVAHVECRVDPRGDVPLLCAKPRAERVGHPAMFLSVGKVNVTPQILQVNWLETISQSFMS 991          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: A0A836CFV8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFV8_9STRA)

HSP 1 Score: 646 bits (1666), Expect = 4.470e-215
Identity = 419/935 (44.81%), Postives = 526/935 (56.26%), Query Frame = 0
Query:  131 VVFTPLYGC-DEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGN--FQAFDLDDVDAAFARFKTLKFSQHLTFS--GRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKMEYRKSEAGRRAAATDAAAAAGRGARVGYSGAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMMVPVTVPVRVPLTGEELKAFRDEENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KRRRAIVASLFSKYSKPQHLMFGYYDPQVPTDEYGVKETEPIGWLAAAMQQQNSEMPAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQREPVVDALRASAGEG--KESAFFQDSGAVPTKLEQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVNLAPKMLIVTGGSRRAKAELVSHVRQAVEPVVAGRRGRGGGXXXXXXXXXXXXXXXXEGEEEDIACRFVVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLNNYGVAHVECRVDP------------RGDVPLLCAKPRVER--VGHPAMFLSVGKVNVTPQILQAFKKAKVSFEFVAGKVLLEGGVTVSQGKGGKIELEGPLCDSYFRVRDIIYGEYIVV 1042
            V FTPLYGC D+   G  PV S+LEVG VTILLDCGWDI FD +LL PL  VV R+DLVLISH DLEHLGGLPYA GKLG++A V+ATLP  KMGQM VYDA+  R+ E N  F+AF LDD DAAF RF+ LK+SQHL FS  GRGAGVTITPYAAG +IG ++WR+ WQT+DNDIVYA +YNH  E HL   A+ TL+RPS++ITDAH  LT              Q    RKR  +L   V  TVR GGNVLLP DTAGRVLELL+LL+ HW +++LGSY LVLLH+ AFNT EFAKSQLEWMS+ I + FDLQRSNPFE+R+V + HSLEEL  LG  P VV+ATD+SLDFGF+KALLL WA+   N +LLT RGHG++ AR L+  +           A   AAAAAG                                              + V VP RVPL GEEL A+ +E   XXXXXXXXXXXXXX             XXXXXXXXXX       KRRR + ASLFSK+SKPQHLMFG++D  V  D+YGV+E EPI WLA +MQ++N                                                                   +  V A  A+A      +SAF++D+G +P+K+  + +EL V  RV Y+D EGLSDG SV+N    + P+ L++ GGS +A + L    R                                    +   C  V   ++ + V  ALD+  FDVL+HDSL+T L+W+ +  Y +A V+  V P            R   P+L      E    G PA+F+S G V +T Q+  A +KA ++    A K+ + G + V++G  G ++++GPL D+YF VR I+Y +Y +V
Sbjct:   48 VTFTPLYGCFDDTGRGAGPVCSLLEVGDVTILLDCGWDIDFDESLLAPLASVVSRVDLVLISHADLEHLGGLPYAVGKLGLKAPVFATLPTLKMGQMTVYDAHQMRSLEANGTFKAFTLDDADAAFERFQPLKYSQHLRFSEGGRGAGVTITPYAAGHIIGGSLWRICWQTDDNDIVYAVSYNHRREEHLNGGAVETLSRPSIMITDAHQVLT-------------MQPKPPRKRASDLTEMVTATVRKGGNVLLPCDTAGRVLELLLLLDHHWTRNKLGSYPLVLLHSMAFNTGEFAKSQLEWMSDAISKQFDLQRSNPFEMRHVAMAHSLEELQALGTGPMVVLATDLSLDFGFAKALLLAWAADPLNLVLLTQRGHGDSVARELLRGVT----------AHVRAAAAAG-------------------------------------GVEEAPKQRIVVEVPERVPLVGEELTAYLEEXXXXXXXXXXXXXXXXXAEEMERGQGLADSXXXXXXXXXXAAVAHVNKRRRLVNASLFSKFSKPQHLMFGFHDAMVEVDDYGVREAEPIAWLAVSMQERNDTS-------------------------------GLIHEEGQRRLLEQQATAAHLSSAMQVVGLSDADGAVSAATAAAQTALRSDSAFYEDTGVLPSKVVLQERELVVRARVAYIDMEGLSDGRSVRNLLATVGPRQLVLVGGSVKAVSALSEDAR------------------------------------DRHICSAVFTPRSGDTVRAALDTDVFDVLVHDSLYTRLRWQSVKGYELAQVDSAVAPQPRPSGVLGKRERPPPPILFPPQDREEGETGRPAVFVSFGDVQLT-QLSTALRKAGMTTALAAAKLTVSGTIVVTKGADGLLKIDGPLSDTYFAVRSIMYRQYTIV 854          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: A0A6U9RRA8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RRA8_9CHLO)

HSP 1 Score: 355 bits (912), Expect = 1.960e-105
Identity = 181/393 (46.06%), Postives = 251/393 (63.87%), Query Frame = 0
Query:  130 KVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKMEYRKSE 522
            +  F PL G      G EP+  +LEV     LLDCGWD   +   L+ L   V+++D VL+SH D +HLG LPYA GKLG+   VYATLPV KMGQM +YD Y+S+  E  ++ F+L+DVD AF  F  ++++Q +  +G+G G+TITP+ AG  +G   WR++ + ED  I+YA  YNH  ERHL  +AL T  RP+VLITDA+N LT              + T+++ R+  L+  VM T+R GGNVL+P DTA RVLELL++L+ HW+  ++G Y LVLL+N A+N  EFAKS LE+M+ DI ++F+  R N F+ +NVH+ HSLEEL+EL D PKVV+A+  SL+ G  + LL+ WAS   N IL   R    T +  +   M+  ++E
Sbjct:   15 RTRFVPLCGVH----GQEPMCYLLEVDAFVFLLDCGWDDRTEVMDLKELEAHVEKVDAVLVSHADTKHLGALPYAVGKLGLDCPVYATLPVHKMGQMVLYDLYLSKRAEEEYETFNLNDVDRAFGMFNPMRYAQQINLTGKGEGITITPFPAGHSVGGTTWRITKEAED--ILYAVDYNHRKERHLNGAALHTFNRPAVLITDAYNGLT--------------EQTSRKLRDRTLVAGVMQTLRSGGNVLIPVDTATRVLELLLVLDSHWEHQKIGLYSLVLLNNVAYNVVEFAKSMLEFMNSDISKSFEHTRDNVFDCKNVHLCHSLEELEELPDQPKVVLASMASLEAGLGRNLLVDWASDPDNLILFVERAQAGTLSSFIQTYMDSDETE 387          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: C1FDL7_MICCC (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FDL7_MICCC)

HSP 1 Score: 354 bits (909), Expect = 3.360e-104
Identity = 180/373 (48.26%), Postives = 243/373 (65.15%), Query Frame = 0
Query:  130 KVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGR 502
            ++ F+PLYG      G +P   +L++ G  ILLDCGW+  FD  LLEPL +V   +D VLISHPD EHLG LPYAFGKLGMR KVYATLPV KMG M +YD ++SR    +F+ F LDD+D AF+ F  ++++Q     G GAG+TITPYAAG M+G A+W+V  +T+D  +VYA  +NH  E+HL  + L ++ RP+VLITDA NA               R+    + RE +LI  ++ TVR  GNVL+P D AGRVLELL++L + W + +L +Y+LVLL   A+NT EFA+S LEWM E +G+ FD +R N F  R++ + HS++E   L   PKVV+A+  SLD G S+ + + WA    N I+ T R
Sbjct:    7 RIKFSPLYGVQ--GIGEDPFCYVLDLDGFKILLDCGWNDSFDVNLLEPLAKVAAEVDAVLISHPDTEHLGALPYAFGKLGMRCKVYATLPVHKMGLMFMYDHFLSRNANEDFRVFTLDDIDTAFSAFVPVRYAQRSALVGHGAGITITPYAAGHMLGGALWKVHKETDD--VVYAVNFNHRREKHLNGTVLESIKRPAVLITDASNA---------------RRLPPSKTRENDLIEAILRTVRQDGNVLIPIDPAGRVLELLLVLEERWSQKQLAAYQLVLLTKVAYNTLEFARSHLEWMGEHVGQYFDRERHNAFNTRHLKLCHSIDEFRALPQGPKVVLASFGSLDAGASRHIFVEWAPDPRNLIVFTDR 360          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: A0A6B2KYM6_9EUKA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KYM6_9EUKA)

