prot_Ecto-sp13_S_contig978.21428.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig978.21428.1
Unique Nameprot_Ecto-sp13_S_contig978.21428.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length448
Homology
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 721 bits (1862), Expect = 4.900e-253
Identity = 373/397 (93.95%), Postives = 377/397 (94.96%), Query Frame = 0
Query:    1 RWGHPRGKHGGQHGGRATASRIAPGERSGXXXXXXXXGKSESPPEVQQQDLYSLPVVMARMEASLVQRPDPVVMEAHAEAYVMDRQFARAVRVYLSLAEHQAASENGAR-----QTQHRAGGIGRAPEGPARGRQGSSATPSTTHGVGAGDGAGSEAQYGHVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEI 392
            RWGHPRGKHGGQHGGRATASRIAPGERSG        GKSESPPEVQQQDLYSLPVVMARMEASLVQRPDPVVMEAHAEAYVMDRQFARAVRVYLSLAEHQAASENGAR     + Q R GGIGRAP+GPARGRQGSSATPS THGVG GDGAGSEAQYGHVFRMIEQHSLFDAVQDRVLQ+IRLDRELTGELLLRHPEKFSVSSVV+QLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQ  I
Sbjct:  500 RWGHPRGKHGGQHGGRATASRIAPGERSGGAGGIAAAGKSESPPEVQQQDLYSLPVVMARMEASLVQRPDPVVMEAHAEAYVMDRQFARAVRVYLSLAEHQAASENGARLQQQQRQQQRTGGIGRAPQGPARGRQGSSATPSITHGVGTGDGAGSEAQYGHVFRMIEQHSLFDAVQDRVLQLIRLDRELTGELLLRHPEKFSVSSVVSQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVRI 896          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A6H5KFS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS4_9PHAE)

HSP 1 Score: 586 bits (1511), Expect = 5.840e-206
Identity = 301/317 (94.95%), Postives = 306/317 (96.53%), Query Frame = 0
Query:   78 AEAYVMDRQFARAVRVYLSLAEHQAASENGAR-QTQHRAGGIGRAPEGPARGRQGSSATPSTTHGVGAGDGAGSEAQYGHVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEID 393
            AEAYVMDRQFARAVRVYLSLAEHQAASENGAR Q Q R  GI RAP+GPARGRQGSSATPS THGVGAGDGAGSEAQY HVFRMIEQHSLFDAVQDRVLQ+IRLDRELTGELLLRHPEKFSVSSVVAQL GRRDLQHWYLGLLFDRSPEMYGAQEYAP+HALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQ  ++
Sbjct:    3 AEAYVMDRQFARAVRVYLSLAEHQAASENGARLQHQQRTDGIERAPQGPARGRQGSSATPSITHGVGAGDGAGSEAQYSHVFRMIEQHSLFDAVQDRVLQLIRLDRELTGELLLRHPEKFSVSSVVAQLNGRRDLQHWYLGLLFDRSPEMYGAQEYAPYHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVN 319          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 232 bits (591), Expect = 2.500e-63
Identity = 148/348 (42.53%), Postives = 178/348 (51.15%), Query Frame = 0
Query:  156 HVFRMIEQHSLFDAVQDRV-------------------------------------------------LQMIRLDRELTGELLLRHPEKFSVSSVVAQLKGRRDL------------QHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVY----------------------------------DVDLARLVAEIPKGMH-------------------IPGLRDKVVKIISDYHFQ 389
            HVF++IEQHSLF A+Q RV                                                 L++I+L +   G LL+RH +K   + VV QL+GRRDL            QHWYL LLF ++PE+Y   E+A FHALQVSL A+FAPPF+  RPP Y S FLRFLR + FAPLEAAL EC KRRPPL+DEM            AL++LLEEV    RAIEFV AHDKDLWYRLI++SL++E FL GLLDHAGVY                                  DVDLA L+  +P+GM                    I GLR+K+ KI SDY FQ
Sbjct: 1011 HVFKLIEQHSLFRAIQGRVRELVQLSQAGAIQIPSSSPRRHANAKILTSSAYSSILRIVLRAAVHFRVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGMRAXXXXXXXXXXXXXXXXXRIQGLREKLGKITSDYRFQ 1347          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 9.550e-55
Identity = 150/407 (36.86%), Postives = 203/407 (49.88%), Query Frame = 0
Query:   51 LYSLPVVMARMEASLVQRPDPVVMEAHAEAYVMDRQ--FARAVRVYLSLAEHQAASENGARQTQHRAGGIGRAPEGPARGRQGSSATPSTTHGVGAGDGAGSEAQYGHVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSSVVAQLK------------------GRRDLQH---------WYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPF----ERGRP-------------------------------PAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLAR-LVAEIPKGMHIPGLRDKVVKIISDYHFQTEI 392
            LY L  +  R+   + Q PDP++++AHA  Y++ RQ  FA ++ VY  L    +A+   AR+         R+P G A                 AGD    +  +  VF MIE+H+ FDA  +RV  ++++DR    +LL+R+ ++  V+SVV QL+                  G     H         WYL LLF R P+ Y   E+A FH LQV L A  APPF    ER                                  PAYTS  L FL  +    LE AL  C +R+PPLYDE+ YIL R+G  + AL +LL E+ SV RAIEFV+ HDK LW  L  HSL+   FL+GLL HAG Y+VDLAR LV +IP  M I GL+ K++ I++ Y F+  +
Sbjct:  771 LYDLEDLSKRVTNIVAQAPDPLLLQAHA--YLLQRQGRFAASLAVYWDLFRLLSAA---ARR---------RSPRGSA-----------------AGDMQTRKHLFSPVFSMIEEHNFFDAAAERVSLLVKMDRSKAADLLVRYVDRLPVASVVRQLQLEERGGEGEGAVPSTALAGHPQSSHASASPSLVLWYLDLLFRRLPDHYNHPEFAQFHVLQVELYAAAAPPFCPAPERSHTNAKDEDTVKIKDSGAHGSGENASDEEDGVAEPAYTSDLLSFLMWSNHVRLETALAACERRQPPLYDEIVYILSRIGHNKEALRLLLVEIRSVRRAIEFVDRHDKGLWRELTAHSLQHPRFLAGLLRHAGNYNVDLARSLVEDIPDAMRIRGLQPKLLNIVASYRFERTL 1146          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A1V9Y531_9STRA (Vacuolar protein sorting-associated protein 41 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y531_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.060e-44
Identity = 92/241 (38.17%), Postives = 147/241 (61.00%), Query Frame = 0
Query:  156 HVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRH--PEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEIDR 394
            H F++I +H L+DA+Q +V+ ++ +DR+    +L+     ++  V ++V QL+ +R+L H YL  LF      Y  + Y+  H LQV+L AEFAP              LRFL+ T F PLE A + C +R PPL+D M +ILGRMG  ++AL  ++ ++ +V +A+++V+ HD  LW  L+E SL  +  ++ LL HA  + +D  +++ +IP+ M IPGL+ KV +IIS+Y  QT + R
Sbjct:  577 HAFKLIVEHGLWDAIQHKVVNLMLIDRDGAMRMLVHQVKADELKVHAIVKQLEHKRELLHEYLHNLFVHRLVDYNTERYSSLHELQVALYAEFAP-----------QMLLRFLQTTSFVPLEKAYKFCSERSPPLWDAMVFILGRMGQHKKALDFIMTQLQNVQQAVQYVQDHDPGLWDYLLEISLAHKESMAELLAHACDHTIDPIKVIKKIPEDMEIPGLKAKVTQIISNYRIQTSLYR 806          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A067BPI1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPI1_SAPPC)

