prot_Ecto-sp13_S_contig9811.21465.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9811.21465.1
Unique Nameprot_Ecto-sp13_S_contig9811.21465.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9811.21465.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 9.040e-73
Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 0 
Query:    1 MRYSVVTEDGRRLGGDEREGAEPELEGGGRGGGGGSVLREFLAGRVGDAMLRMANQSIFADMLEA----IQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVDTGTQ 133
            MRYSVVTEDGRRLGGDEREGAEP LEGGGRG  GGSVLREFLAGRVGDAMLRMANQSIFADMLEA    IQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVD+ +Q
Sbjct:  131 MRYSVVTEDGRRLGGDEREGAEPGLEGGGRGXXGGSVLREFLAGRVGDAMLRMANQSIFADMLEARFRAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVDSRSQ 267
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BLAST of mRNA_Ecto-sp13_S_contig9811.21465.1 vs. uniprot
Match: W7U7S3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7S3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.700e-10
Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 0 
Query:   52 RMANQSIFADMLEAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGG-GGPGAPETLEIAHIKGTASVDTGTQVWWGCLVR 141
            R ANQ +FADMLE IQ R  R DLE+ V+SRD +F +D  +  +E  ++F +S  GG  GP     +E+A ++G   V+   Q    CLV+
Sbjct:  225 RFANQILFADMLETIQRRFFRADLEVGVVSRDSKFVVDVDADSVEGTAIFHISLAGGTDGP-----VEVARLQGRIKVEVKKQ----CLVQ 306
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BLAST of mRNA_Ecto-sp13_S_contig9811.21465.1 vs. uniprot
Match: A0A7S3UTS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTS6_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 3.860e-9
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0 
Query:   38 LREFLAGRVGDAMLRMANQSIFADMLEAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLF 101
            ++E L       ++R ANQS+FAD+L AIQ R LRPDL +++ISRD  F LD     +EA S F
Sbjct:   60 VQEVLMLHKWSLVVRYANQSLFADLLSAIQDRFLRPDLNVAIISRDSSFKLDLKKETVEAKSEF 123
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9811.21465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JKF0_9PHAE9.040e-7392.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U7S3_9STRA3.700e-1041.76Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3UTS6_HETAK3.860e-948.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9811contigEcto-sp13_S_contig9811:3217..4510 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9811.21465.1mRNA_Ecto-sp13_S_contig9811.21465.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9811 1776..4940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9811.21465.1 ID=prot_Ecto-sp13_S_contig9811.21465.1|Name=mRNA_Ecto-sp13_S_contig9811.21465.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp
MRYSVVTEDGRRLGGDEREGAEPELEGGGRGGGGGSVLREFLAGRVGDAM
LRMANQSIFADMLEAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSL
FEVSTVGGGGPGAPETLEIAHIKGTASVDTGTQVWWGCLVRGKCE*
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