HSP 1 Score: 347 bits (890), Expect = 4.360e-102
Identity = 188/383 (49.09%), Postives = 247/383 (64.49%), Query Frame = 0
Query:  131 VVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLI 513
            + F+PL G    A   +P+  +LE+    ILLDCGW+  +D  LL+PL+ VV +I+ VLISHPDL HLG LPYA GKLG++AK+  T+PV+KMGQM +YDAY SR +   F  F+LDDVDAAF  F  LK+SQ  T SG+G  + ITPYAAG +IG  +W++  +T++  I+YA  YNH  ERHL  + L TLT+P++LITDA NAL               QD+ +  R+  LI ++  T+R GGNVLLP DTAGRVLELLV+L+ HW  H   SY L+ L+N A+NT EFAKSQLEWMSE I   F   R N F+  NV + H   E++E    PKVV+A+  SL+ GF++ + + W S   N I+ T      T AR L+
Sbjct:    5 IKFSPLCG----AYNEDPLCYLLEIDEYRILLDCGWNDDYDVQLLKPLKRVVGKINAVLISHPDLHHLGALPYAVGKLGLKAKIIGTIPVYKMGQMFMYDAYQSRQNSEEFTVFNLDDVDAAFDNFVQLKYSQRYTLSGKGIKLEITPYAAGHLIGGTIWKIKRETDE--IIYAVDYNHKKERHLSPTILETLTQPTLLITDALNALNS-------------QDS-RGNRDSLLIESITSTLRAGGNVLLPVDTAGRVLELLVILDQHWS-HFHYSYPLLFLNNVAYNTIEFAKSQLEWMSEAIMNKFISHRENCFQFSNVKLCHKTSEVNEF-PSPKVVLASMSSLNSGFAQDIFVEWCSDAKNRIIFTDTSRPGTIARRLM 365          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: A0A7S0N1Z8_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1Z8_9CHLO)

HSP 1 Score: 337 bits (863), Expect = 5.750e-102
Identity = 186/389 (47.81%), Postives = 246/389 (63.24%), Query Frame = 0
Query:  130 KVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQH--LTFS-GRG--AGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLI 513
            ++ FTPL     GA    P+S +LE+    ILLDCGW+   D   ++P+ + V  ID VL+SH D  HLG LPY  GK G++A VYATLPV KMGQM +YD Y+SR    +  AFDLDDVDAAFA    LK+SQH  LT S GR   A VT+TPY AG ++G  +W++S +TED  +VYA  +NH  ERHL  + L +  RPS+LITDA NA                +   +  R++EL  TV   +RGGG+VL+P DTAGRVLEL++ L  +W   +L SYKLVLL N A+NT EFAKS +EWM++ I   FD  R+N F+ R++H+ HS+EEL  LG  PK+VMA+  SL+ G ++ L + WA+   N +L    G  NT AR ++
Sbjct:    6 RIQFTPL----NGAHSETPLSYLLEIDDFKILLDCGWNDKLDLADIQPIVDRVPEIDAVLLSHSDTTHLGALPYLVGKKGLKAPVYATLPVHKMGQMYMYDHYLSRQAGEDQTAFDLDDVDAAFALITPLKYSQHVHLTASHGRSTSAAVTVTPYNAGHLLGGTLWKISKETED--VVYAVDFNHKKERHLNGTVLESFNRPSLLITDAFNAAN--------------RPPARAARDKELTDTVAKVLRGGGSVLIPIDTAGRVLELVLHLEQYWTVAKLASYKLVLLTNVAYNTMEFAKSHIEWMNDAISTTFDQTRTNAFKTRHLHLCHSVEELAGLGPGPKLVMASMQSLEVGPARELFVTWATNPRNLLLFPDMGQPNTLAREVM 374          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: UPI00155AE16F (probable cleavage and polyadenylation specificity factor subunit 2 isoform X2 n=1 Tax=Drosophila subobscura TaxID=7241 RepID=UPI00155AE16F)

HSP 1 Score: 328 bits (842), Expect = 5.190e-99
Identity = 167/374 (44.65%), Postives = 238/374 (63.64%), Query Frame = 0
Query:  142 GATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLG--SYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLI 513
            GA    P   IL++  V ILLDCGWD  FD   ++ L+  V  +D VL+SHPD  HLG LPY  GKLG+   +YAT+PV+KMGQM +YD Y+S  + G+F  F LDDVD AF +   LK++Q ++  G+G G++ITP  AG MIG  +W++  +  + DIVYAT +NH  ERHL    L  L RPS+LITDA+NA                Q   +R R+E+L+T ++ TVR  GNVL+  DTAGR+LEL  +L+  W+    G  +Y L LL+N ++N  EFAKSQ+EWMS+ + +AF+  R+NPF+ +++ + H+L ++ +L   PKVV+A+   L+ GF++ L ++WAS   N+I+LT R    T A  L+
Sbjct:   12 GAMDESPPCYILQIDDVRILLDCGWDEKFDPNFIKELKRQVHTLDAVLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVDTAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIV-KVGEEDIVYATDFNHKKERHLSGCELDRLQRPSLLITDAYNAQY--------------QQARRRARDEKLMTNILQTVRNNGNVLIAADTAGRMLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVVEFAKSQIEWMSDKLTKAFEGARNNPFQFKHIQLCHTLADVYKLPAGPKVVLASTPDLESGFTRDLFIQWASNANNSIILTTRTSPGTLAMDLV 370          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: A0A7S0WC87_9CHLO (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WC87_9CHLO)

HSP 1 Score: 339 bits (870), Expect = 8.410e-99
Identity = 178/374 (47.59%), Postives = 236/374 (63.10%), Query Frame = 0
Query:  130 KVVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQ-AFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGR 502
            KV+ TPLYG      G +P+   + + G  ILLDCGW+  FD  LL PL  +   ID VLISHPD  HLG LPYAFGKLGM  KVYATLPV KMGQM +YD +++R  + +FQ  F LDDVD AFA F  +KF Q     G+G G+T+T YAAG  +G AVW++    ED  +VYA  YN   ERHL  +A   + RP++LITDA N               GR    K  R+ +L   ++ +VR  GNVL+P D AGRVLEL++LL + W + +LGSY+++LL N A+NT +FAKS LEWM E +  AF+ +R NPF+ + + + HS+EEL  L   PKVV+A+  SL+ G ++ L   WA   +N ++LTG+
Sbjct:   28 KVLVTPLYG----VKGEQPMCYHVSIDGCNILLDCGWNDQFDVDLLAPLAAIAPTIDAVLISHPDTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQCDFQETFSLDDVDTAFAAFVPVKFMQLSMLRGKGEGITVTAYAAGHTLGGAVWKIGKDAED--VVYAVDYNVRKERHLNGTAFDAIHRPALLITDACNV--------------GRAVPNKATRDAQLTEAILSSVRKNGNVLIPIDPAGRVLELILLLEEKWAQRQLGSYQIILLTNVAYNTIDFAKSHLEWMGEGVTTAFERKRENPFDTKFLTLCHSMEELKALPAGPKVVLASFGSLEAGPARHLFAEWADNASNLVILTGQ 381          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: A0A7R9T8A6_MICPS (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9T8A6_MICPS)

HSP 1 Score: 342 bits (878), Expect = 9.100e-99
Identity = 175/382 (45.81%), Postives = 247/382 (64.66%), Query Frame = 0
Query:  131 VVFTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRKGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTL 512
            V  TPLYG      G +P+S +L+  G  ILLDCGW+      +L+PL +V   +D VL+SHPD EHLG LPYAFGKLG+  KVYATLPV KMG M +YD ++SR+++ +F  F LDDVD AF  F  ++++QH    G G G+++T +AAG M+GA VW+V   +ED  ++YA  YNH  E+HL  + L +L RPSVLITD+ +                 ++   + R++E++  ++ +VR  GNVL+P D AGRVLELL+LL ++W + +LG+Y+LVLL   A+NT EFA+S LEWM E++ R FD+ R N F+ R + + HS+EEL  L   PKVV+++  SL+ G S+ L + WAS   N I+LT R    T +R +
Sbjct:   94 VKVTPLYG----VYGEDPLSYLLDWDGCKILLDCGWNDRLIVEMLDPLAQVAPSVDAVLVSHPDTEHLGALPYAFGKLGLNCKVYATLPVHKMGLMYMYDHFLSRSYDTDFTLFSLDDVDKAFGSFVPVRYAQHSALEGNGHGISVTAHAAGHMLGATVWKVHKDSED--VLYAVDYNHRKEKHLNGTTLESLKRPSVLITDSLSVT---------------REVQSKTRDDEIMNVILRSVRQDGNVLIPIDPAGRVLELLLLLEENWSQKQLGAYQLVLLSTVAYNTLEFARSHLEWMGENVSRNFDIDRHNVFKTRYLTLCHSIEELHALRPGPKVVLSSFGSLECGASRHLFVEWASDPRNLIILTDRTEPGTLSREV 454          
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Match: M2XHI7_GALSU (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHI7_GALSU)

HSP 1 Score: 337 bits (865), Expect = 1.510e-98
Identity = 183/389 (47.04%), Postives = 243/389 (62.47%), Query Frame = 0
Query:  133 FTPLYGCDEGATGVEPVSSILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGGLPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVDAAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDNDIVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNR---KGRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQKHRLGS-YKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRNVHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLTGRGHGNTTARTLIAKME 517
            FTPLYG     T    V  +LE+    ILLDCGW+  F+ TLLEPLR +  R+D VLISHPDL HLG LPYA  KLG+RA  YATLPVW+MGQ+ +YDA+ SR  + +FQ FDLDDVD+AF  F  LK+ Q + FS RG G+TITP+ AG MIG  VW++  Q+E  +IVYA  +NH  ERHL  + L  LTRPS LI  A  AL     S     +   KG Q  ++     E+    + T+R GG+V++P DTAGRVLEL +   D W   +LGS Y + ++ + +FNT +FAKS +EWMS+ +   FD  R NPF L+++H+ HS  EL  L   PKV++ +  SL+ GFS+ L++   S   N ++L  R   NT A ++   +E
Sbjct:    7 FTPLYGVK---TEDLAVCYLLEIDDFRILLDCGWNDRFEETLLEPLRRIAPRVDAVLISHPDLFHLGALPYAVAKLGLRAPTYATLPVWRMGQLFMYDAHQSRAMQEDFQVFDLDDVDSAFENFIQLKYQQIVNFSERGKGITITPHPAGHMIGGTVWKI--QSETEEIVYANDFNHKRERHLNPTTLQYLTRPSHLIISASQALVRPSSSSSISGQQFPKGSQIYSRSNPLTEICEEALSTLRQGGDVVIPVDTAGRVLELALGFEDFWATEKLGSSYAVAIIEHVSFNTIDFAKSMMEWMSDAVINKFDTTRENPFHLKHIHLCHSRSELSSLLS-PKVILTSVASLECGFSRELVVEMVSNKKNKLILVDRLEPNTLAHSIYNVLE 389          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig126.2150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA4_ECTSI0.000e+091.62Cleavage and polyadenylation specificity factor su... [more]
A0A836CFV8_9STRA4.470e-21544.81Cleavage and polyadenylation specificity factor su... [more]
A0A6U9RRA8_9CHLO1.960e-10546.06Cleavage and polyadenylation specificity factor su... [more]
C1FDL7_MICCC3.360e-10448.26Cleavage and polyadenylation specificity factor su... [more]
A0A6B2KYM6_9EUKA4.360e-10249.09Cleavage and polyadenylation specificity factor su... [more]
A0A7S0N1Z8_9CHLO5.750e-10247.81Cleavage and polyadenylation specificity factor su... [more]
UPI00155AE16F5.190e-9944.65probable cleavage and polyadenylation specificity ... [more]
A0A7S0WC87_9CHLO8.410e-9947.59Cleavage and polyadenylation specificity factor su... [more]
A0A7R9T8A6_MICPS9.100e-9945.81Cleavage and polyadenylation specificity factor su... [more]
M2XHI7_GALSU1.510e-9847.04Cleavage and polyadenylation specificity factor su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 602..629
IPR022712Beta-Casp domainSMARTSM01027Beta_Casp_2coord: 388..512
e-value: 1.7E-25
score: 100.7
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 388..512
e-value: 1.5E-17
score: 63.9
IPR025069Cleavage and polyadenylation specificity factor 2, C-terminalPFAMPF13299CPSF100_Ccoord: 986..1039
e-value: 4.1E-6
score: 27.1
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 141..400
e-value: 7.5E-65
score: 220.5
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 142..861
IPR001279Metallo-beta-lactamasePFAMPF16661Lactamase_B_6coord: 152..324
e-value: 3.0E-55
score: 186.7
IPR027075Cleavage and polyadenylation specificity factor subunit 2PANTHERPTHR45922FAMILY NOT NAMEDcoord: 131..1042

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig126contigEcto-sp13_S_contig126:24821..36887 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig126.2150.1mRNA_Ecto-sp13_S_contig126.2150.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig126 24464..37591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig126.2150.1 ID=prot_Ecto-sp13_S_contig126.2150.1|Name=mRNA_Ecto-sp13_S_contig126.2150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1043bp
MAQPLDAARLAHDLSKRIMKHPGATAAAAVPGKAPLKLLQWALSQLEECA
RTRSVPASNVVEVAMAAIKDEVGVPPGEQQPPAAGVAAHPASAPRTSGGA
VDRSSSKGCKGGTTEKKAGGRSGGGRSKGKVVFTPLYGCDEGATGVEPVS
SILEVGGVTILLDCGWDIHFDTTLLEPLREVVKRIDLVLISHPDLEHLGG
LPYAFGKLGMRAKVYATLPVWKMGQMAVYDAYISRTHEGNFQAFDLDDVD
AAFARFKTLKFSQHLTFSGRGAGVTITPYAAGRMIGAAVWRVSWQTEDND
IVYATAYNHDHERHLRASALGTLTRPSVLITDAHNALTGGGMSRKDLNRK
GRQDTTKRKREEELITTVMDTVRGGGNVLLPTDTAGRVLELLVLLNDHWQ
KHRLGSYKLVLLHNTAFNTCEFAKSQLEWMSEDIGRAFDLQRSNPFELRN
VHIMHSLEELDELGDDPKVVMATDMSLDFGFSKALLLRWASGGANTILLT
GRGHGNTTARTLIAKMEYRKSEAGRRAAATDAAAAAGRGARVGYSGAVGA
GFGGGGGGSGGNGQGDDGEEEEEEEEEEEASMMVPVTVPVRVPLTGEELK
AFRDEENRKRRLEQEEEEQRRHAAAMEKEQVIADSDEGSDKDDDETDPAP
KRRRAIVASLFSKYSKPQHLMFGYYDPQVPTDEYGVKETEPIGWLAAAMQ
QQNSEMPAAMQEAGAALQEARAGKKRQLQDDSNTGRSSTGDEETEDGGGG
AGGGDDGEASPGDDQDEQQREPVVDALRASAGEGKESAFFQDSGAVPTKL
EQEVQELEVLCRVVYVDSEGLSDGTSVKNTAVNLAPKMLIVTGGSRRAKA
ELVSHVRQAVEPVVAGRRGRGGGRGGGGGRDSGGSDDDGEGEEEDIACRF
VVVNKAMEPVPVALDSGAFDVLLHDSLHTHLKWKQLNNYGVAHVECRVDP
RGDVPLLCAKPRVERVGHPAMFLSVGKVNVTPQILQAFKKAKVSFEFVAG
KVLLEGGVTVSQGKGGKIELEGPLCDSYFRVRDIIYGEYIVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR025069Cpsf2_C
IPR036866RibonucZ/Hydroxyglut_hydro
IPR001279Metallo-B-lactamas
IPR027075CPSF2