prot_Ecto-sp13_S_contig9801.21457.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9801.21457.1
Unique Nameprot_Ecto-sp13_S_contig9801.21457.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1141
Homology
BLAST of mRNA_Ecto-sp13_S_contig9801.21457.1 vs. uniprot
Match: A0A6H5L524_9PHAE (DHC_N2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L524_9PHAE)

HSP 1 Score: 1562 bits (4044), Expect = 0.000e+0
Identity = 897/1112 (80.67%), Postives = 938/1112 (84.35%), Query Frame = 0
Query:   25 ELALARARETTSLLRSLREVQADRFLPPDGVEGEEGMPTDNGVVAAMRAWNPVASSASSAGTGVSGSLAFLGDGNDGGVRSKSGLLGRNATGAAKITAGGIAGSTVRARIGLGRMTLPLRGFRDRERTPVEMATGESAAXXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLAATTAPLPSSPNGDRCIAN-------RSRAAAVGPGTRPTGHRAFWLEPTGVERLGSYYSPAAQLLYLDVSRGCLAWRESANTGGSTCNDGEINSGGVGGGLGSRMRATATPKLARRDAAREQTSATDSANPQGCIGIVSNGTRTASQGGPNCVNATVVTRTGSSEKDEPGLGLRTPYMESECHNRPTYAGRGGGXXXPGVPSSSEAFQVSRPHDSNHSSRNDGQEGRSETLMSSSPPDAIAAGAGVQSPKLPSEGNNNTVGPLVPESSPGRERTSDRKCLPRAGQEGALAGCEVAHPPRSSSPPGKRNQTPPAVLFKIRRRPDDGTGQRDDDRLRCPEEGRGSMNGEQAELWMGQRSDGNGDGGGWASAGSVQAANPELEVSDAAGRRQAGFAR---------------YQYYIQCDSTLAESVTVLQPPWQAGIVRKVLHGLSGRXXXXXXXXXXXXXXXXXXXXGCNTSGRHNGTSGGWDVERSNDEEHSCSESDNXXXXXXXXXXXRYSRPGGKYVEGTGTENVPAKDAQEGGQGEEEGE---EGDLFEVHVEGPAPVAKTAQHKVPPLAVTSGRDQPLLSPTTYSGGGRVVGGGGSVFSSRVDGASRATAFNRAANTAKRSSARTPRGVVGPGPGEVRMPEVPDGWKAGVEARLEETCEAFRASIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRFVRAREALNMGQITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRIRRLLYPGLSEALKAQLGVGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDLKAFFRIHAAVDASNKDDDDDGNDETHNRNDSSDATGVDASLSKRPSLHLAGSGGGDRGRGEACYCPPIFKIFLE 1111
            +LA ARARETTSLLRSLREVQADR LPPDGVEGEEGMPTDNGVVAAMRAWNP ASSASSAGTGVSGSLA LGDGNDG VRSKSGLLG++ATGAAKITAG I GSTVRARIGLGR+TLPLRGFRDR RTPV MATG+SAAXXXXXXXXXXXXX LMDVHARLRGSVLSASPSPMARLLAATTAP PSSP GDR IAN       RSRAAAV PGTRPTGHRA WLEPTGVERLGSYYSPAAQLLYLDVSRGCLAWRESANTGG TCNDG  ++GGVGGGLGSR+   ATPKLARRDAAR ++S TDSAN QG  GIVS+ TR ASQ GPN VNA VVTRTGSSEKD   LGLRTP+ ESECHNRP YAG G G   PGVPSSS+A  +SRPHDS+H SRNDG EGRSETLMSSSPPDAIAAGAGVQ P+LPSEGNNNTVGPLV ES PGRE+ SDR C PRAGQEGALAGCEVAHPPRS SPP KR Q+PPAVL KIR R D+GT QRDDDRL CP EG GSM GE+ ELWMGQRSDGNGDGGGWA AG+V AANP LEVSDA GRRQAGFAR               Y +YIQCD TLAESVTVLQPPWQAGIVRKV+HGLSGR XXXXXXXXX            NTSG H GTS G DVE+SNDEE + SESDN           RYSRPGGK VEGTGTENVP KDAQ+GG+         EGDLFEVHVEGP+P+AKTAQHKVPPLAVTSGRD P  SPTT S GGR VGGG SVFSSRV         NRAA+TAKR  ARTPRGVVGPGPGEVRMPE+P GWKAGVEARLEETCE+FR+SIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRR+VRAREALNMGQITGSPALVAAQALLA CRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARR+RRLLYPGLSEALKAQLGVGS GTRAT+AELATR K SPPDGHVRRYLAAVNVMTASILRGMVETAISDL+AFFRIHAAV A+N              N SSDATGVDAS+SKRP L+LAGSGGGDRGRGEACYCPPIFK+  E
Sbjct:  185 QLAQARARETTSLLRSLREVQADRCLPPDGVEGEEGMPTDNGVVAAMRAWNPGASSASSAGTGVSGSLALLGDGNDGDVRSKSGLLGKDATGAAKITAGEITGSTVRARIGLGRITLPLRGFRDRGRTPVGMATGDSAAXXXXXXXXXXXXX-LMDVHARLRGSVLSASPSPMARLLAATTAPSPSSPYGDRGIANSILPERKRSRAAAVEPGTRPTGHRALWLEPTGVERLGSYYSPAAQLLYLDVSRGCLAWRESANTGGFTCNDGGSDNGGVGGGLGSRILLPATPKLARRDAARGKSSYTDSANAQGYDGIVSSITRAASQAGPNGVNAKVVTRTGSSEKDGHELGLRTPHKESECHNRPAYAGGGDGGCGPGVPSSSKACDMSRPHDSSHDSRNDGHEGRSETLMSSSPPDAIAAGAGVQPPELPSEGNNNTVGPLVTESLPGREKASDRSCPPRAGQEGALAGCEVAHPPRSPSPPVKRRQSPPAVLSKIRLRLDNGTDQRDDDRLPCPGEGCGSMEGERVELWMGQRSDGNGDGGGWAVAGAVHAANPGLEVSDATGRRQAGFARCRGVIGSSVCLVCVRYHHYIQCDPTLAESVTVLQPPWQAGIVRKVIHGLSGRGXXXXXXXXX------------NTSGCHTGTSRGRDVEKSNDEEDTSSESDNAGAGVWGIGGGRYSRPGGKGVEGTGTENVPTKDAQDGGEXXXXXXXXXEGDLFEVHVEGPSPLAKTAQHKVPPLAVTSGRDHPPQSPTTNSSGGRGVGGGASVFSSRV---------NRAADTAKRLRARTPRGVVGPGPGEVRMPELPGGWKAGVEARLEETCESFRSSIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRYVRAREALNMGQITGSPALVAAQALLATCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRVRRLLYPGLSEALKAQLGVGSNGTRATSAELATRAKPSPPDGHVRRYLAAVNVMTASILRGMVETAISDLQAFFRIHAAVHANNXXXXXXXXXXXXXXNCSSDATGVDASMSKRPFLYLAGSGGGDRGRGEACYCPPIFKVIRE 1274          
BLAST of mRNA_Ecto-sp13_S_contig9801.21457.1 vs. uniprot
Match: D7G491_ECTSI (Similar to Dynein heavy chain 3, axonemal (Axonemal beta dynein heavy chain 3) (Ciliary dynein heavy chain 3), partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G491_ECTSI)

HSP 1 Score: 1560 bits (4040), Expect = 0.000e+0
Identity = 901/1129 (79.81%), Postives = 941/1129 (83.35%), Query Frame = 0
Query:   25 ELALARARETTSLLRSLREVQADRFLPPDGVEGEEGMPTDNGVVAAMRAWNP---VASSASSAGTGVSGSLAFLGDGNDGGVRSKSGLLGRNATGAAKITAGGIAGSTVRARIGLGRMTLPLRGFRDRERTPVEMATGESAAXXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLAATTAPLPSSPNGDRCIAN-------RSRAAAVGPGTRPTGHRAFWLEPTGVERLGSYYSPAAQLLYLDVSRGCLAWRESANTGGSTCNDGEINSGGVGGGLGSRMRATATPKLARRDAAREQTSATDSANPQGCIGIVSNGTRTASQGGPNCVNATVVTRTGSSEKDEPGLGLRTPYMESECHNRPTYAGRGGGXXXPGVPSSSEAFQVSRPHDSNHSSRNDGQEGRSETLMSSSPPDAIAAGAGVQSPKLPSEGNNNTVGPLVPESSPGRERTSDRKCLPRAGQEGALAGCEVAHPPRSSSPPGKRNQTPPAVLFKIRRRPDDGTGQRDDDRLRCPEEGRGSMNGEQAELWMGQRSDGNGDGGGWA-SAGSVQAANPELEVSDAAGRRQAGFARYQYYIQCDSTLAESVTVLQPPWQAGIVRKVLHGLSGRXXXXXXXXXXXXXXXXXXXXGCNTSGRHNGTSGGWDVERSNDEEHSCSESDNXXXXXXXXXXXRYSRPGGKYVEGTGTENVPAKDAQEGGQGEEEGEEG-DLFEVHVEGPAPVAKTAQHKVPPLAVTSGRDQPLLSPTTYSGGGRVVGGGGSVFSSRVDGASRATAFNRAANTAKRSSARTPRGVVGPGPGEVRMPEVPDGWKAGVEARLEETCEAFRASIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRFVRAREALNMGQITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRIRRLLYPGLSEALKAQLGVGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDLKAFFRIHAAVDASNKDDDDDGNDETHNRNDSSDATGVDASLSKRPSLHLAGSGGGDRGRGEACYCPPIFKIFLEDRCSSPSSYRGSTLTCRKSLRDLKEAVMDV 1141
            +LALARARETTSLLRSLREVQADRFLPPDGVEGEEGMPTDNGVVAAMRAWNP    ASSASSAGTGVSGSLAF GDGNDG +R+K+GLLG+NATGAAKITAG IAGSTVRARIGLGRMTLPLRGFRDR RTPV +ATGESAAXXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLL ATTAP PSSPNGDR IAN       +SRAAAV PGTRPTGH + WLEPTGVERLGSYYSPAAQLLYLDV+RGCLAWRE+ANTGG TCN+G  N+ GVGGGLGSR+ A ATPKLARRDAAR QTS TDSANPQ  +G+V+N TR ASQGGPN VNATVVT TGSSEKD   LGLRTP+MESECHNRP YAG G  XXXPGVPSSSEA Q+SRPHDS+HSSRNDGQEGRSET MSSSPPDA  A AGVQSP+LPS+GNNNTVGPLVPESSPGRERTSDR C PRAGQ GALAGCEV +PPRSSSPP KRNQTPPAVL KIRRRPDD TGQRDDDRL CP EGRGSM GE+AELWMGQRS GNGD GGWA SAG+VQAANPELEVSDAAGRRQAGFARY +Y+QCDSTLAESVTVLQPPWQAGIVRKV+HGLSGR   XXXXXXXXX         CNTSGRH+GT  GWD+E+SNDEE + SESDN           RYSRPG K V GTGTEN+PAKDAQEGG          D+FEVHVEGPAPVAKTAQHKVP LAVTSG DQP  SPTT SGGGR V GGGSVF+SRVDG  RATAFNRAANTAKR  ARTPRGV GPGPGE RMPEVPDGWKAGVEA LEETCEAFRASIRRAVLNYV+LDAGQRDRLGI AVPPGFAS+GWGWGKGRGI KSPPEW+RRFVRAREALNMGQITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARR+RRLLYPGLSEALKAQLGVGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDL+                                                                     IFLEDRCSSP+S RGSTLTCRKSLRDLKEAVMDV
Sbjct:  165 QLALARARETTSLLRSLREVQADRFLPPDGVEGEEGMPTDNGVVAAMRAWNPGRSSASSASSAGTGVSGSLAFSGDGNDGDIRTKNGLLGKNATGAAKITAGEIAGSTVRARIGLGRMTLPLRGFRDRGRTPVGIATGESAAXXXXXXXXXXXXXXLMDVHARLRGSVLSASPSPMARLLDATTAPSPSSPNGDRGIANSVLPERKQSRAAAVEPGTRPTGHLSLWLEPTGVERLGSYYSPAAQLLYLDVNRGCLAWRENANTGGFTCNEGGSNTRGVGGGLGSRILAPATPKLARRDAARGQTSPTDSANPQVYVGMVANVTRVASQGGPNGVNATVVTGTGSSEKDGHKLGLRTPHMESECHNRPAYAGGGXXXXXPGVPSSSEARQMSRPHDSSHSSRNDGQEGRSETWMSSSPPDATPAKAGVQSPELPSDGNNNTVGPLVPESSPGRERTSDRNCPPRAGQVGALAGCEVTYPPRSSSPPVKRNQTPPAVLSKIRRRPDDETGQRDDDRLPCPGEGRGSMEGERAELWMGQRSGGNGDRGGWAASAGAVQAANPELEVSDAAGRRQAGFARYHHYLQCDSTLAESVTVLQPPWQAGIVRKVVHGLSGRGGGXXXXXXXXX---------CNTSGRHSGTPRGWDLEKSNDEEDTSSESDNGGVGVRGIGGGRYSRPGCKDVGGTGTENIPAKDAQEGGXXXXXXXXXXDVFEVHVEGPAPVAKTAQHKVPYLAVTSGGDQPPQSPTTNSGGGRGVVGGGSVFTSRVDGTPRATAFNRAANTAKRPRARTPRGVAGPGPGEARMPEVPDGWKAGVEACLEETCEAFRASIRRAVLNYVVLDAGQRDRLGISAVPPGFASQGWGWGKGRGIQKSPPEWQRRFVRAREALNMGQITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRVRRLLYPGLSEALKAQLGVGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDLQ---------------------------------------------------------------------IFLEDRCSSPNSDRGSTLTCRKSLRDLKEAVMDV 1215          
BLAST of mRNA_Ecto-sp13_S_contig9801.21457.1 vs. uniprot
Match: A0A7S3XR73_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR73_HETAK)

HSP 1 Score: 104 bits (259), Expect = 1.990e-19
Identity = 90/279 (32.26%), Postives = 122/279 (43.73%), Query Frame = 0
Query:  770 RVVGGGGSVFSSRVDGASRATAFNRAANTAKRSSARTPRGVVGPGPGEVRMPEVPDGWKAGVEARLEETCEAFRASIRRAVLNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRFVRAREALNMGQITGSPALVAAQALLAKCRGTR--LLRLPKSAAEIQASSWSAMTAEEFRSSQLSHLSRKARRIRRLLYPGLSEALKAQLGVGSKGTRATTAELATRTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDLKAFFRIHAA 1046
            R  GGGG    +R D A+     +R   T +    R   G  GP P  V   E   G    +   LE        S  +A L+YVLLD G+R RLG+P +P     E WGWG G+   ++P  WRR    A   L+   +  +PA+ A+  L+    G    L+ LP SAAE  A  W+     +F + Q S LSR  + I    YP LS+     +  G+                 P D  VRR+L  VN      LR +V  ++  L AFF + AA
Sbjct:  122 RSGGGGGRDDRARYDTAAWDQQLDR--RTLENILRRAFPGPAGPPPPLVGAGEXXXGGPPALLLCLEAAHRGRGRSAHKATLDYVLLDEGERRRLGVPEIPRELRPEAWGWGCGKAAKRTPAWWRRGVQDAHARLDGRALMATPAMKASLRLITAAAGPAACLVDLPASAAEFLARPWAPQRPADFFNHQHSRLSRTRKEIGDACYPALSQIFMEAVTAGAL----------------PADALVRRHLRLVNRALGVRLRALVLRSLRRLGAFFEVFAA 382          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9801.21457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L524_9PHAE0.000e+080.67DHC_N2 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G491_ECTSI0.000e+079.81Similar to Dynein heavy chain 3, axonemal (Axonema... [more]
A0A7S3XR73_HETAK1.990e-1932.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9801contigEcto-sp13_S_contig9801:55..6158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9801.21457.1mRNA_Ecto-sp13_S_contig9801.21457.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9801 55..6158 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9801.21457.1 ID=prot_Ecto-sp13_S_contig9801.21457.1|Name=mRNA_Ecto-sp13_S_contig9801.21457.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1141bp
SNRNRGGIHAFGKCYIPYTSRGNKELALARARETTSLLRSLREVQADRFL
PPDGVEGEEGMPTDNGVVAAMRAWNPVASSASSAGTGVSGSLAFLGDGND
GGVRSKSGLLGRNATGAAKITAGGIAGSTVRARIGLGRMTLPLRGFRDRE
RTPVEMATGESAAATAATVVSPPPPPPLMDVHARLRGSVLSASPSPMARL
LAATTAPLPSSPNGDRCIANRSRAAAVGPGTRPTGHRAFWLEPTGVERLG
SYYSPAAQLLYLDVSRGCLAWRESANTGGSTCNDGEINSGGVGGGLGSRM
RATATPKLARRDAAREQTSATDSANPQGCIGIVSNGTRTASQGGPNCVNA
TVVTRTGSSEKDEPGLGLRTPYMESECHNRPTYAGRGGGGGGPGVPSSSE
AFQVSRPHDSNHSSRNDGQEGRSETLMSSSPPDAIAAGAGVQSPKLPSEG
NNNTVGPLVPESSPGRERTSDRKCLPRAGQEGALAGCEVAHPPRSSSPPG
KRNQTPPAVLFKIRRRPDDGTGQRDDDRLRCPEEGRGSMNGEQAELWMGQ
RSDGNGDGGGWASAGSVQAANPELEVSDAAGRRQAGFARYQYYIQCDSTL
AESVTVLQPPWQAGIVRKVLHGLSGRGGGGGGGGGGGGGGVGGVGGGCNT
SGRHNGTSGGWDVERSNDEEHSCSESDNGGAGVGGIGGGRYSRPGGKYVE
GTGTENVPAKDAQEGGQGEEEGEEGDLFEVHVEGPAPVAKTAQHKVPPLA
VTSGRDQPLLSPTTYSGGGRVVGGGGSVFSSRVDGASRATAFNRAANTAK
RSSARTPRGVVGPGPGEVRMPEVPDGWKAGVEARLEETCEAFRASIRRAV
LNYVLLDAGQRDRLGIPAVPPGFASEGWGWGKGRGIHKSPPEWRRRFVRA
REALNMGQITGSPALVAAQALLAKCRGTRLLRLPKSAAEIQASSWSAMTA
EEFRSSQLSHLSRKARRIRRLLYPGLSEALKAQLGVGSKGTRATTAELAT
RTKSSPPDGHVRRYLAAVNVMTASILRGMVETAISDLKAFFRIHAAVDAS
NKDDDDDGNDETHNRNDSSDATGVDASLSKRPSLHLAGSGGGDRGRGEAC
YCPPIFKIFLEDRCSSPSSYRGSTLTCRKSLRDLKEAVMDV
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