mRNA_Ecto-sp13_S_contig9793.21444.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9793.21444.1
Unique NamemRNA_Ecto-sp13_S_contig9793.21444.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A6H5JYH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYH1_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 1.420e-170
Identity = 277/289 (95.85%), Postives = 282/289 (97.58%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            RQV VSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVE LSV QNLTGLSEHA+QPVVTETQQGSTGLSGTFALDYNDVGGSR+V+FDEDADRMRRKLEEMSTISDVYIDLE+YPSSDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPS SSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTE LLYTADETAVEAV EDLSNVGDVSVSFDPYTPTRIAN TVTVARDSSTAVVTSTRDLRNFLSPGVVIR+GGEDASAGGTLVGTNGE
Sbjct: 6458 RQVEVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEALSVVQNLTGLSEHASQPVVTETQQGSTGLSGTFALDYNDVGGSRKVRFDEDADRMRRKLEEMSTISDVYIDLEEYPSSDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSASSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTETLLYTADETAVEAVLEDLSNVGDVSVSFDPYTPTRIANVTVTVARDSSTAVVTSTRDLRNFLSPGVVIRVGGEDASAGGTLVGTNGE 6746          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 1.250e-169
Identity = 277/289 (95.85%), Postives = 281/289 (97.23%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            RQV VSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVE LSVAQNLTGLSE A+QPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLE+YPS+DSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPS SSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTE LLYTADETAVEAV EDLSNVGDVSVSFDPYTPTRIAN TVTVARDSSTAVV+STRDLRNFLSPGVVIRIGGEDASAGGTL GTNGE
Sbjct: 13941 RQVEVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEALSVAQNLTGLSERASQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEEYPSNDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSASSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTETLLYTADETAVEAVLEDLSNVGDVSVSFDPYTPTRIANATVTVARDSSTAVVSSTRDLRNFLSPGVVIRIGGEDASAGGTLAGTNGE 14229          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A836CIW1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW1_9STRA)

HSP 1 Score: 260 bits (665), Expect = 8.540e-76
Identity = 147/300 (49.00%), Postives = 194/300 (64.67%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHA-------TQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSG--GWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTR--DLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            +QV VS S+ DQYGT++W VTFT NPG TP+GAGD+  L + Q+    +  A       + PV+ E Q+GST +SG+F +DY D  G+R   FDE ADR R KLEEM+TIS V +  ++YP +  G  GWGG  V+ G+ GGYVW++RFL V G Y G TFP G GNVD +    ++L G+ A+   TT T+G+  +GG FALAF G+ T  + YT+D T +EAV EDLSNVG VSV+FD Y PT +A   ++V RD S A + +    DL + L+ G V+RIGG D   G  L GTNG+
Sbjct:  623 QQVDVSMSIPDQYGTVQWVVTFTDNPGQTPSGAGDMPALVIQQDYLHQAPSAGDATLVASNPVIQELQKGSTSMSGSFTVDYGDPNGARTFAFDESADRFRLKLEEMTTISRVQVVRQQYPLAGQGHGGWGGVHVDPGSLGGYVWQVRFLRVFGDYAGFTFPPGAGNVDTLALDFTALQGTVATAKATTYTDGSTALGGSFALAFDGQQTGPVRYTSDSTELEAVLEDLSNVGGVSVAFDHYLPTPVAGVLLSVDRDGSEAAIAAAPGFDLGSILTAGDVVRIGGADVGTG--LTGTNGD 920          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A7S2PKA6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKA6_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.790e-59
Identity = 126/281 (44.84%), Postives = 173/281 (61.57%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQ--NLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSGGWGGTAVE-DGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDAS 834
            R V VSR+++D++GT+EW VTF  NPGV+P GAGDV++L+V Q  + +G+S       V E ++GSTGLSG F +DY+   G++EV FDE   R+ +KLEE+STI +V++  E+YPS+  GGWG   V  DG+ GG+ W + FL  PG  NG TFP G+GNV +     S+L G S+ V  T + +G+  + G F L+ +GE TE + + A   AVE    DL+  G VS S    T  RI    V V +D + A V    DLR +L+PG   RIGG D S
Sbjct:  313 RNVRVSRTILDKFGTVEWVVTFVGNPGVSPAGAGDVDLLNVVQGQDTSGISHSV---FVQEIKKGSTGLSGHFTVDYDSPSGAKEVSFDEPPLRLLKKLEELSTIGNVFVTREQYPSASEGGWGAVPVSNDGSEGGFQWTIYFLRNPGITNGVTFPPGSGNVVSPTIDDSNLGGESSKVEVTEIIDGSQPIVGDFKLSISGEQTEPISHDAAAEAVEQSLNDLAVTGSVSTSSSLRTMQRIPGIQVNVQKDHTIASVIG-GDLRQYLAPGDFFRIGGSDGS 589          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A7S4I964_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I964_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.080e-55
Identity = 124/283 (43.82%), Postives = 167/283 (59.01%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPV-VTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSGGWGGTAVED--GTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISS--LSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDAS 834
            R V ++R+V+D+YG++EW VTFT NPG TP G GD+++L V Q     S   T PV V E Q+GSTGL+G+F +DY    G+REV FDE  +R+  KL EMST+  V+   + YPS  SGGWG  AV +  G  GGY W+L FL  PGT +G TFP G+GN+    PSI S  L G+ A+  +T +TEG   + G F +  +G+ T  + Y +D   +E    DLSN G +S      T   I   TV+ ++D +   VT   DLR  L+PG   R+GG   S
Sbjct:  761 RSVDITRTVLDKYGSIEWLVTFTSNPGETPPGTGDIDMLRVVQGPD--SSGFTNPVFVNEVQKGSTGLAGSFTIDYFSSTGAREVSFDETPERLMMKLGEMSTVGHVWATRDCYPSCSSGGWGSVAVPESSGIRGGYEWRLHFLANPGTTDGFTFPNGSGNISP--PSIDSAHLVGTDATAESTALTEGTTPLTGAFTIFVSGKETLPIPYNSDPVTIEQSLGDLSNTGRMSARSGLCTKKPIEGITVSASKDGNILQVTQ-GDLRQHLAPGDSFRVGGSHES 1038          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: K0RCQ5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RCQ5_THAOC)

HSP 1 Score: 201 bits (512), Expect = 6.920e-55
Identity = 124/287 (43.21%), Postives = 174/287 (60.63%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGE-DASAGGTLVGT 858
            R+V VSR+V+D++G +EW VTFT NPG  P GAG++++LSVAQ+   L   A +  V E   GS  LSG F LD     G R V FDE  +R+ RKLEEMST+  +Y+  E+Y S    GW  + V  G+AGG  W L +L  PG+ +G TFP G+G +   +   S+L GS A+V T+ +++G+  +GG  +L   GE+ E + Y  D   +E+   DL ++G+VSV   P     I+  TV V RDS+  ++ S  DLR+ L+PG ++RIGG  DA  G  LVGT
Sbjct: 2340 RRVDVSRTVLDKFGAVEWLVTFTRNPGTIPPGAGNIDLLSVAQDPDTLGR-AAELSVNEIYAGSAELSGRFTLDLQAPEGPRAVNFDEPPERLARKLEEMSTVGQLYVTREEYGS----GWDSSFVSPGSAGGLEWTLYYLDNPGSSDGATFPPGSGLMPPPLIDHSTLIGSDATVSTSAISQGSAPLGGYLSLTVNGEAMEAIAYNLDAVGLESSLNDLQSIGEVSVKSGPDLTHLISGITVDVDRDSAVGIL-SGGDLRHHLAPGDLLRIGGTPDAPDGAELVGT 2620          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A1V9YQL1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQL1_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.860e-51
Identity = 118/294 (40.14%), Postives = 163/294 (55.44%), Query Frame = 1
Query:   13 VSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPS--------SDSGGWGGTAV-EDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            V+R+VI QYG + W + F  NPG+TP GAG++  L VA       +   Q  VTETQ GS  L GTF +DY+  GG R + F E ADR+ RKL EM+T+  V +   + PS        + +GGW G AV  DGT GGY W++ FL  PG Y G TFP GTGN+D +  +  SL+G+  +     VT G   + G FAL   G  T  + Y+A  + +E   E L  V +V+V+ D  +  RI N   T+A+D + A +    D+  + +PG  IR G    +A   LVG+NG+
Sbjct: 3878 VTRTVIGQYGAVSWLIRFIANPGMTPPGAGNIAPLLVAFMTAPTCQ--CQVTVTETQAGSVPLGGTFTIDYHSTGGPRSILFAESADRLERKLNEMNTLGRVRVTQFQIPSIAVGCTTTTCAGGWDGVAVANDGTRGGYRWRVVFLKNPGAYGGYTFPPGTGNMDPLTVTYPSLTGTLHAANIIVVTNGQAPLTGNFALTLGGAKTSPITYSASASILEDAIEALPTVSEVAVTSDELSLYRIPNAIATIAQDGTVATIAGV-DITQYFAPGDHIRFGPPPTNA---LVGSNGD 4165          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A024UWQ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UWQ8_9STRA)

HSP 1 Score: 184 bits (466), Expect = 9.890e-49
Identity = 115/298 (38.59%), Postives = 170/298 (57.05%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSG--------GWGGTAV-EDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            R+V V ++V+ +YG + W + F  NPG+TP GAGD+  + V Q LT  +   T  V+ ETQ GS  LSG F +DY+ V G R V FD   +R+ R L+EM+T+  V +     PSS +G        GW    V  D T GGY W++RFL  PG ++G TFP GTGN++ +  ++SSL G++ SV   T+ +GA  + G F L   G +T  + Y A    V    E L ++  V+ + D  +   +A  T T+A+D++TA +    D+R + +PG +IR G   A+A   LVG+NG+
Sbjct: 3885 RRVSVQKTVLGKYGAVSWLIRFISNPGMTPPGAGDINAMDV-QFLTAPTCACTVTVM-ETQAGSAPLSGDFTVDYHSVHGPRVVHFDSTQERLERMLDEMNTLGIVRVTKFMIPSSTTGCSQSTCAGGWDNLPVANDRTRGGYRWRVRFLKNPGDFSGFTFPPGTGNMNTLTVTMSSLQGAAKSVDMYTIQQGASPLTGSFTLTHMGTATPPIAYAASAAMVMQALETLPDISHVTTTQDFLSFYAVAGATATIAQDATTATIAGV-DIRQYFTPGDLIRFGPATANA---LVGSNGD 4176          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A418BB51_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BB51_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.350e-48
Identity = 114/298 (38.26%), Postives = 170/298 (57.05%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSDSG--------GWGGTAV-EDGTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            R+V V ++V+ +YG + W + F  NPG+TP GAGD+  + V Q LT  +   T  V+ ETQ GS  LSG F +DY+ V G R V FD   +R+ R L+EM+T+  V +     PSS +G        GW    V  D T GGY W++RFL  PG ++G TFP GTGN++ +  ++SSL G++ SV   T+ +GA  + G F L   G +T  + Y A    V+   E L ++  V+ + D  +   +A  T T+A+D++TA +    D+R + +PG +IR G    +A   LVG+NG+
Sbjct: 3882 RRVSVQKTVLGKYGAVSWLIRFISNPGMTPPGAGDINAMDV-QFLTAPTCACTVTVM-ETQAGSAPLSGDFTVDYHSVHGPRVVHFDSTQERLERMLDEMNTLGIVRVTKFMIPSSTTGCSQSTCAGGWDNLPVANDRTRGGYRWRVRFLKNPGDFSGFTFPPGTGNMNTLTVTMSSLQGAAKSVDMYTIQQGASPLTGSFTLTHMGTATPPIAYAASAAMVKQALETLPDISHVTTTQDFLSFYAVAGATATIAQDATTATIAGV-DIRQYFTPGDLIRFGPATTNA---LVGSNGD 4173          
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Match: A0A6A3J6F6_9STRA (Uncharacterized protein (Fragment) n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J6F6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 8.210e-48
Identity = 119/300 (39.67%), Postives = 161/300 (53.67%), Query Frame = 1
Query:    1 RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSEHATQPVVTETQQGSTGLSGTFALDYNDVG-GSREVKFDEDADRMRRKLEEMSTISDVYIDLEKYPSSD--------SGGWGGTAVED-GTAGGYVWKLRFLTVPGTYNGETFPAGTGNVDAIVPSISS-LSGSSASVVTTTVTEGADEMGGGFALAFAGESTEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSSTAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE 867
            R+V+V R+V  +YG M W + F  NP  TP GAG++  +S        S +     VT+   GS GLSG+F LD+     G RE+ FDED DR++RKL EM TI  V +   KYPS+         SGGWG   V++ GT GGY W++RF+   G YNG TFP G+GNV ++  S SS L G+  SV   T   G+    G FAL      T  L Y+A   A+E   E +   G V V+       +I   T T+ +D  TA +T   D+R F++P  +IR G   A+    L+GTNG+
Sbjct: 1779 RKVLVQRTVHGKYGEMSWHIRFISNPSFTPPGAGNLPDISTTFAAEAGSNNY-DVTVTQVTPGSDGLSGSFLLDFKSFSFGPREISFDEDPDRLQRKLNEMDTIGRVTVKRFKYPSTATGCDDSTCSGGWGDQPVQNPGTRGGYRWRIRFMQATGDYNGYTFPPGSGNVASLSVSRSSTLLGTGVSVDVYTNVPGSSPTTGSFALNTTENQTPSLPYSASAEAIELGIEAMDLFGQVDVTRSYLLTQKIPGATATLTQDGVTATITGVDDIRQFIAPTDIIRFGPSSAN---NLLGTNGD 2074          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9793.21444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYH1_9PHAE1.420e-17095.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNA6_ECTSI1.250e-16995.85Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A836CIW1_9STRA8.540e-7649.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2PKA6_9STRA1.790e-5944.84Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S4I964_9STRA1.080e-5543.82Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0RCQ5_THAOC6.920e-5543.21Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A1V9YQL1_9STRA2.860e-5140.14Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A024UWQ8_9STRA9.890e-4938.59Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A418BB51_9STRA1.350e-4838.26Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A3J6F6_9STRA8.210e-4839.67Uncharacterized protein (Fragment) n=6 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9793contigEcto-sp13_S_contig9793:4579..5445 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score531.2
Seed ortholog evalue3.1e-148
Seed eggNOG ortholog2880.D7FNA6
Model size867
KEGG koko:K12567
KEGG Pathwayko05410,ko05414,map05410,map05414
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.cytoskeletal protein binding
EggNOG OGsKOG0613@1,KOG0613@2759
EC2.7.11.1
Cds size867
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464243.1453598-CDS-Ecto-sp13_S_contig9793:4578..54451681464243.1453598-CDS-Ecto-sp13_S_contig9793:4578..5445Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9793 4579..5445 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9793.21444.1prot_Ecto-sp13_S_contig9793.21444.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9793 4579..5445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9793.21444.1

>prot_Ecto-sp13_S_contig9793.21444.1 ID=prot_Ecto-sp13_S_contig9793.21444.1|Name=mRNA_Ecto-sp13_S_contig9793.21444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
RQVVVSRSVIDQYGTMEWEVTFTMNPGVTPTGAGDVEVLSVAQNLTGLSE
HATQPVVTETQQGSTGLSGTFALDYNDVGGSREVKFDEDADRMRRKLEEM
STISDVYIDLEKYPSSDSGGWGGTAVEDGTAGGYVWKLRFLTVPGTYNGE
TFPAGTGNVDAIVPSISSLSGSSASVVTTTVTEGADEMGGGFALAFAGES
TEKLLYTADETAVEAVFEDLSNVGDVSVSFDPYTPTRIANTTVTVARDSS
TAVVTSTRDLRNFLSPGVVIRIGGEDASAGGTLVGTNGE
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mRNA from alignment at Ecto-sp13_S_contig9793:4579..5445+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9793.21444.1 ID=mRNA_Ecto-sp13_S_contig9793.21444.1|Name=mRNA_Ecto-sp13_S_contig9793.21444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9793:4579..5445+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCAGGTGGTGGTCAGCCGCTCCGTCATCGACCAGTACGGCACCATGGA ATGGGAAGTGACCTTCACGATGAACCCGGGGGTAACTCCTACTGGTGCAG GGGACGTGGAAGTGCTCTCCGTGGCTCAGAACCTGACGGGACTGTCGGAA CACGCCACCCAGCCCGTCGTCACGGAAACCCAGCAGGGATCCACGGGACT GTCGGGCACCTTCGCGCTGGACTACAACGACGTCGGGGGCTCGAGGGAGG TCAAGTTTGACGAAGACGCGGACCGCATGAGGCGCAAGCTGGAAGAGATG AGCACCATCTCGGACGTCTACATCGACCTCGAGAAGTACCCTTCCAGCGA CAGCGGGGGCTGGGGAGGCACCGCCGTCGAGGACGGCACCGCGGGGGGAT ACGTCTGGAAGCTCCGCTTCCTGACGGTTCCCGGCACGTACAACGGGGAG ACTTTCCCCGCCGGGACCGGTAACGTGGACGCCATTGTCCCGTCGATCTC CTCCCTGTCCGGGTCTTCCGCCAGCGTCGTCACCACCACCGTCACCGAAG GCGCGGATGAGATGGGCGGCGGCTTCGCGCTCGCGTTCGCCGGAGAGTCG ACCGAAAAGCTCCTGTACACCGCGGACGAGACGGCGGTCGAGGCCGTCTT CGAGGACCTGTCCAACGTCGGCGACGTTTCAGTGTCGTTCGACCCTTACA CCCCTACCCGGATCGCGAACACCACCGTCACAGTGGCCAGAGACTCGTCC ACTGCGGTGGTGACTTCTACGCGAGACCTTCGCAACTTCCTGTCGCCGGG CGTTGTCATCCGCATCGGCGGGGAAGACGCGTCTGCGGGCGGCACGCTGG TGGGAACCAACGGCGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9793:4579..5445+

>mRNA_Ecto-sp13_S_contig9793.21444.1 ID=mRNA_Ecto-sp13_S_contig9793.21444.1|Name=mRNA_Ecto-sp13_S_contig9793.21444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=867bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9793:4579..5445+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGCCAGGTGGTGGTCAGCCGCTCCGTCATCGACCAGTACGGCACCATGGA
ATGGGAAGTGACCTTCACGATGAACCCGGGGGTAACTCCTACTGGTGCAG
GGGACGTGGAAGTGCTCTCCGTGGCTCAGAACCTGACGGGACTGTCGGAA
CACGCCACCCAGCCCGTCGTCACGGAAACCCAGCAGGGATCCACGGGACT
GTCGGGCACCTTCGCGCTGGACTACAACGACGTCGGGGGCTCGAGGGAGG
TCAAGTTTGACGAAGACGCGGACCGCATGAGGCGCAAGCTGGAAGAGATG
AGCACCATCTCGGACGTCTACATCGACCTCGAGAAGTACCCTTCCAGCGA
CAGCGGGGGCTGGGGAGGCACCGCCGTCGAGGACGGCACCGCGGGGGGAT
ACGTCTGGAAGCTCCGCTTCCTGACGGTTCCCGGCACGTACAACGGGGAG
ACTTTCCCCGCCGGGACCGGTAACGTGGACGCCATTGTCCCGTCGATCTC
CTCCCTGTCCGGGTCTTCCGCCAGCGTCGTCACCACCACCGTCACCGAAG
GCGCGGATGAGATGGGCGGCGGCTTCGCGCTCGCGTTCGCCGGAGAGTCG
ACCGAAAAGCTCCTGTACACCGCGGACGAGACGGCGGTCGAGGCCGTCTT
CGAGGACCTGTCCAACGTCGGCGACGTTTCAGTGTCGTTCGACCCTTACA
CCCCTACCCGGATCGCGAACACCACCGTCACAGTGGCCAGAGACTCGTCC
ACTGCGGTGGTGACTTCTACGCGAGACCTTCGCAACTTCCTGTCGCCGGG
CGTTGTCATCCGCATCGGCGGGGAAGACGCGTCTGCGGGCGGCACGCTGG
TGGGAACCAACGGCGAG
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