HSP 1 Score: 172 bits (435), Expect = 6.820e-43
Identity = 91/241 (37.76%), Postives = 148/241 (61.41%), Query Frame = 0
Query:  156 HVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRH--PEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEIDR 394
            H F++I +H+L+D+VQ++V+ ++ +DR+    +L+     ++  V ++V QL+ +R+L H YL  LF      Y   +Y+  H +QV+L AEFAP              LRFL+ + F PLE A + C +R PPL+D M +ILGRMG  ++AL  ++ ++ +V +AI+FVE HD  LW  LIE SL     +  LL++A  + +D  +++ +IP+ M I GL+DKV++II++Y  Q  + R
Sbjct:  567 HAFKLIVEHNLWDSVQNKVVNLMLIDRDAALRMLVHQIKSDELKVHAIVKQLEHKRELLHEYLHNLFVHRLVDYNTDKYSSLHEMQVALYAEFAP-----------HVLLRFLQTSSFVPLEKAYKFCSERSPPLWDAMVFILGRMGQHKKALDFIMTQLKNVKQAIQFVEDHDSGLWDYLIEISLSHTECMEELLEYACDHKIDPIKVMQKIPEDMEIAGLKDKVLQIITNYRIQMSLYR 796          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A5D6XHY4_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 7.900e-43
Identity = 92/237 (38.82%), Postives = 137/237 (57.81%), Query Frame = 0
Query:  156 HVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEI 392
            H F++I +H L+  VQ +V  ++++DR     +L+   E+  V  +V QL+  R+L H YL  LF   P  Y A+ YAP H  QV+L AEFAP F            LRFL+ + F PLE A   C +R PPL+D M YILGRMG  +RAL ++L ++  +  AI FV+ +D  LW  +I+ SL S+  +  LL  A  + +D  +L+ +IP+ M I  L+ K++ II++Y  Q  +
Sbjct:  650 HAFKLITEHQLWPLVQHKVANLMQIDRASAVRMLVAQTEQLKVPDIVKQLEHDRELLHEYLHELFVLRPSEYNAEAYAPLHEAQVALYAEFAPAF-----------LLRFLQTSNFVPLEKAYTYCSERNPPLWDAMIYILGRMGQHKRALDLILTQLHDIHHAIRFVQENDASLWDYVIDLSLTSQANVEQLLQFASQHKIDPIKLIRKIPEDMPIDNLKAKLLDIIANYRIQQNL 875          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: F0XVF2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF2_AURAN)

