prot_Ecto-sp13_S_contig981.21462.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig981.21462.1
Unique Nameprot_Ecto-sp13_S_contig981.21462.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length527
Homology
BLAST of mRNA_Ecto-sp13_S_contig981.21462.1 vs. uniprot
Match: D7G4A4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A4_ECTSI)

HSP 1 Score: 854 bits (2207), Expect = 3.630e-309
Identity = 444/514 (86.38%), Postives = 456/514 (88.72%), Query Frame = 0
Query:    1 MPAASDVENAGDYFEVKQGSSELRKLAFAVEDASYSCPDGPSSSLEETGTTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRDFVEVKRRVGLAHGTRTDVKIGHLPCVYVRVECRRRKTGSGGVSLYELVPVGVPATCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAVLERLILPPSFLRPAGGAVNPYDPDPVRKGPASTGGSSAHALLHTHRLLSPKPSPGLAPGGEGLRSRHFPPFPDAAAGAAAAAGATSGVQFFRGGRKNQLPIDVGRRQGRGGVVSFDEGSSPAAHPYPPRGEKKSGGAXXXXXXXXXXXXXXGVPLPYQGITARASHHPFGHLTHGLVANAAGVAGTPANCNADPGRENESEGRLTAPPLEQQPEPRHAYSSSGNRGGHFFGARTGAGGRRPSGGSVASTRPFPVHRWGVEGRDEGGAGVDSSGNLDGLRRPKGIGNEERRKDSFGPDFGYDEARTGGRNSSPYPLGSHSE 514
            MPAASDVENAGDYFEVKQGSSELRKLAF VEDASYSCPDGPSSSL ETG TSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRDFVEVKR VGLAHGTRTDVK+GHLPCVYVRVECRRRKTGSGGVSLYELVPVG+PA CVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRA LERLILPPSFLRPAGGAVNPYDPDPVRKGPASTG   AHALLHTHRLLSP PSP LAPGGEGLR  HF               ATSGV FFRG RK++LPIDVGRRQGRG VVSF++  SPA+HPYPPRGE+     XXXXXXX       GVPLPYQG+TARASHHPF HLTHG VANAAGVAGTPA+ NADPGREN +EGRL AP LEQQP PRH+YSSSGN GGHFFGARTGAG RRPSGGSVAS RPFPVHRWGVEGRDEGGAGVDSSGNLDGLRR K IGNEERRKDSFGP FGYDEARTGGRNSSPYPLGSHSE
Sbjct:    1 MPAASDVENAGDYFEVKQGSSELRKLAFTVEDASYSCPDGPSSSLGETGRTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRDFVEVKRGVGLAHGTRTDVKVGHLPCVYVRVECRRRKTGSGGVSLYELVPVGIPARCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAALERLILPPSFLRPAGGAVNPYDPDPVRKGPASTGAGVAHALLHTHRLLSPTPSPRLAPGGEGLRGPHFXXXXXXXXXXXXXXXATSGVHFFRGERKDELPIDVGRRQGRGAVVSFEQDYSPASHPYPPRGEEDX--XXXXXXXXAGVGRRVGVPLPYQGMTARASHHPFRHLTHGPVANAAGVAGTPADRNADPGRENATEGRLAAPRLEQQPMPRHSYSSSGNGGGHFFGARTGAGDRRPSGGSVASARPFPVHRWGVEGRDEGGAGVDSSGNLDGLRRQKSIGNEERRKDSFGPGFGYDEARTGGRNSSPYPLGSHSE 512          
BLAST of mRNA_Ecto-sp13_S_contig981.21462.1 vs. uniprot
Match: A0A6H5JC74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC74_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.450e-53
Identity = 96/118 (81.36%), Postives = 103/118 (87.29%), Query Frame = 0
Query:  346 GVPLPYQGITARASHHPFGHLTHGLVANAAGVAGTPANCNADPGRENESEGRLTAPPLEQQPEPRHAYSSSGNRGGHFFGARTGAGGRRPSGGSVASTRPFPVHRWGVEGRDEGGAGV 463
            GVPLPYQG+TA ASHHPF +LTHG VANAAGVAGTPA+ NADPGRENE+EGRL APPLEQQPEPRH+YSSSG+ G HFF ARTG G RRPSGGS AS RPF VHR GVEGR+EGGAG 
Sbjct:   33 GVPLPYQGMTAWASHHPFRNLTHGPVANAAGVAGTPADRNADPGRENETEGRLAAPPLEQQPEPRHSYSSSGDGGVHFFRARTGGGDRRPSGGSNASARPFLVHRRGVEGREEGGAGA 150          
BLAST of mRNA_Ecto-sp13_S_contig981.21462.1 vs. uniprot
Match: K3XB97_GLOUD (XRCC1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB97_GLOUD)

HSP 1 Score: 85.1 bits (209), Expect = 1.090e-14
Identity = 56/175 (32.00%), Postives = 92/175 (52.57%), Query Frame = 0
Query:   11 GDYFEVKQGSSELRKLAFAVEDASYSCPDGPSSSLEETGTTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRDFVEVKRRVGLAHGTRTDVKIGHLPCVYVRVECRRRKTGSGGVSLYELVPVGVPATCVGLFMGPCMEDLTYKSTERLLFGPSLRTS 185
            G   +VK     +  + F V  AS       +++L E  T + W+  A     V+L L  K LLS +R+ N+++  + +S++V   R R +V VKR   + H     +KIG +PC ++R+E  R    S  ++++ ++P+GVP   +    GP + +L   +TE LLFG SLR S
Sbjct:   73 GTRAKVKTEDFGVGPVEFHVRHASGMASSCTTANLLEYSTKTWWQSYARTKETVVLALTSKTLLSEIRILNKNACAVDVSVAVEN-RPRSYVSVKRMQMMPHAREVSIKIGFIPCQFIRLEFMRHSHAS--IAVHGILPLGVPCHEIEDGSGPSLCNLLNHATENLLFGSSLRAS 244          
BLAST of mRNA_Ecto-sp13_S_contig981.21462.1 vs. uniprot
Match: D7G4C0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4C0_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 4.670e-14
Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 0
Query:  161 MGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAVLE 196
            MGPCMEDLTYKSTERLLF PSLRTSHAPVCHRA LE
Sbjct:    1 MGPCMEDLTYKSTERLLFDPSLRTSHAPVCHRAALE 36          
BLAST of mRNA_Ecto-sp13_S_contig981.21462.1 vs. uniprot
Match: A0A5D6YRF0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YRF0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-13
Identity = 52/160 (32.50%), Postives = 89/160 (55.62%), Query Frame = 0
Query:   26 LAFAVEDASYSCPDGPSSSLEETGTTSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRDFVEVKRRVGLAHGTRTDVKIGHLPCVYVRVECRRRKTGSGGVSLYELVPVGVPATCVGLFMGPCMEDLTYKSTERLLFGPSLRTS 185
            + F V  AS +      ++L++    SCW+  +     V+L L +K+LLS +R+ N+++  + +S++V   R R +V VKR   +AH     VKIG +PC +VR+E  R    S  ++++ ++ +GV  + +    GP + +L   +TE LLFG SL  S
Sbjct:   67 IGFRVRRASGAAGGFQPANLQQYSARSCWQSFSRAKESVVLELDDKSLLSEIRILNKNACAVDVSLAVED-RPRSYVTVKRMQTMAHSREVGVKIGFIPCRFVRLEFSRHSHAS--IAVHGVMLLGVRCSEIEDGSGPSLCNLLSHATENLLFGSSLHAS 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig981.21462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G4A4_ECTSI3.630e-30986.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JC74_9PHAE1.450e-5381.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K3XB97_GLOUD1.090e-1432.00XRCC1_N domain-containing protein n=1 Tax=Globispo... [more]
D7G4C0_ECTSI4.670e-1494.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A5D6YRF0_9STRA1.180e-1332.50Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig981contigEcto-sp13_S_contig981:12327..16917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig981.21462.1mRNA_Ecto-sp13_S_contig981.21462.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig981 11539..17125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig981.21462.1 ID=prot_Ecto-sp13_S_contig981.21462.1|Name=mRNA_Ecto-sp13_S_contig981.21462.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=527bp
MPAASDVENAGDYFEVKQGSSELRKLAFAVEDASYSCPDGPSSSLEETGT
TSCWKGGAGENGWVLLRLHEKALLSFLRVRNRSSSEISISISVRGKRRRD
FVEVKRRVGLAHGTRTDVKIGHLPCVYVRVECRRRKTGSGGVSLYELVPV
GVPATCVGLFMGPCMEDLTYKSTERLLFGPSLRTSHAPVCHRAVLERLIL
PPSFLRPAGGAVNPYDPDPVRKGPASTGGSSAHALLHTHRLLSPKPSPGL
APGGEGLRSRHFPPFPDAAAGAAAAAGATSGVQFFRGGRKNQLPIDVGRR
QGRGGVVSFDEGSSPAAHPYPPRGEKKSGGAGAGSNSSAGVGRGGGVPLP
YQGITARASHHPFGHLTHGLVANAAGVAGTPANCNADPGRENESEGRLTA
PPLEQQPEPRHAYSSSGNRGGHFFGARTGAGGRRPSGGSVASTRPFPVHR
WGVEGRDEGGAGVDSSGNLDGLRRPKGIGNEERRKDSFGPDFGYDEARTG
GRNSSPYPLGSHSEEEEAEEEEGDSL*
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