prot_Ecto-sp13_S_contig978.21429.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig978.21429.1
Unique Nameprot_Ecto-sp13_S_contig978.21429.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length407
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig978.21429.1 vs. uniprot
Match: D7FS07_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS07_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 5.650e-179
Identity = 344/406 (84.73%), Postives = 357/406 (87.93%), Query Frame = 0 
Query:    1 MNLVFGSLCPLHEGNDRCPCRTLTTNASIWTAAELGDAARVRVSVAVKGRRPDSLDPHGYSPLHLAAQNGRLSVVLYLLEAGASPDGVPAEAGGCGAXXXXXXXXXXXXXXXXXXXXXXXXTNAADTSFGDMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGNSALDVLGLSAPILPDAVPGPSPHSEGSSGAAXXXXSEACSIVVLSSGAGKDWGGVREALERHGGRRRMHARVEGVGNAGGSGXXXHQGGAGSECIDHGARSSAREKESASVISAEPVVQAAGGELGVREPEGAALPGQDRSCTKKRSGVDAAAELVSTPSRGQLGAVSMAGIEGVVLERAVEKTPRSGGXXXXGVPCGECLLPKVVMVRTTCCRGLICKPCAREIXXXXXXXXXXRCRGD 406
            MNLVFGS CPLHEGNDRCPCRTLTTNASIWTAAELGD ARVRVSV VKGRRPDSLDPHGY PLHLAAQNGRLSVVLYLLEAGASPDGVPA+AGGCGA XXXXXXXXXXXXXXXXXXXXXXXTNAADTSF DMR XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGNSALDVL LS PILP+A+P  SPHSEGSSGA XXXX   CSIVVLSSGAG +WGGVREALERHGG RRM ARVEG+GNAG  G   HQG AGS CID GARSS  EKESASV+SAEPVVQ AG ELGVREPE AALPGQ+ SC+KKRSGVDAA EL STPS+GQLGAVS+AG E VVLERAV K+PRSGGXXXXGVPCGECLLPKVVMVRTTCC GLICKPCAR++          R RGD
Sbjct:    1 MNLVFGSFCPLHEGNDRCPCRTLTTNASIWTAAELGDVARVRVSVGVKGRRPDSLDPHGYCPLHLAAQNGRLSVVLYLLEAGASPDGVPADAGGCGATXXXXXXXXXXXXXXXXXXXXXXXTNAADTSFADMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGNSALDVLCLSVPILPEAMPARSPHSEGSSGAXXXXXXXXCSIVVLSSGAGNNWGGVREALERHGGLRRMRARVEGLGNAGSGGGGDHQGEAGSGCIDPGARSSECEKESASVLSAEPVVQTAGAELGVREPEVAALPGQETSCSKKRSGVDAA-ELASTPSQGQLGAVSVAGTERVVLERAVGKSPRSGGXXXXGVPCGECLLPKVVMVRTTCCGGLICKPCARDVCARRQSCRRCRYRGD 405
[Close]
BLAST of mRNA_Ecto-sp13_S_contig978.21429.1 vs. uniprot
Match: A0A7S2C3V0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3V0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.320e-7
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 0 
Query:    7 SLCPL-HEGNDRCPCRTLTTNASIWTAAELGDAARVRVSVAVKGRRPDSLDPHGYSPLHLAAQNGRLSVVLYLLEAGASP 85
            ++CP+ H  N  CPC+      SI+TAA  GD A VR  V  +    D  D + Y+ LH AAQ    S+V YLL+ GA P
Sbjct:    8 AVCPVDHTQNKNCPCKLNPLFFSIYTAASFGDLAMVREHVERRRIPVDKADTYRYTSLHYAAQKNFTSIVEYLLQRGALP 87
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig978.21429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS07_ECTSI5.650e-17984.73Chain A, Crystal Structure Of A Designed Full Cons... [more]
A0A7S2C3V0_9STRA5.320e-742.50Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 111..125
score: 37.87
coord: 59..74
score: 40.22
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 95..124
e-value: 0.0024
score: 27.1
coord: 131..160
e-value: 3.3E-5
score: 33.3
coord: 58..87
e-value: 1.7E-5
score: 34.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 58..90
score: 13.01
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 131..163
score: 12.663
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 95..127
score: 12.876
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 26..177
e-value: 5.4E-38
score: 132.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 31..171
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 95..160
e-value: 6.3E-11
score: 42.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 24..169
score: 33.978
NoneNo IPR availablePFAMPF13857Ank_5coord: 50..85
e-value: 2.9E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 51..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig978contigEcto-sp13_S_contig978:8807..12383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig978.21429.1mRNA_Ecto-sp13_S_contig978.21429.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig978 8381..12448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig978.21429.1 ID=prot_Ecto-sp13_S_contig978.21429.1|Name=mRNA_Ecto-sp13_S_contig978.21429.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=407bp
MNLVFGSLCPLHEGNDRCPCRTLTTNASIWTAAELGDAARVRVSVAVKGR
RPDSLDPHGYSPLHLAAQNGRLSVVLYLLEAGASPDGVPAEAGGCGATPL
HRAAFAGQLPCVRTLLAAGASTNAADTSFGDMRTPLHKAASQGHREVCVA
LMEAGADPNACDAAGNSALDVLGLSAPILPDAVPGPSPHSEGSSGAAGGG
GSEACSIVVLSSGAGKDWGGVREALERHGGRRRMHARVEGVGNAGGSGGG
GHQGGAGSECIDHGARSSAREKESASVISAEPVVQAAGGELGVREPEGAA
LPGQDRSCTKKRSGVDAAAELVSTPSRGQLGAVSMAGIEGVVLERAVEKT
PRSGGGGGGGVPCGECLLPKVVMVRTTCCRGLICKPCAREICARRQSCRR
CRCRGD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom