prot_Ecto-sp13_S_contig97836.21434.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97836.21434.1
Unique Nameprot_Ecto-sp13_S_contig97836.21434.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length41
Homology
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BLAST of mRNA_Ecto-sp13_S_contig97836.21434.1 vs. uniprot
Match: D7G603_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G603_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 8.230e-10
Identity = 28/41 (68.29%), Postives = 35/41 (85.37%), Query Frame = 0 
Query:    1 GIEEVLNTLAERVIKRHPTVGYMRNTIQSYKDLRRMAPGRG 41
            GIE++L+TLAERV+ RHP+VGYMR TI  Y DL+R APG+G
Sbjct:  192 GIEDLLDTLAERVLVRHPSVGYMRMTIAVYLDLKRRAPGKG 232
[Close]
BLAST of mRNA_Ecto-sp13_S_contig97836.21434.1 vs. uniprot
Match: D7G5U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U4_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.280e-9
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    1 GIEEVLNTLAERVIKRHPTVGYMRNTIQSYKDLRRMAPGRG 41
            G E++L+TLAERV+ RHP+VGYMR TI  Y DL+R APG+G
Sbjct:  193 GTEDLLDTLAERVLVRHPSVGYMRMTIAVYLDLKRRAPGKG 233
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97836.21434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G603_ECTSI8.230e-1068.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5U4_ECTSI6.280e-965.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97836contigEcto-sp13_S_contig97836:104..226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97836.21434.1mRNA_Ecto-sp13_S_contig97836.21434.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97836 104..226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97836.21434.1 ID=prot_Ecto-sp13_S_contig97836.21434.1|Name=mRNA_Ecto-sp13_S_contig97836.21434.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=41bp
GIEEVLNTLAERVIKRHPTVGYMRNTIQSYKDLRRMAPGRG
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