prot_Ecto-sp13_S_contig979.21442.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig979.21442.1
Unique Nameprot_Ecto-sp13_S_contig979.21442.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length758
Homology
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: D8LL67_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL67_ECTSI)

HSP 1 Score: 1133 bits (2931), Expect = 0.000e+0
Identity = 637/757 (84.15%), Postives = 652/757 (86.13%), Query Frame = 0
Query:    1 MKSALVRLGVIALLGGNCDAMRGGTEELDVENPGAVVLGETFVLEWESIGQNYFDVELFTDSSDCGGSAEPVDLCGKSAGCGDSKGDLNVVIPTSAGSGEHSILLSLHDDPDVKGCTGPFIASEEELAGPEGAYLEVFALNVEDAVISGTEVTVEWDYSDGKGSTQGRFDIDLYSGAGCSGSRVADICGKTNSQGELIGCPDTAGDYDVVIPTDTMSGEYSIKVGVFGATSPSGCSPVFSVVATNSGVIDTGAVGIDTVVPSPWDGYAFPKPACDPTIPVTVRYAASSQRVYFEHTDGTTGGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMGKLKEATTTSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEISVKNDACFVSGSDLGDELGTPC 757
            MKSAL+RLGVIALLGG CDAM GGTEELDVENPGAVVLGETFVL WES+GQNYFDVELFTDSSDCGGSAEPVDLCGK AGCGDSKGDLNVVIPTSAGSGEHSILLSLHD PDVKGCTGPFIASEEELAGPEGAYL+VFAL+VEDAVI+GTEVTVEWDYSDG+GSTQGRFDI+LYSGAGCSGSRVADICGKTNSQG+LIGCPDTAGDYDVVIPTD MSGEYSIKVGVFGATSPSGCSPVFSVVATNSGVIDTGAVG DTVVPSPWDGYAFPKPACDPTIPVTVRYAAS+QRVYFEHTDGTTGGCATLSDVLAERVEKNGTVK             IMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDY+ VDDDADPRSYI C             G+A+ TR   R                                                             YGHLGGLW GNLMHDNEWYGFDPHDDSDYLTIHNNLVWNN XXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGT+VQNNVFSTWHMGKLKEA TT++ XXXXXXXXXXXXXXXXXXXXXXXXXXX VEISVKNDACFVSGSDLGDELGTPC
Sbjct:    1 MKSALIRLGVIALLGGKCDAMGGGTEELDVENPGAVVLGETFVLAWESVGQNYFDVELFTDSSDCGGSAEPVDLCGKPAGCGDSKGDLNVVIPTSAGSGEHSILLSLHDYPDVKGCTGPFIASEEELAGPEGAYLDVFALDVEDAVITGTEVTVEWDYSDGEGSTQGRFDIELYSGAGCSGSRVADICGKTNSQGDLIGCPDTAGDYDVVIPTDIMSGEYSIKVGVFGATSPSGCSPVFSVVATNSGVIDTGAVGTDTVVPSPWDGYAFPKPACDPTIPVTVRYAASTQRVYFEHTDGTTGGCATLSDVLAERVEKNGTVK-------------IMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYNSVDDDADPRSYIRC------------EGSAR-TRATPRSST---------------------------------------------------------RYGHLGGLWNGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNXXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTSVQNNVFSTWHMGKLKEADTTTITXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEISVKNDACFVSGSDLGDELGTPC 674          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 2.260e-137
Identity = 237/515 (46.02%), Postives = 294/515 (57.09%), Query Frame = 0
Query:  251 TGAVGIDTVVPSPWDGYAFPKPACDPTIPVTVRYAASSQRVYFEHTDGTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMG------KLKEATTTSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------VEISVKNDACFVSGSDLGDE 752
            T A   DT  P+        KP CD  I V++RYA +++R+Y E  DG T GGCATL  +   R  K      PLY +DP +G+    +   TG WL+  +LYV +G+TL+++G+  GGD D LR+ ST   + NLR HGGSLDF+ T + SWDT    P+          +D+ D RSYIS +SEI+TD  ETC GNAKNT GE RMDI  SEIG+LG+  +E+YGLTWKVRGFC DKSNPEIFD+V+ YG++ DS+IHHL +GLYTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V+NNG                         T+AGIFLHRSSD AIV GN++HD  D+GLA LESF+   S N  E  KYGVR+S+G  +NV   N  S+ S Y  +TY+GS+EPDV             QNNVFS           K+KEA  T                              T       E+ V ND+CF   SD G E
Sbjct:   24 TPAAAADTASPND----PISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGK-----APLYAVDPDSGDV---SETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPD----------EDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVS-------SGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYE 509          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 2.460e-135
Identity = 232/489 (47.44%), Postives = 287/489 (58.69%), Query Frame = 0
Query:  278 IPVTVRYAASSQRVYFEHTD-GTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMG------KLKEATTTSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXT------VEISVKNDACFVSGSDLGDE 752
            I V++RYA ++ R+Y E  D GTT GGC TL  +   R  K     GPLY +DP +G    +A   TG WL+  +LYV +G+TL+++GS +GGD D LR+ ST+  F NLR HGGSLDF+ T + SWDT    P+          +D+ D RSYIS ISEIITD  ETC GNAKNT GE RMDI  SEIG+LGY+ +E+YGLTWKVRGFC DKSNPE+FD+V+ YG+V DS+IHH+ +GLYTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V+NNG                         T+AGIFLHRSSD AIV GN++HD  D+GLA LESF+   S N  E  KYGVR S+G  +NV   NT S+ + Y  ++Y+G++EPDV             QNNVFS           K+KEA  T                              T       E+ V NDACF   +D G E
Sbjct:   42 IAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGK-----GPLYAVDPDSGNVSTSA---TGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPD----------EDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVS-------SGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYE 505          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 408 bits (1048), Expect = 1.210e-131
Identity = 207/433 (47.81%), Postives = 274/433 (63.28%), Query Frame = 0
Query:  270 PKPACDPTIPVTVRYAASSQRVYFEHTDGTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMGKLKEATTT 701
            PKP CD +I V+VRY A S R+Y E  +G T GGC TL  +  ++V+ +     PLY +DP +G+   +A   TG WL+  ++YV +G+TLQ+HG ++GGD D LR+ ST   F +LR +GGSLDFL T + +WDT    P+           D++D RSYIS +SE+ITD  +TC G AKN  GE RMDI  SE+ +LGY+G E YGLTWKVRGFC DK NPE+FD+V+ YG++ DS+IHH  +G+YTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N VWNNG                        S +AGIFLHRSSD+ IV GN++HD  D+GLA LESF+   S+N  E  KYGVRLS+G G N+   N  +  + +  F+Y+G+++P+V   +G       ++NN+        LKEA  T
Sbjct:    6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGS-----PLYAVDPKSGDVSRSA---TGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPD----------QDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVD-SGRSQDNVFMENNIIGGVESILLKEADGT 419          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 7.220e-128
Identity = 204/377 (54.11%), Postives = 249/377 (66.05%), Query Frame = 0
Query:  278 IPVTVRYAASSQRVYFEHTD-GTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSD 652
            I V++RYA S+ R+Y E  D GTT GGC TL  +   R  K     GPLY +DP +G    +A   TG WL+  +LYV +G+TL+++GS +GGD D LR+ ST+  F NLR HGGSLDF+ T + SWDT    P+          +D+ D RSYIS ISEIITD  ETC GNAKNT GE RMDI  SEIG+LGY+ +E+YGLTWKVRGFC DKSNPE+FD+V+ YG+V DS+IHH+ +GLYTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V+NNG                         T+AGIFLHRSSD AIV GN++HD  D+GLA LESF+   S N  E  KYGVR S+G  +NV   NT S+
Sbjct:   42 IAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGK-----GPLYAVDPDSGNVSTSA---TGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPD----------EDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISN 400          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 5.660e-122
Identity = 209/458 (45.63%), Postives = 280/458 (61.14%), Query Frame = 0
Query:  255 GIDTVVPSPWDGYAFPKPACDPTIPVTVRYAASSQRVYFEH-TDGTTGGCATLSDVLAERVEKNGT-VKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTD-TE------FFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMGKLKEATTTSV 703
            G DT  PSP      PKP C+ T  V++RY+A++ R+Y E   +G  GGC T+  +   R     T  K PLY +DPV+GE    +  +TG WL+E DLYV +G+TL++ G+ SGG  D LR+KST  TE      + NLR HGGSLDF  T +  WDT         +  YD+  D+ D RSYIS +SEI+ DP++TC GNAKNT GE RMDIV SE+G++G++ +E+YGLTWKVRGFC DKSNPE+FD+V+ YG++ DS +HH+ + +YTYGH  G W  N +H N  YG+DPHDDSD+LTIH+N+V++N                          T+AGIFLHRSSD A+V  NH +   D+G+A LES +   S N+ E  KYG+R+S+G  +N V  NT ++ S Y  +TY GS+  +V P TG         N V       KLKE+  T +
Sbjct:  100 GTDT--PSP--NTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEY---SDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDT--------TNNSYDM--DETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQP-TGRSQDNIFDSNTVVGGPQAIKLKESDGTRI 539          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 6.570e-119
Identity = 203/501 (40.52%), Postives = 283/501 (56.49%), Query Frame = 0
Query:  253 AVGIDTVVPSPWDGYAFPKPACDPTIPVTVRYAASSQRVYFEHTDGTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMGKLKEATTTSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVEISVKNDACFVSGSDLGDE 752
            A G DT  P+       PKP CD +I V++RY++  +R+Y E  D  T GGC TL     E++ ++   + PLY +D  +G+    +   TG WL+  +L+V +G+TL++HG+++GGD D LR+ ST   F NLR HGGSLDFL T + +WDT +  P+           D+ D RSY+S +SE+ITD S+TC G AKN  GE RMDI  SE+G+LGY+G+E+YGLTWKVRGFC DKSN ++F++V+ YG++ DS+IHH  +G+YTYGH  G W  N MHDN  YGFDPHDDSD+LTIH+N V++NG                        +++AGIFLHR                D+GLA +ESF+   S+N+ E  KYG+R S+G+G NV + N  S  + Y  ++Y+GS+ PDV   +G        +NN+       KL +A  T                                ++ V N A F + SD G E
Sbjct:   19 AAGKDTKSPNE----PIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTL-----EQIWEHQRGEAPLYAVDSKSGDI---SDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDR----------DEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVD-SGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSDYGFE 496          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 374 bits (959), Expect = 5.620e-118
Identity = 223/422 (52.84%), Postives = 278/422 (65.88%), Query Frame = 0
Query:  268 AFPKPACDPTIPVTVRYAASSQRVYFEHTDGTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFS 688
            A  KP+C  +  V++RY+ASS+R+Y E  DG T GGC TL     E + K+     PLY + P +G+    +S  TG WL+  DLYV +G+TLQ+HG+++GG+ + LR+ ST  +F NLR HGGSLDF+ T + +WDT  +   VR  G        +  RSYIS +SEIITD  E C G AK T GE RMDI  SE+ +LGY G+E+YGLTWKVRGFC D SNPE+FDEV+ YG++ DS+IHH  +G+YTYGH  G W  N MH N  YGFDPHDDSD+LTIH+N V    XXXXXXXXXXXXXXXXXXXXXX  S + GIFLHRSSD AIV  N      D+G+A +ESF+   SNN  E  KYGVRLS+G  +NV   N  SD S Y  +TY GS++P V             Q+N+FS
Sbjct:   33 AISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTL-----EEIWKDLDGSAPLYAVKPSSGDV---SSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDT--SKNKVRTDG--------SKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVD-------SGRSQDNIFS 429          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 370 bits (950), Expect = 1.110e-116
Identity = 199/403 (49.38%), Postives = 263/403 (65.26%), Query Frame = 0
Query:  268 AFPKPACDPTIPVTVRYAASSQRVYFEHTDGTT-GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDV 669
            A  KP+C  +  V++RY+ +S+R+Y E  DG T GGC TL D+  +    +G    PLY + P +G+    +S +TG WL+   LYV +G+TLQ+HG ++GG  D LR+ ST  +F NLR HGGSLDF+ T + +WDT  +   VR         DD+  RSYIS +SE+ITD  + C G AK   GE RMDI  SE+ +LGY+G+E+YGLTWKVRG C D SN E+FD V+ YG++ DS+IHH ++G+YTYGH  G W  N MH N  YGFDPHDDSD+LTIH+N V+NNG            XXXXXXXXXX  + + GIFLHRSSD AIV  N++HD  D+G+A +E+F+   SNN  E  KYG+R+S+G  +NV   N  +  S Y  +TY GS+ P V
Sbjct:   30 AIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDL---DGGA--PLYAVKPSSGDV---SSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDT--SKNKVRT--------DDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWV 414          
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 2.080e-116
Identity = 204/418 (48.80%), Postives = 268/418 (64.11%), Query Frame = 0
Query:  283 RYAASSQRVYFEHTDGTTGGCATLSDVLAER-VEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEADLYVTNGVTLQLHGSASGGDCDALRIKSTDTE-FFNLRGHGGSLDFLDTNITSWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKNTRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTYGDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIHNNLVWNNGXXXXXXXXXXXXXXXXXXXXXXXXSTAAGIFLHRSSDSAIVTGNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTFSDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMG-KLKE 697
            RYAASS      + +G   GC T++D+   R  E +G+ KGP+Y LD   G K+   S +T +WL+ A+LY+T G      G+++GGDC+ LRI+ST ++ F  +RGHGGSL F DT +TSWDT    PN      Y+      + RS+++C+SE +T   + C GNAKN  GECRMDI+ SEI +LGY+ +E+YG+TWKVRGFC D SNPE+F+  + YGD+  S+IHHL+YG Y+YGH GG+WT N MHDN  YGFDPHDDSDYLTI  N V+NN                         + AAGIFLHRSSD A V  N I +MQD+G+A LESFD     N+I   KYG+R+SLG+GNN VY N+F+D+S YG +TY GS+EPDV   +  RP G  +  N+     +G K+KE
Sbjct:  431 RYAASSGVAGRLYAEGE--GCFTMTDLYNFRGTENDGSSKGPVYMLDD-DGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDT----PNKEPQETYE------NGRSFLNCVSEKLT--GDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDV---SDGRPSGNVLALNLVEDCPIGVKIKE 830          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig979.21442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL67_ECTSI0.000e+084.15Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI2.260e-13746.02Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.460e-13547.44Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE1.210e-13147.81Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE5_ECTSI7.220e-12854.11Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LD45_ECTSI5.660e-12245.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE6.570e-11940.52Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAK2_9PHAE5.620e-11852.84Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A8CEP1_SACJA1.110e-11649.38Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D8LC73_ECTSI2.080e-11648.80Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 617..638
e-value: 280.0
score: 10.3
coord: 568..592
e-value: 92.0
score: 11.9
coord: 544..566
e-value: 11.0
score: 15.0
coord: 640..661
e-value: 1700.0
score: 5.7
coord: 594..616
e-value: 1500.0
score: 5.9
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 300..705
e-value: 1.3E-86
score: 293.0
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 563..729
e-value: 1.9E-12
score: 47.3
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 586..726
NoneNo IPR availablePANTHERPTHR22990:SF27coord: 586..726
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..757
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.614
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 343..713

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig979contigEcto-sp13_S_contig979:8330..18316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig979.21442.1mRNA_Ecto-sp13_S_contig979.21442.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig979 8208..19158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig979.21442.1 ID=prot_Ecto-sp13_S_contig979.21442.1|Name=mRNA_Ecto-sp13_S_contig979.21442.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=758bp
MKSALVRLGVIALLGGNCDAMRGGTEELDVENPGAVVLGETFVLEWESIG
QNYFDVELFTDSSDCGGSAEPVDLCGKSAGCGDSKGDLNVVIPTSAGSGE
HSILLSLHDDPDVKGCTGPFIASEEELAGPEGAYLEVFALNVEDAVISGT
EVTVEWDYSDGKGSTQGRFDIDLYSGAGCSGSRVADICGKTNSQGELIGC
PDTAGDYDVVIPTDTMSGEYSIKVGVFGATSPSGCSPVFSVVATNSGVID
TGAVGIDTVVPSPWDGYAFPKPACDPTIPVTVRYAASSQRVYFEHTDGTT
GGCATLSDVLAERVEKNGTVKGPLYPLDPVTGEKIMNASQVTGHWLIEAD
LYVTNGVTLQLHGSASGGDCDALRIKSTDTEFFNLRGHGGSLDFLDTNIT
SWDTDLAVPNVRASGDYDIVDDDADPRSYISCISEIITDPSETCLGNAKN
TRGECRMDIVRSEIGWLGYYGAEAYGLTWKVRGFCTDKSNPEIFDEVDTY
GDVIDSNIHHLFYGLYTYGHLGGLWTGNLMHDNEWYGFDPHDDSDYLTIH
NNLVWNNGKHGIIASKRCDHVSIQNNEVWNGGSTAAGIFLHRSSDSAIVT
GNHIHDMQDSGLATLESFDILFSNNLIERCKYGVRLSLGAGNNVVYGNTF
SDLSSYGFFTYIGSNEPDVPPYTGYRPFGTNVQNNVFSTWHMGKLKEATT
TSVTGNIFDNALVFEVDNSQETTMTGNTYPDTVEISVKNDACFVSGSDLG
DELGTPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence