mRNA_Ecto-sp13_S_contig126.2149.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI) HSP 1 Score: 649 bits (1675), Expect = 7.020e-229 Identity = 342/358 (95.53%), Postives = 351/358 (98.04%), Query Frame = 1
Query: 478 MTTLVESRGQRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGAKTNVEVSTI 1551
MTTLVESRGQRV+KFCIKNVLPLGFFV LVIALAWPAPGKAVAKPKV DYR+VQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAG+DASIDPVGLLVKLII+VLVPLVVGKVIRE VPGAKA VKRFKVRLSLTSSAMLIMVVWQTLSRAQD+LTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLG+VGQEGLMTIPCI+GH+SQLF+DAYIASRWANDDVAAVEDEA GAKTN VSTI
Sbjct: 1 MTTLVESRGQRVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWANDDVAAVEDEAEGAKTNGVVSTI 358
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE) HSP 1 Score: 467 bits (1201), Expect = 4.310e-158 Identity = 257/296 (86.82%), Postives = 260/296 (87.84%), Query Frame = 1
Query: 478 MTTLVESRGQRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN-----------------------------------AGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLV 1260
MTTLVESRGQRV+KFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMN AGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLII+VLVPLVVGKVIRE VPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQD+LTSVAFTQILSVIASGIGLHLV
Sbjct: 1 MTTLVESRGQRVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA) HSP 1 Score: 326 bits (836), Expect = 4.990e-102 Identity = 173/317 (54.57%), Postives = 228/317 (71.92%), Query Frame = 1
Query: 544 LGFFVALVIALAWPAPGKAVAKPKVDDYR-IVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDD----ASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRW 1479
+G A++I L+WP G+ V P +Y T VI IFIISGLTLKTDDI+ A+SK+GR G IYG++AILGIT +GF+ +P EF+YGL+VFC VPTTL+SGV++V AGGN ALALLLTV TNL VVT PF++ + + A+IDPV LL KLI+TVLVPLV GK++R++VPG K +V R KV+L + ++ ML ++VW T+S A +DL S F I VIA GI +H++YLS+N+P+ K+ LKL EFKAV +M+SQKTLP+SVT+I +L +G G MT+PCI+GH+SQLFIDA + S W
Sbjct: 1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMW 317
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA) HSP 1 Score: 302 bits (774), Expect = 3.680e-93 Identity = 158/323 (48.92%), Postives = 228/323 (70.59%), Query Frame = 1
Query: 556 VALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDVGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGA 1524
+AL+I LAWP PG V+ V DYR+VQT+NV+ +F+ISGL LK+ DI+ A+S+EG G+I G+V ILG+T GFVA +PF EF+YGL++FC VPTT++ GV + AGGN ALAL+LTV +NLLGV+ PF+++ + G D +ID + LLV L+ITVL PL+VG+ IR +VP + V R K L L SS L ++VWQT+SR+ +D+ +V+ I+++IA+ + +H+ YL +++ +Y+L+L E KAVV+MSS+KTLPV++ VI FL +VG EGL++IP I+ QLF+D++IA++W AA A A
Sbjct: 1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFFS-GQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKWGEKTSAAARHAATAA 322
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC) HSP 1 Score: 295 bits (755), Expect = 8.320e-90 Identity = 159/355 (44.79%), Postives = 234/355 (65.92%), Query Frame = 1
Query: 505 QRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNA---GDDASIDP------VGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEAGGAKTNV 1536
+R + + IKN L LGF +V+AL+WP PG+ + PK D+ I QT ++VIF ISGLTLKT DIK+AL + YG++ IL +T +GFV +IPF+ EF YGL++F VPTTL+SGVTLV +A GN +AL+LTVTTN+LGV TVPF + V+ + GD D LL+KLII++++P+ VGK RE V A ++ ++K L LT+++ LI +VW ++S ++ L + I ++ +G+ LHL +L++N+ + ++K+ E +AV+LM+SQKTLPV+VT+I +L + G +GL+ IPCI+GH+SQLFIDAYIAS WA D +++ + V
Sbjct: 17 KRWKPWLIKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPAA--LAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWAGQDPKEIDERNAAKRAGV 369
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO) HSP 1 Score: 290 bits (741), Expect = 9.110e-88 Identity = 154/353 (43.63%), Postives = 235/353 (66.57%), Query Frame = 1
Query: 505 QRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGD----------DASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GQEGLMTIPCIIGHISQLFIDAYIASRWA-NDDVAAVEDEAGGA 1524
+R + + ++N L LGF + + L+WP PG + P D+ I QT ++ IF ISGLTLKT DIK AL++ G +YG++ ILG+T +GF+ +IPF+ +F YGL++FC VPTTL+SGVTLV +A GN ALAL+LTVTTN+LGV TVPF + V+++ + + LL+KL+I++++P+ +GK +RE A+ +KV L L +++ LI +VW ++S++++ L I ++ +GI LH+++L++N+ + +L+L+ +E +AV+LM+S KTLPV+VTVI +L + G GL+ IPCI+GH+SQLFIDA IA+RWA N A EAGG+
Sbjct: 3 RRWKPWLLRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEHV--GLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWAANPPPADAAAEAGGS 353
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A4RT86_OSTLU (BASS family transporter: sodium ion/bile acid (Fragment) n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RT86_OSTLU) HSP 1 Score: 274 bits (701), Expect = 7.860e-83 Identity = 156/328 (47.56%), Postives = 221/328 (67.38%), Query Frame = 1
Query: 520 FCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAG------------DDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGD--VGQEGLMTIPCIIGHISQLFIDA 1461
F + N L GF +AL+ L+ PA GKA+AK V + ++QT+ V++IF+ISG TLKT++I +AL K GR YG VAILG+T +GF+ +P+ EF YGL++FC VPTTL+SGVTLV NA GN ALAL+LTV+TNL+GV TVPFY VV +G +D S V LLVKL+ T+L+P+V+GKV RE++P A+ K L+LT+++ LI+VVW ++S++ +L I +V+ + + +H+V+L+INY + L L E A V+MSSQKTLPV++T+I +L + G GL+ IPCI+ HI+QLF+DA
Sbjct: 1 FLLDNFLVCGFCLALLFGLSVPAAGKALAKVSVSGWSVIQTVCVVIIFVISGATLKTEEITQAL-KAGRGALGYGWVAILGLTPLLGFILVRVPYKPIEFRYGLALFCCVPTTLTSGVTLVRNAKGNVALALMLTVSTNLIGVFTVPFYFNAVVASGPREMASAVNGAANDMSTQAVKLLVKLLFTILLPIVLGKVAREMIPAVAAFANARKAELTLTNNSCLIIVVWMSISKSAKELIDTNVGTIFAVLFAAVLVHVVFLAINYA-ATHALGLSGPERVACVMMSSQKTLPVAMTIISYLPEDVFGSGGLIAIPCIVCHITQLFMDA 326
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO) HSP 1 Score: 275 bits (703), Expect = 1.730e-82 Identity = 165/348 (47.41%), Postives = 222/348 (63.79%), Query Frame = 1
Query: 508 RVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGD----------DASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGD--VGQEGLMTIPCIIGHISQLFIDAYIASRWANDDVAAVEDEA 1515
R +KF + N L LGF +AL I L+ PA G +A + IVQTI VI+IFIISG TLKT++I +AL + GR YG+V+ILG+T +GF+ IP+ +F YGL++FC VPTTL+SGVTLV NA GN ALAL+LTV+TNLLGV TVPFY + +G D V LLVKL+ T+LVP+ GK+ RE++P + K L+LT+++ LI+VVW ++S++ L S I VI +GI H+V+L+INY L + E A V+MSSQKTLPV++TVI +L + G GL+ IPCII H++QLF+DA +A+R A AA A
Sbjct: 24 RAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSISKSAKQLLSTDAGSIFLVIFAGIATHVVFLAINYG-ATGALGISGPERVASVMMSSQKTLPVAMTVISYLDEDVFGTSGLIAIPCIICHLTQLFMDAPLATRLAKRFAAAAAXAA 369
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A383W7R8_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7R8_TETOB) HSP 1 Score: 276 bits (706), Expect = 1.910e-82 Identity = 157/326 (48.16%), Postives = 219/326 (67.18%), Query Frame = 1
Query: 514 RKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRW-GYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGD--DASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLG-DVGQEGLMTIPCIIGHISQLFIDAYIASRW 1479
++F + N + L F +A +A+AWP PGKAVA V D R+VQ +N ++F+ISGLTLK+DD + L W G +YG++AIL IT +GF IPF EF+ GL++FCVVPTTL GV L + GN ALALLLTV TNLLG+VTVP+ ++ V++ G S++P L+VKLI+TVLVP V+GK+ R++ + +V RFK LSL S+ L +VWQTLS A+ L F +L V+ + LH+V L N + +Y+L+L RE AVV+MSSQK+ PV+VTVI +L + Q+GLM IPCI+G ++Q+FI + +A +W
Sbjct: 80 KQFALDNFMLLSFSLAAALAMAWPVPGKAVASWAVGDVRVVQALNNFLVFLISGLTLKSDDFRALLK---HWVGVLYGLIAILAITPCLGFAMLAIPFQPPEFATGLALFCVVPTTLGVGVALTAASKGNQALALLLTVATNLLGIVTVPYELRLVLSTGSVSTVSVEPGSLVVKLILTVLVPSVIGKLARDLFKPVQRFVTRFKTPLSLFSTLNLACIVWQTLSGARQTLLQQPFVAVLLVVVASSLLHVVMLLFNGLVVRYLLRLPFREAVAVVIMSSQKSAPVAVTVISYLTPSLTQQGLMAIPCILGQLAQIFIGSALA-KW 401
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Match: A0A5B8MCM7_9CHLO (Putative sodium/metabolite cotransporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCM7_9CHLO) HSP 1 Score: 271 bits (694), Expect = 2.630e-80 Identity = 150/330 (45.45%), Postives = 218/330 (66.06%), Query Frame = 1
Query: 508 RVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVD----DYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIITVLVPLVVGKVIREVVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDDLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGDV--GQEGLMTIPCIIGHISQLFIDAYIASRW 1479
+V F KN LPLG A +A+ +P PG+ V K V+ DY++V + + +IF+ SG TLKTDDI +A GY G VAIL IT +GF ++PF F+ GLSVFC VPTTLSSGV LV GGN ALALLLTV TNLLG++TVPF VK V+++ +D D + LL+KL IT+L PL++GK++R + K K + S+ +S L+++VWQTLS+AQ ++ + +L ++A GIG+H+ +L N+ I +L++++ E++A++L +SQKTLP++VTVI FL + G GL+ +PC++ H+ Q+ ID+ I SRW
Sbjct: 4 KVWPFLKKNFLPLGLVTAATVAMVYPPPGREVQKHMVEVNGNDYKLVSSCLIFLIFLSSGFTLKTDDIMKAAKNYVAVGY--GFVAILLITPTLGFGIMKLPFKPKAFASGLSVFCAVPTTLSSGVALVTQGGGNAALALLLTVGTNLLGILTVPFAVKLVLDSEEDFDFDALSLLIKLAITILAPLILGKLLRHSHQALGKFAKEKKQKFSMANSLCLVLIVWQTLSKAQPEVIDQSAGDLLLLVAGGIGIHIAFLVFNF-ISVSLLRVEQPEYRALLLCTSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSRW 330 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig126.2149.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig126.2149.1 >prot_Ecto-sp13_S_contig126.2149.1 ID=prot_Ecto-sp13_S_contig126.2149.1|Name=mRNA_Ecto-sp13_S_contig126.2149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp MTTLVESRGQRVRKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYback to top mRNA from alignment at Ecto-sp13_S_contig126:19856..24357- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig126.2149.1 ID=mRNA_Ecto-sp13_S_contig126.2149.1|Name=mRNA_Ecto-sp13_S_contig126.2149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4502bp|location=Sequence derived from alignment at Ecto-sp13_S_contig126:19856..24357- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig126:19856..24357- >mRNA_Ecto-sp13_S_contig126.2149.1 ID=mRNA_Ecto-sp13_S_contig126.2149.1|Name=mRNA_Ecto-sp13_S_contig126.2149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig126:19856..24357- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |