prot_Ecto-sp13_S_contig9794.21445.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9794.21445.1
Unique Nameprot_Ecto-sp13_S_contig9794.21445.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length432
Homology
BLAST of mRNA_Ecto-sp13_S_contig9794.21445.1 vs. uniprot
Match: D7FWS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS5_ECTSI)

HSP 1 Score: 687 bits (1774), Expect = 2.280e-245
Identity = 377/445 (84.72%), Postives = 387/445 (86.97%), Query Frame = 0
Query:    1 MFTVRVSKTPTDRIKIGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYTFAIPGGTRRTPIRASGTKAFFLERNDGRTCRYVKLTAPPASSSGL-AAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPDEKTAAA------KAATVAKLSSMSQSWAGERGGRRGSVSGCSISRMTDGSESVCTSTPATDADGSERGSCDEAGXXXXXXXXXXXXXXXXXXXXXDGDGDVQSVLDDDCLVSIARR--NSLHHADTATAGGGAGDSDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRLQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAVAPACAAAAGASDSPSTCV-----GSGGSVASSCDIVLSQR 431
            +FT+RVSKTPTDRI IGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYTFA+PG T+RTP+RASGTKAFFLERNDGRTCRYVKLTAPPASS G+ AAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPDE+TAAA      KAATVAKLSS+SQSWAG RGG RGSVSGCS SRMTDGSESVCTSTPATDADGSE GSCDEAG    XXXXXXXXXXXXX    DGDGDV+SVLDD CL SIARR  NSLHHADT TAG GAG  DASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRR QISCWR GRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSA AP                      SGGSVASS D V SQ+
Sbjct:   86 IFTIRVSKTPTDRINIGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYTFAVPGSTKRTPMRASGTKAFFLERNDGRTCRYVKLTAPPASSPGVVAAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPDEETAAAXXXXXXKAATVAKLSSLSQSWAGGRGGPRGSVSGCSTSRMTDGSESVCTSTPATDADGSEAGSCDEAGGSSEXXXXXXXXXXXXXSSDGDGDGDVESVLDDVCLASIARRKGNSLHHADTGTAGSGAGAGDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRNGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAAAPXXXXXXXXXXXXXXXXXXXXXASGGSVASSFDFVFSQQ 530          
BLAST of mRNA_Ecto-sp13_S_contig9794.21445.1 vs. uniprot
Match: A0A6H5JVR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR9_9PHAE)

HSP 1 Score: 685 bits (1767), Expect = 9.240e-243
Identity = 369/404 (91.34%), Postives = 379/404 (93.81%), Query Frame = 0
Query:    1 MFTVRVSKTPTDRIKIGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYTFAIPGGTRRTPIRASGTKAFFLERNDGRTCRYVKLTAPPASSSGLAAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPDEKTAAA--KAATVAKLSSMSQSWAGERGGRRGSVSGCSISRMTDGSESVCTSTPATDADGSERGSCDEAGXXXXXXXXXXXXXXXXXXXXXDGDGDVQSVLDDDCLVSIARR--NSLHHADTATAGGGAGDSDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRLQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAVAPAC 400
            +FT+RVSKTPT RIKIGFFCLEKES+LTIGGD+DSWVPGDSMAEALARYTFAIPG TRRTPIRASGTKAFFLERNDGRTCRYVKLTAPPASS G AAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSP+E+TAAA  KAATV KLSS+SQSWAG RGGRRGSVSG S SR+TDGSESVCTSTPATDADGSE  SCDEAG XXXXXXXXXXXXXXXXXX  DG GD++SVLDD CL SIARR  NSLHHADTATAG GAG  DASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRR QISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSA APAC
Sbjct:  200 IFTIRVSKTPTGRIKIGFFCLEKESALTIGGDNDSWVPGDSMAEALARYTFAIPGSTRRTPIRASGTKAFFLERNDGRTCRYVKLTAPPASSPGGAAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPNEETAAAAVKAATVVKLSSLSQSWAGGRGGRRGSVSGSSTSRVTDGSESVCTSTPATDADGSEADSCDEAGGXXXXXXXXXXXXXXXXXXSSDGHGDIESVLDDGCLASIARRKGNSLHHADTATAGSGAGAGDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAAAPAC 603          
BLAST of mRNA_Ecto-sp13_S_contig9794.21445.1 vs. uniprot
Match: A0A061QLQ6_9CHLO (Uncharacterized protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QLQ6_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 3.830e-16
Identity = 49/115 (42.61%), Postives = 71/115 (61.74%), Query Frame = 0
Query:  266 QLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRLQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDF 380
            +L G K+TGD NVPA K SFV  L T+ D  E + +D RP++ F  TG  + NL +R  +++    G+GQINR P  W+PEWVDV  + Y +G R  FS+++    +  R ++DF
Sbjct:   85 RLVGLKLTGDPNVPATKLSFVAAL-TEPDDPEGVLADLRPIIAFPSTGPAVVNLQDR--EVAGLFLGKGQINRDPDVWAPEWVDVRLITY-SGQRKGFSILWHDMGEFWRHIIDF 195          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9794.21445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWS5_ECTSI2.280e-24584.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVR9_9PHAE9.240e-24391.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A061QLQ6_9CHLO3.830e-1642.61Uncharacterized protein n=2 Tax=Tetraselmis sp. GS... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9794contigEcto-sp13_S_contig9794:1418..2713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9794.21445.1mRNA_Ecto-sp13_S_contig9794.21445.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9794 894..3698 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9794.21445.1 ID=prot_Ecto-sp13_S_contig9794.21445.1|Name=mRNA_Ecto-sp13_S_contig9794.21445.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=432bp
MFTVRVSKTPTDRIKIGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYT
FAIPGGTRRTPIRASGTKAFFLERNDGRTCRYVKLTAPPASSSGLAAAGA
VKNLCGLWCAPYGSHGLEIIQLSTDPSCSPDEKTAAAKAATVAKLSSMSQ
SWAGERGGRRGSVSGCSISRMTDGSESVCTSTPATDADGSERGSCDEAGG
SSEAAGGGGGGGGGVDDDSSDGDGDVQSVLDDDCLVSIARRNSLHHADTA
TAGGGAGDSDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELR
SDSRPVVTFLPTGAVMANLANRRLQISCWRKGRGQINRVPGRWSPEWVDV
EFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSAVAPAC
AAAAGASDSPSTCVGSGGSVASSCDIVLSQR*
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