mRNA_Ecto-sp13_S_contig9856.21499.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: A0A6H5KTR2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR2_9PHAE) HSP 1 Score: 783 bits (2023), Expect = 1.690e-275 Identity = 433/480 (90.21%), Postives = 437/480 (91.04%), Query Frame = 1
Query: 19 LDAMRVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQVYRSAEHFLEVLKSLSSSLTDMPLPSYDPSGGDDHPFDVSQTLKDVSRERFDVNKVPTDPSQCWSQIQTLLLQAAVQDQKXXXXXXXXXXXXXXXVKPDRVARPPDAAAVQPDTGGARIATDTAAASATSTGAAAESVKPWGVKDEEDVRPSRSVPADQEVDHTPSGPDGTHCCDASPSGVRVPGEGVCSAGPVQGGVGGAAKVGDGAVAGKSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTTCEASPRPLMTITTTMKEIIQFAPFVEQLALVRRKSGLIAEGNGADIPAEPSNRQQQPSHARSGR 1458
LDAMRVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQVYRSAEHFLEVLKSLSSSLTDMPLPSYDPSGGDDHPFDVSQTLKDVSRERFDVNKVPTDPS+CWSQIQTLLLQAAVQDQ XXXXXXXXXXXX P RVARPPDAAAVQPDTGGARI DTAAASAT +VKP GVKDE DVRP RSVPADQEVDHT GP GTHCCDASPSGVRVPGEG GPV GDGAVA KSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTTCEASPRPLMTITTTMKEIIQFAPFVE LVRRKSGLIA+GNG+ IPAEPS RQQQPS ARSGR
Sbjct: 357 LDAMRVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQVYRSAEHFLEVLKSLSSSLTDMPLPSYDPSGGDDHPFDVSQTLKDVSRERFDVNKVPTDPSRCWSQIQTLLLQAAVQDQXXXXXXXXXXXXX---ATPGRVARPPDAAAVQPDTGGARIVIDTAAASATGXXXXXXTVKPKGVKDEVDVRPPRSVPADQEVDHTSRGPGGTHCCDASPSGVRVPGEGGFGGGPVXXXXXXXXXDGDGAVAAKSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTTCEASPRPLMTITTTMKEIIQFAPFVEHPVLVRRKSGLIAQGNGSVIPAEPSKRQQQPSQARSGR 833
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: D7FY37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY37_ECTSI) HSP 1 Score: 545 bits (1403), Expect = 9.460e-186 Identity = 309/430 (71.86%), Postives = 313/430 (72.79%), Query Frame = 1
Query: 172 VREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQVYRSAEHFLEVLKSLSSSLTDMPLPSYDPSGGDDHPFDVSQTLKDVSRERFDVNKVPTDPSQCWSQIQTLLLQAAVQDQKXXXXXXXXXXXXXXXVKPDRVARPPDAAAVQPDTGGARIATDTAAASATSTGAAAESVKPWGVKDEEDVRPSRSVPADQEVDHTPSGPDG-THCCDASPSGVRVPGEGVCSAGPVQGGVGGAAKVGDGAVAGKSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTTCEASPRPLMTITTTMKEIIQFAPFVEQLALVRRKSGLIAEGNGADIPAEPSNRQQQPSHARSGR 1458
VREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQVYRSAEHFLEVLKSLSSSLTDMPLPSYDPSGGDDHPFDVSQ SV+P VKD+EDVR SRSVP DQ VDHT GPDG T C ASPSGVRVPGEG GPVQGGVGG AK GDGAVA KSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTT EASPRPLMTIT+TMKEIIQFAPFVE LVRRKSGLIAEGNG+DIPAEPSNRQQQPSHARSGR
Sbjct: 316 VREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQVYRSAEHFLEVLKSLSSSLTDMPLPSYDPSGGDDHPFDVSQ-----------------------------------------------------------------------------------------------SVRPKRVKDKEDVRASRSVPVDQAVDHTSRGPDGCTRCPAASPSGVRVPGEGGRGGGPVQGGVGGTAKDGDGAVAAKSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTTSEASPRPLMTITSTMKEIIQFAPFVEHPVLVRRKSGLIAEGNGSDIPAEPSNRQQQPSHARSGR 650
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: A0A835YH88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH88_9STRA) HSP 1 Score: 292 bits (748), Expect = 4.260e-85 Identity = 204/473 (43.13%), Postives = 258/473 (54.55%), Query Frame = 1
Query: 19 LDAMRVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVREVCRQIVTDYEARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRSIDEGLRSSLKNQV--------------------------YRSAEHFLEVLKSLSSSLTDMPLP--SYDPSGGDDHPFDVSQTLKDVSRERFDVNKVPTDPSQCWSQIQTLLLQAAVQDQKXXXXXXXXXXXXXXXVKPDRVARPPDAAAVQPDTGGARIATDTAAASATSTGAAAESVKPWGVKDEED----VRPSRSVPADQEVDHTP-SGPDGTHCCDASPSGVRVPGEGVCSAGPVQGGVGGAAKVGDGAVAGKSALETYVDQCAWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIRTKGLAVRVTTVDKHDIYHISDVDMTTCEASPRPLMTITTTMKEIIQFAPF 1338
+D +R E ++R + A A E LPLQRPAR LLPPLLFCMAC++L VRLL PEVR V +IV DYEARA++WM+PAQNA FL+PLV+EFASWLR N +ILY SATE LLR +D LR LKNQ Y+SAEHFL V +SL LTD+ LP + D DD FDV QT+KD++RERF VN P+QC +++++ AA+ D ++R P + P+ G + S A+ P G + D V + +D E D + S P+ TH A+ VPG + A+ G V G A YV +C WR LHAASRTASGGDSFF+VQDLFGGEGVL+K PIR+ GL + VTT + +DIYH SDV + P PLMT+ TT+KE+I F PF
Sbjct: 336 VDPLRCEGLLRAWTACAGEYLPLQRPARALLPPLLFCMACDILGVRLLGPEVRTVVDKIVADYEARARVWMAPAQNAATFLRPLVLEFASWLRQNAEILYHASATEALLRCVDRDLRFRLKNQXXXXXXXXXXXXXXXXXXXXXXXXXXXYQSAEHFLLVFQSLRPLLTDIELPVNALDDEE-DDSEFDVGQTMKDINRERFVVNGDDMSPAQCVEALRSIVT-AALTDAAGGPAAPRNPPSLAVTTP---LSRAPPGMSTVPEGGDGSMHVPAELDSPRRRPAS-----PRGPRRPSDRGMHVVQLCQIASDSECDSSSESEPESTHRARAT----SVPGSPLIGTNAANSSSISTAQTGGFNVEGL-AERAYVGRCVWRALHAASRTASGGDSFFIVQDLFGGEGVLIKATRIAPPPIRLAASGLTLTVTTTNAYDIYHFSDVAEGD-DGPPCPLMTVCTTLKEVIAFLPF 792
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: A0A1Z5JA10_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JA10_FISSO) HSP 1 Score: 60.8 bits (146), Expect = 3.890e-6 Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 31 RVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVREVCRQIVTDYE-----ARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRS-IDEGLRSSLKNQVYRSAEHFLEVLKSLSSSL 444
R ++V + + + R +L LL CM E+L V +L+ ++ V R+IV++YE A SP AE L PL++++ +LR N E +LR+ +D +R + K +RS H LEV +S S L
Sbjct: 249 RANAIVAAFIETVSTV----RQQGPVLTSLLSCMTKEVLAVDILSEDLERVIRRIVSEYEHATSFASLAFLSSPEDAAEHKLTPLILDYLRYLRVNWQNAEASCELEEMLRNCMDPQMRKTFKTVEFRSIGHLLEVCQSFRSEL 388
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: A0A1Z5K489_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K489_FISSO) HSP 1 Score: 60.5 bits (145), Expect = 5.130e-6 Identity = 44/144 (30.56%), Postives = 70/144 (48.61%), Query Frame = 1
Query: 31 RVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVREVCRQIVTDYE-----ARAKLWMSPAQNAERFLQPLVMEFASWLRANRDILYQGSATEGLLRS-IDEGLRSSLKNQVYRSAEHFLEVLKSLSSSL 444
R ++V + + + R +L LL CM E++ V +L+ + V R+IV++YE A SP AER L PL++++ +LR N E +LR+ +D +R + K +RS H LEV +S S L
Sbjct: 245 RANAIVAAFIETVSTV----RQQGPVLTRLLSCMTKEVIAVEILSEGLERVIRRIVSEYEHATSFASLAFLSSPENAAERKLTPLILDYLRYLRVNWQNAEASCELEEMLRNCMDPQMRRTFKTVEFRSIGHLLEVCQSFRSEL 384
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: A0A067BJU8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BJU8_SAPPC) HSP 1 Score: 55.1 bits (131), Expect = 6.580e-5 Identity = 35/106 (33.02%), Postives = 58/106 (54.72%), Query Frame = 1
Query: 1045 DQC---AWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRI-----RTKGLAVRVTTVDKHDIYHISDVD--MTTCEASPRPLMTITTTMKEIIQFA 1332
DQC + R++ SRT SG DS+F +Q+LFG G+L+K T P+ I +T R++ + + IY D++ +T + + PL+ I T + E++ FA
Sbjct: 100 DQCLEASDRIMRRCSRTHSGTDSYFALQELFGTTGLLIKPRPGGTPPLDISLGRDKTGSFKCRISAANLYAIYRHDDIEQLLTHSDHTLAPLVEIDTVIVEVMSFA 205
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Match: T0SI70_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SI70_SAPDV) HSP 1 Score: 55.1 bits (131), Expect = 6.580e-5 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 1
Query: 1045 DQC---AWRVLHAASRTASGGDSFFVVQDLFGGEGVLVKMATAPTEPIRIR-----TKGLAVRVTTVDKHDIYHISDVD--MTTCEASPRPLMTITTTMKEIIQFA 1332
DQC + R++ SRT SG DS+F +Q+LFG G+L+K T P+ IR T R++ + + IY D++ +T E + PL+ I T + E + FA
Sbjct: 100 DQCLEASDRIMRRCSRTHSGTDSYFALQELFGATGLLIKPRPGGTPPLDIRLGRDKTGSYKCRISASNLYGIYRHDDIEQLLTHNEHTLAPLVEIDTVIVEAMSFA 205 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9856.21499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9856.21499.1 >prot_Ecto-sp13_S_contig9856.21499.1 ID=prot_Ecto-sp13_S_contig9856.21499.1|Name=mRNA_Ecto-sp13_S_contig9856.21499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=478bp MRVESVVRGYAANAAEILPLQRPARTLLPPLLFCMACELLHVRLLAPEVRback to top mRNA from alignment at Ecto-sp13_S_contig9856:434..5929- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9856.21499.1 ID=mRNA_Ecto-sp13_S_contig9856.21499.1|Name=mRNA_Ecto-sp13_S_contig9856.21499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5496bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9856:434..5929- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9856:434..5929- >mRNA_Ecto-sp13_S_contig9856.21499.1 ID=mRNA_Ecto-sp13_S_contig9856.21499.1|Name=mRNA_Ecto-sp13_S_contig9856.21499.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1434bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9856:434..5929- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |