mRNA_Ecto-sp13_S_contig126.2149.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig126.2149.1
Unique NamemRNA_Ecto-sp13_S_contig126.2149.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 649 bits (1675), Expect = 7.020e-229
Identity = 342/358 (95.53%), Postives = 351/358 (98.04%), Query Frame = 1
Query:  478 MTTLVESRGQRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGAKTNVEVSTI 1551
            MTTLVESRGQRV+KFCIKNVLPLGFFV LVIALAWPAPGKAVAKPKV DYR+VQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAG+DASIDPVGLLVKLII+VLVPLVVGKVIRE VPGAKA VKRFKVRLSLTSSAMLIMVVWQTLSRAQD+LTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLG+VGQEGLMTIPCI+GH+SQLF+DAYIASRWANDDVAAVEDEA GAKTN  VSTI
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWANDDVAAVEDEAEGAKTNGVVSTI 358          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 467 bits (1201), Expect = 4.310e-158
Identity = 257/296 (86.82%), Postives = 260/296 (87.84%), Query Frame = 1
Query:  478 MTTLVESRGQRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN-----------------------------------AGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLV 1260
            MTTLVESRGQRV+KFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN                                   AGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLII+VLVPLVVGKVIRE VPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQD+LTSVAFTQILSVIASGIGLHLV
Sbjct:    1 MTTLVESRGQRVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 4.990e-102
Identity = 173/317 (54.57%), Postives = 228/317 (71.92%), Query Frame = 1
Query:  544 LGFFVALVIALAWPAPGKAVAKPKVDDYR-IVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDD----ASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRW 1479
            +G   A++I L+WP  G+ V  P   +Y     T  VI IFIISGLTLKTDDI+ A+SK+GR G IYG++AILGIT  +GF+   +P    EF+YGL+VFC VPTTL+SGV++V  AGGN ALALLLTV TNL  VVT PF++  +  +       A+IDPV LL KLI+TVLVPLV GK++R++VPG K +V R KV+L + ++ ML ++VW T+S A +DL S  F  I  VIA GI +H++YLS+N+P+ K+ LKL   EFKAV +M+SQKTLP+SVT+I +L  +G  G MT+PCI+GH+SQLFIDA + S W
Sbjct:    1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMW 317          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 302 bits (774), Expect = 3.680e-93
Identity = 158/323 (48.92%), Postives = 228/323 (70.59%), Query Frame = 1
Query:  556 VALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGA 1524
            +AL+I LAWP PG  V+   V DYR+VQT+NV+ +F+ISGL LK+ DI+ A+S+EG  G+I G+V ILG+T   GFVA  +PF   EF+YGL++FC VPTT++ GV +   AGGN ALAL+LTV +NLLGV+  PF+++   + G D +ID + LLV L+ITVL PL+VG+ IR +VP  +  V R K  L L SS  L ++VWQT+SR+ +D+ +V+   I+++IA+ + +H+ YL +++   +Y+L+L   E KAVV+MSS+KTLPV++ VI FL +VG EGL++IP I+    QLF+D++IA++W     AA    A  A
Sbjct:    1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFFS-GQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKWGEKTSAAARHAATAA 322          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 295 bits (755), Expect = 8.320e-90
Identity = 159/355 (44.79%), Postives = 234/355 (65.92%), Query Frame = 1
Query:  505 QRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNA---GDDASIDP------VGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGAKTNV 1536
            +R + + IKN L LGF   +V+AL+WP PG+ +  PK  D+ I QT  ++VIF ISGLTLKT DIK+AL +       YG++ IL +T  +GFV  +IPF+  EF YGL++F  VPTTL+SGVTLV +A GN  +AL+LTVTTN+LGV TVPF +  V+ +   GD    D         LL+KLII++++P+ VGK  RE V  A ++  ++K  L LT+++ LI +VW ++S ++  L   +   I  ++ +G+ LHL +L++N+ +   ++K+   E +AV+LM+SQKTLPV+VT+I +L +   G +GL+ IPCI+GH+SQLFIDAYIAS WA  D   +++     +  V
Sbjct:   17 KRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPAA--LAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWAGQDPKEIDERNAAKRAGV 369          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 290 bits (741), Expect = 9.110e-88
Identity = 154/353 (43.63%), Postives = 235/353 (66.57%), Query Frame = 1
Query:  505 QRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGD----------DASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GQEGLMTIPCIIGHISQLFIDAYIASRWA-NDDVAAVEDEAGGA 1524
            +R + + ++N L LGF   + + L+WP PG  +  P   D+ I QT  ++ IF ISGLTLKT DIK AL++    G +YG++ ILG+T  +GF+  +IPF+  +F YGL++FC VPTTL+SGVTLV +A GN ALAL+LTVTTN+LGV TVPF +  V+++              +   + LL+KL+I++++P+ +GK +RE    A+     +KV L L +++ LI +VW ++S++++ L       I  ++ +GI LH+++L++N+ +   +L+L+ +E +AV+LM+S KTLPV+VTVI +L +   G  GL+ IPCI+GH+SQLFIDA IA+RWA N   A    EAGG+
Sbjct:    3 RRWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWAANPPPADAAAEAGGS 353          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A4RT86_OSTLU (BASS family transporter: sodium ion/bile acid (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RT86_OSTLU)

HSP 1 Score: 274 bits (701), Expect = 7.860e-83
Identity = 156/328 (47.56%), Postives = 221/328 (67.38%), Query Frame = 1
Query:  520 FCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAG------------DDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGD--VGQEGLMTIPCIIGHISQLFIDA 1461
            F + N L  GF +AL+  L+ PA GKA+AK  V  + ++QT+ V++IF+ISG TLKT++I +AL K GR    YG VAILG+T  +GF+   +P+   EF YGL++FC VPTTL+SGVTLV NA GN ALAL+LTV+TNL+GV TVPFY   VV +G            +D S   V LLVKL+ T+L+P+V+GKV RE++P   A+    K  L+LT+++ LI+VVW ++S++  +L       I +V+ + + +H+V+L+INY    + L L   E  A V+MSSQKTLPV++T+I +L +   G  GL+ IPCI+ HI+QLF+DA
Sbjct:    1 FLLDNFLVCGFCLALLFGLSVPAAGKALAKVSVSGWSVIQTVCVVIIFVISGATLKTEEITQAL-KAGRGALGYGWVAILGLTPLLGFILVRVPYKPIEFRYGLALFCCVPTTLTSGVTLVRNAKGNVALALMLTVSTNLIGVFTVPFYFNAVVASGPREMASAVNGAANDMSTQAVKLLVKLLFTILLPIVLGKVAREMIPAVAAFANARKAELTLTNNSCLIIVVWMSISKSAKELIDTNVGTIFAVLFAAVLVHVVFLAINYA-ATHALGLSGPERVACVMMSSQKTLPVAMTIISYLPEDVFGSGGLIAIPCIVCHITQLFMDA 326          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO)

HSP 1 Score: 275 bits (703), Expect = 1.730e-82
Identity = 165/348 (47.41%), Postives = 222/348 (63.79%), Query Frame = 1
Query:  508 RVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGD----------DASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGD--VGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEA 1515
            R +KF + N L LGF +AL I L+ PA G  +A      + IVQTI VI+IFIISG TLKT++I +AL + GR    YG+V+ILG+T  +GF+   IP+   +F YGL++FC VPTTL+SGVTLV NA GN ALAL+LTV+TNLLGV TVPFY   +  +G           D     V LLVKL+ T+LVP+  GK+ RE++P       + K  L+LT+++ LI+VVW ++S++   L S     I  VI +GI  H+V+L+INY      L +   E  A V+MSSQKTLPV++TVI +L +   G  GL+ IPCII H++QLF+DA +A+R A    AA    A
Sbjct:   24 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSISKSAKQLLSTDAGSIFLVIFAGIATHVVFLAINYG-ATGALGISGPERVASVMMSSQKTLPVAMTVISYLDEDVFGTSGLIAIPCIICHLTQLFMDAPLATRLAKRFAAAAAXAA 369          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A383W7R8_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7R8_TETOB)

HSP 1 Score: 276 bits (706), Expect = 1.910e-82
Identity = 157/326 (48.16%), Postives = 219/326 (67.18%), Query Frame = 1
Query:  514 RKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRW-GYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGD--DASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLG-DVGQEGLMTIPCIIGHISQLFIDAYIASRW 1479
            ++F + N + L F +A  +A+AWP PGKAVA   V D R+VQ +N  ++F+ISGLTLK+DD +  L     W G +YG++AIL IT  +GF    IPF   EF+ GL++FCVVPTTL  GV L   + GN ALALLLTV TNLLG+VTVP+ ++ V++ G     S++P  L+VKLI+TVLVP V+GK+ R++    + +V RFK  LSL S+  L  +VWQTLS A+  L    F  +L V+ +   LH+V L  N  + +Y+L+L  RE  AVV+MSSQK+ PV+VTVI +L   + Q+GLM IPCI+G ++Q+FI + +A +W
Sbjct:   80 KQFALDNFMLLSFSLAAALAMAWPVPGKAVASWAVGDVRVVQALNNFLVFLISGLTLKSDDFRALLK---HWVGVLYGLIAILAITPCLGFAMLAIPFQPPEFATGLALFCVVPTTLGVGVALTAASKGNQALALLLTVATNLLGIVTVPYELRLVLSTGSVSTVSVEPGSLVVKLILTVLVPSVIGKLARDLFKPVQRFVTRFKTPLSLFSTLNLACIVWQTLSGARQTLLQQPFVAVLLVVVASSLLHVVMLLFNGLVVRYLLRLPFREAVAVVIMSSQKSAPVAVTVISYLTPSLTQQGLMAIPCILGQLAQIFIGSALA-KW 401          
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A5B8MCM7_9CHLO (Putative sodium/metabolite cotransporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCM7_9CHLO)

HSP 1 Score: 271 bits (694), Expect = 2.630e-80
Identity = 150/330 (45.45%), Postives = 218/330 (66.06%), Query Frame = 1
Query:  508 RVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVD----DYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GQEGLMTIPCIIGHISQLFIDAYIASRW 1479
            +V  F  KN LPLG   A  +A+ +P PG+ V K  V+    DY++V +  + +IF+ SG TLKTDDI +A       GY  G VAIL IT  +GF   ++PF    F+ GLSVFC VPTTLSSGV LV   GGN ALALLLTV TNLLG++TVPF VK V+++ +D   D + LL+KL IT+L PL++GK++R        + K  K + S+ +S  L+++VWQTLS+AQ ++   +   +L ++A GIG+H+ +L  N+ I   +L++++ E++A++L +SQKTLP++VTVI FL +   G  GL+ +PC++ H+ Q+ ID+ I SRW
Sbjct:    4 KVWPFLKKNFLPLGLVTAATVAMVYPPPGREVQKHMVEVNGNDYKLVSSCLIFLIFLSSGFTLKTDDIMKAAKNYVAVGY--GFVAILLITPTLGFGIMKLPFKPKAFASGLSVFCAVPTTLSSGVALVTQGGGNAALALLLTVGTNLLGILTVPFAVKLVLDSEEDFDFDALSLLIKLAITILAPLILGKLLRHSHQALGKFAKEKKQKFSMANSLCLVLIVWQTLSKAQPEVIDQSAGDLLLLVAGGIGIHIAFLVFNF-ISVSLLRVEQPEYRALLLCTSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSRW 330          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA3_ECTSI7.020e-22995.53Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ecto... [more]
A0A6H5KQQ7_9PHAE4.310e-15886.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CLX8_9STRA4.990e-10254.57Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A836CJ89_9STRA3.680e-9348.92Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
C1E9H5_MICCC8.320e-9044.79Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A7S0SJ85_9CHLO9.110e-8843.63Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A4RT86_OSTLU7.860e-8347.56BASS family transporter: sodium ion/bile acid (Fra... [more]
A0A7S0Z714_9CHLO1.730e-8247.41Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A383W7R8_TETOB1.910e-8248.16Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A5B8MCM7_9CHLO2.630e-8045.45Putative sodium/metabolite cotransporter n=1 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig126contigEcto-sp13_S_contig126:19856..24357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score646.4
Seed ortholog evalue8.1e-183
Seed eggNOG ortholog2880.D7FQA3
Model size2092
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal peptide
Exons4
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
Ec32 ortholog descriptionPutative sodium bile acid cotransporter
Ec32 orthologEc-01_006880.1
Cds size1077
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig126.2149.1prot_Ecto-sp13_S_contig126.2149.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig126 20394..23880 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462672.3050292-UTR-Ecto-sp13_S_contig126:19855..203931681462672.3050292-UTR-Ecto-sp13_S_contig126:19855..20393Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig126 19856..20393 -
1681462672.3557935-UTR-Ecto-sp13_S_contig126:23880..243571681462672.3557935-UTR-Ecto-sp13_S_contig126:23880..24357Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig126 23881..24357 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462672.3158145-CDS-Ecto-sp13_S_contig126:20393..206881681462672.3158145-CDS-Ecto-sp13_S_contig126:20393..20688Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig126 20394..20688 -
1681462672.3261263-CDS-Ecto-sp13_S_contig126:20925..211521681462672.3261263-CDS-Ecto-sp13_S_contig126:20925..21152Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig126 20926..21152 -
1681462672.336127-CDS-Ecto-sp13_S_contig126:21570..217141681462672.336127-CDS-Ecto-sp13_S_contig126:21570..21714Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig126 21571..21714 -
1681462672.3475473-CDS-Ecto-sp13_S_contig126:23469..238801681462672.3475473-CDS-Ecto-sp13_S_contig126:23469..23880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig126 23470..23880 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig126.2149.1

>prot_Ecto-sp13_S_contig126.2149.1 ID=prot_Ecto-sp13_S_contig126.2149.1|Name=mRNA_Ecto-sp13_S_contig126.2149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
MTTLVESRGQRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDY
RIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAV
GFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTV
TTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIR
EVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILS
VIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVI
GFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGAK
TNVEVSTI*
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mRNA from alignment at Ecto-sp13_S_contig126:19856..24357-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig126.2149.1 ID=mRNA_Ecto-sp13_S_contig126.2149.1|Name=mRNA_Ecto-sp13_S_contig126.2149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4502bp|location=Sequence derived from alignment at Ecto-sp13_S_contig126:19856..24357- (Ectocarpus species13 EcNAP12_S_4_19m)
CGAAGGTCGCTGCAGCACTCACCAAGCAACACGCACCAGGTGTGTGCCCT AGAGAACCCAAAGCATTCTCTGTGATTCCGCCGGTTGTGAACGGCGTTGA GGGCAAAATTCAGCCTCTGACGGTGCGGTGTTTGAACAAGGGTTACTGGA AACCTGTGACGCGACGCACGTCATTCCAACCTCTCGGGGGCTGGTGGGGC TGCCGGCTGGTGTACTGCCCAACTACGGTGTGGTTGGGTGAATCAGGGCG TGGCAAGGTTCTCCTGGAATAGGAGCTTGCTCTCGGAGAACGCTTAGCAG GCCCGCATCACAACATCACCCCCGAAGACGCAGGAAGGTGGCCCAAGGAA GACAAGTTTGGGGGTGATTTTCAAGACTTCCCTCGCGACAAGAGAGCCAG CAGGGAGGATACAACCGCCAGAGAGTTGAGAGTGACCAACCAACAAGCCA ACACAAGGTTATCCTGCCCATCGCATCATGACAACGCTAGTGGAGTCACG GGGACAGCGAGTGCGGAAGTTCTGCATAAAAAATGTTCTACCGCTGGGCT TCTTCGTTGCCCTGGTGATCGCCCTCGCTTGGCCGGCGCCCGGGAAGGCG GTGGCGAAGCCGAAGGTTGACGACTACCGCATCGTGCAAACCATCAACGT CATTGTCATCTTCATCATCTCCGGCCTGACACTGAAGACCGACGATATCA AGGAAGCCTTGAGCAAGGAGGGGAGATGGGGTTACATTTACGGGGTCGTG GCCATCTTGGGGATCACGGGCGCCGTGGGGTTCGTTGCTGCGGAGATTCC CTTCGACGTGGATGAGTTTTCCTACGGCTTGTCGGTGTTTTGCGTGGTGC CCACGACGCTGTCGTCTGGGGTGACCCTGGTCATGAATGTGAGTTAGGAG TGGTGGTGATGCTCTTTGTACATCACAGGGTATCGGACTGTTTTCCGTTT TTCCTGGATATGGTCGTGGTGTGTTGTCATGTCCATGTATATCTACCGTA CATAGTAGACTGTTGGACTAACGCGCTCTGAAGACGAGTTAGATACTGCT GTGTTGTTCTTAGATTTCAGGCGCCACCGAATGTGCTGCATCCCCGTGGT TGCGGGAAACAATTGATAAAAGGGAAATGGACAAAGGTGGGTGTACCCAC GCCATTCTCGGACAAAGGTGTGTACTCGAAAATCCAGCGCGGGCGCCCTC CATTGCTCCAGTGGCGACCTCCAAACTACTCAAAACCCCATTCTGACACC TGGGCGACACAGCCAGGGACCATTCACAGCACGGGCATCGATTTTTCCCA CTTTCAGGTATACCTTTGGCCATAATACCGCCGAGGCGCGCAAGGCTTCA CCAGAGTGCCCACCTCTGTCCGACATTGCGGTGGGTATACCCAGCGGCGT CTACTATTCATGTACCCACTTGTGTCTATATTTATTGACCCACTTTCGTC CAAATGGTACCCACTTTTGTCCACTTGAGAAAGGCGGAAATCGAGCAGAA ATCGACCACCACGTCAACGCAAGGCAGAACATCGAATAGCCTCAGAACGT ATCACAACCTCACAACGCCGTATCCATGGCATGTTTCCTATCCATGGCTG CCGACTGCGGACCGACCGCGGAACATGCCAGAAACATGCCAGACCCCTTC GGTACCGGCACGGAAGATACCGGGTAAGGGAAGATACCCGCGGCAAGCGC GGCAAGCAGCGCACTAACGGCTCGCCACAAATAAATGTGTGACACGCAAC GGACAACAAAACCAACGGACGCGCATACAGAACAAAAAGACAACAAGACG CACACGCGCGCCGCACACCCACAAAAACATCAACCGACACTACGAGTGCA CACCGACTCGTGAGGGCAGCAGCTGCATGTCGAGGCAGTTTACCATGCAA CTAGGTGATGTTAAGAGGGTATTCATATGCACTACATGTATGTATATACG AGGTGAAAATCCGACCCGATATCCCGCGGTCGGTCCGCAGTCGGCAGCCA TGGATAGGAAACATGCCATGGATACGGCGTTGGGAGGTTCTGAGACGTTC CGAGGCTATTCGATGTTCTGCCTTGCGGTGACGCGGAAGTCGATTTCCGC TCGATTTCCGCCGCTCTCAAGTGGACAAAAGTGGGTACTATTTGGACGAA AGTGGGTAAAAATATAGATACAAGTGGGTGCATGGAAATATTAGTAGACG CCGCTGGGTATACCCACCGCGATGTCGGACAGAAGTGGGCACTCTGGTGA GGCCTTGCGCGCCTCGGCGGTATTATGGCCAAAGGTGTACCTGAAAGTGG GAAAAATCGATGCCCGTGCTGTGTATGGTCCCTGGCTGTGTCGCCGAGGT GACAGGATGGGGTTTTGAGTCGTTTGGAGGTCGCCACTGGAGCAATGGAG GGCGCCCGCGCTGGATTTTCGAGTACCCACCTTTGTCCGAGAATGGCGTG GGTACACCCACCTTTGTCCATTTCCCACATAGATGAATAGTTAAAAAAAA AAAGCCTGGTGGTGAAAGTCGTCCGGGCCGCGCCGCACCATCACATGCTA CGAAGTTCGGAGTGGTTCAGCCTCCAAGGCGTTCCCGATGTTTCGTTGCT TTTTTTCACGTCGTACGCCCCCCCATTCACCTTATCGCCACAGGCTGGAG GAAACGATGCCCTGGCCCTCCTCCTCACCGTAACAACCAACTTGCTCGGA GTTGTGACGGTTCCGTTTTACGTCAAGGGTGTGGTCAACGCCGGCGACGA TGCGTCCATTGACCCGGTGGGCCTTCTCGTCAAGCTGGTGAGCTCGGACA CGTGTGTGCTGTTGCAATGGCAACTGGACGAATAGCGCAGCAATGGTGTA CCTGCTCAAAAACCGGATGTGAGAAACCGCTTCATTATGCCGCTCTCGTC AGTGAGATACTTTTGGGGTGCAACGAGTATCAGGACGTGACGCCTAAAAG ATCTACAGCGCTTTCTCGTTTAGCGCTACCCTCTGTCCACATACCATCCC CACCTTGGACCCTCTTTGTCCGTGGATTGGTTGAACTGAGAGAGAGAATC GGGGCGTAGGACCCTTATCAAACTGGATTTGAACCTGATCAAAAAACAAA CACACCCACCCTTTCCGTTTGTCGTTCCTTTTCGGCGTCTCGCCTTGTGT TATCTGAATCTCTTGCCTATTTCCATCCTGCCGTTGCCTGTGTTTTTGTG ATCAGATTATCACTGTTCTGGTTCCGCTGGTGGTGGGAAAGGTCATAAGA GAGGTAGTACCGGGGGCGAAGGCGTGGGTGAAGCGGTTCAAGGTGCGGCT GAGCCTGACGAGCAGCGCGATGCTCATCATGGTGGTCTGGCAAACTTTGA GCAGGGCGCAAGACGACTTGACGTCGGTGGCGTTCACGCAAATCTTGTCT GTGATTGCCTCGGGCATCGGCCTGCATTTAGTGTGAGTGTTTGGGTGGAC AAGTTCGATAGCGAAACGTGCTCGGCGGGAGGATGGGCGAAGACATTGAC TCATAAATACAAAAAATAGTGGTATTTTGTCGAGTTGGGCAAGGCCAATC AATTGTGCACGTACGGTGCACAATTCCTCTTTTTTTTCACGAACATCAGG TTGGTTTTCCGTTTGTCGTGCTCTCTCACCTTTCTCGTTTGCCCGCCCAT ACGTCCCATTCCCAATCAGCTACCTGAGCATCAACTACCCGATCTGCAAG TACATCCTCAAGCTCAAGCGGCGAGAATTCAAGGCCGTGGTGCTCATGAG CTCGCAAAAGACGCTGCCGGTATCGGTTACTGTGATCGGCTTTCTCGGGG ATGTAGGGCAAGAGGGGCTCATGACGATACCATGCATCATCGGTCACATA TCGCAGCTCTTCATCGACGCTTACATAGCCTCCAGATGGGCCAACGACGA TGTCGCCGCAGTAGAGGACGAAGCAGGGGGCGCGAAGACGAATGTGGAAG TTTCGACAATTTAGTTCCTCTTTTCACATCGGGAGGGAGGATTGAGTTGT GGGCGTCTTGCTTAGGGTCCTCTTGTGCAGCGTTTTTCTCTCTTTTTTCC GCGCAACTCACTGTGCTTGGTGTTGTTTAGCAACACGTCCCCCTCCCTAC CCTTGAGGGTTATCGAGGTTCGGTTGAGGTGAATGGCGCCCCCAATACTC ACAGGCGTGCGCCGTTTGTATGGTTGTGGTGTTGTGTTGCAGATGAGTGA GCTGGAGAGATTTCTTCAGCTCGCCTGTTACCATGTCAATAGCGCAATTA TAATAGCCGCTCATGATGCTTTGGTGGCTTGGATGTATGTAGAATGCTAT TTAATACTTCGGAATAGTAACGGACATAGTGTCCGGCGAACCGCATGTGA TACGAGGCAACAGAGTTGCAGGGAAGAACGGAGTACTTTTGTCAGTGTTG TTGGGCATCAAGCGATGTGTTTCGGGAGTTGGAGCAGGTATTCCAGGTCT TGTTGCCGTGCTCAACGGCTACGGCAATTCATGATGCATTGATCAAACGC GG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig126:19856..24357-

>mRNA_Ecto-sp13_S_contig126.2149.1 ID=mRNA_Ecto-sp13_S_contig126.2149.1|Name=mRNA_Ecto-sp13_S_contig126.2149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig126:19856..24357- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACAACGCTAGTGGAGTCACGGGGACAGCGAGTGCGGAAGTTCTGCAT
AAAAAATGTTCTACCGCTGGGCTTCTTCGTTGCCCTGGTGATCGCCCTCG
CTTGGCCGGCGCCCGGGAAGGCGGTGGCGAAGCCGAAGGTTGACGACTAC
CGCATCGTGCAAACCATCAACGTCATTGTCATCTTCATCATCTCCGGCCT
GACACTGAAGACCGACGATATCAAGGAAGCCTTGAGCAAGGAGGGGAGAT
GGGGTTACATTTACGGGGTCGTGGCCATCTTGGGGATCACGGGCGCCGTG
GGGTTCGTTGCTGCGGAGATTCCCTTCGACGTGGATGAGTTTTCCTACGG
CTTGTCGGTGTTTTGCGTGGTGCCCACGACGCTGTCGTCTGGGGTGACCC
TGGTCATGAATGCTGGAGGAAACGATGCCCTGGCCCTCCTCCTCACCGTA
ACAACCAACTTGCTCGGAGTTGTGACGGTTCCGTTTTACGTCAAGGGTGT
GGTCAACGCCGGCGACGATGCGTCCATTGACCCGGTGGGCCTTCTCGTCA
AGCTGATTATCACTGTTCTGGTTCCGCTGGTGGTGGGAAAGGTCATAAGA
GAGGTAGTACCGGGGGCGAAGGCGTGGGTGAAGCGGTTCAAGGTGCGGCT
GAGCCTGACGAGCAGCGCGATGCTCATCATGGTGGTCTGGCAAACTTTGA
GCAGGGCGCAAGACGACTTGACGTCGGTGGCGTTCACGCAAATCTTGTCT
GTGATTGCCTCGGGCATCGGCCTGCATTTAGTCTACCTGAGCATCAACTA
CCCGATCTGCAAGTACATCCTCAAGCTCAAGCGGCGAGAATTCAAGGCCG
TGGTGCTCATGAGCTCGCAAAAGACGCTGCCGGTATCGGTTACTGTGATC
GGCTTTCTCGGGGATGTAGGGCAAGAGGGGCTCATGACGATACCATGCAT
CATCGGTCACATATCGCAGCTCTTCATCGACGCTTACATAGCCTCCAGAT
GGGCCAACGACGATGTCGCCGCAGTAGAGGACGAAGCAGGGGGCGCGAAG
ACGAATGTGGAAGTTTCGACAATTTAG
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