HSP 1 Score: 171 bits (432), Expect = 2.250e-42
Identity = 92/242 (38.02%), Postives = 131/242 (54.13%), Query Frame = 0
Query:  157 VFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSSVVAQLKGRRD---LQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAP---PFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEI 392
            VF ++E   L++ V+DRV  +     E   +LL++H ++F +  V  QL    D    + WYL   F R P++Y + ++   H     L A   P       G    Y S  LRFLR + F PL  A   C  +  PLYDEM ++LG+ G T  AL +LL+++GSV RA+ FVEAHD+ LW  LI H+L+   FL  LLD AG   +D+  L+ +IP+G  +PGLRDK+  +  D      I
Sbjct:  592 VFDLVEAQRLYEDVRDRVATLRAFSEERAADLLVKHVDEFPLGDVDDQLAREEDGGAARLWYLRTCFARLPDLYASADHRARHGDHARLYARLGPVPDAASAGPRADYDSEMLRFLRWSSFVPLTEAYDACAAQEAPLYDEMVWVLGKTGKTAEALALLLDKIGSVKRAVRFVEAHDRSLWSTLIRHALRDARFLGELLDDAGSSSLDVGALLHQIPEGTRVPGLRDKLANVFQDRRHDAAI 833          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A485LHE2_9STRA (Aste57867_21416 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHE2_9STRA)

HSP 1 Score: 169 bits (429), Expect = 4.460e-42
Identity = 89/239 (37.24%), Postives = 150/239 (62.76%), Query Frame = 0
Query:  156 HVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRH--PEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEI 392
            H F++I +H+L+ ++Q++V+ ++ +DRE    +L+     ++  VS++V QL+ +R+L H YL  LF      Y  + YA  H LQVSL AEFAP +            L+FL+ + F PLE A + C +R PPL+D M +ILGRMG  ++AL  ++ ++ +V +AI+FV+ +D +LW  LIE SL ++ ++  LL++A  + +D  +++ +IP+ M I GL+ KV +II++Y  Q  +
Sbjct:  597 HAFKLIVEHNLWASIQNKVVNLMMIDRESALRMLVHQIKSDQLKVSAIVKQLEHKRELLHEYLHNLFVHRLADYNTESYASLHELQVSLYAEFAPNY-----------LLKFLQTSAFVPLERAYKFCSERSPPLWDAMIFILGRMGQHKKALDFIMTQLQNVKQAIQFVQDNDDELWDYLIEISLTNKEYIEELLEYACDHKIDPIKVMRKIPEDMEIAGLKTKVQQIIANYRIQLSL 824          
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Match: A0A1S3HQA4_LINUN (Vacuolar protein sorting-associated protein 41 homolog n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HQA4_LINUN)

HSP 1 Score: 168 bits (426), Expect = 5.490e-42
Identity = 97/241 (40.25%), Postives = 149/241 (61.83%), Query Frame = 0
Query:  153 QYGHVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSSVVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAH-DKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEI 392
            Q+  VF++I +H+LFD++ D+++ +++ +RE   E+ L + +K  +  VV QL+   +L H YL  LF +   +   QE   FHALQV L AE+             S  L FLR + + PL+ AL EC +R+  LY EM ++LGRMG+T++AL ++  E+G V +AIEF + H D+DLW  LI+ S+    F+ GLL++ G + VD   L+ +I +GM IPGLRD +VKI+ DY+ Q  +
Sbjct:  443 QHPEVFQLIHKHNLFDSIADKIVMLMKFNREKAVEMFLDNMDKVPIKEVVHQLEKTPELLHVYLDRLFQKDHHI--GQE---FHALQVKLYAEYD-----------RSKLLSFLRSSNYYPLQKALEECQQRQ--LYPEMVFLLGRMGNTKQALMLITRELGDVSQAIEFCKEHNDQDLWDDLIDFSIGKPLFIKGLLNNIGTH-VDPIILIKKIREGMEIPGLRDSLVKILHDYNLQMSL 664          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig978.21428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS06_ECTSI4.900e-25393.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KFS4_9PHAE5.840e-20694.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBT2_9STRA2.500e-6342.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TUN1_9STRA9.550e-5536.86Vacuolar protein sorting-associated protein 41 n=2... [more]
A0A1V9Y531_9STRA6.060e-4438.17Vacuolar protein sorting-associated protein 41 n=1... [more]
A0A067BPI1_SAPPC6.820e-4337.76Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A5D6XHY4_9STRA7.900e-4338.82RING-type domain-containing protein n=1 Tax=Pythiu... [more]
F0XVF2_AURAN2.250e-4238.02Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A485LHE2_9STRA4.460e-4237.24Aste57867_21416 protein n=1 Tax=Aphanomyces stella... [more]
A0A1S3HQA4_LINUN5.490e-4240.25Vacuolar protein sorting-associated protein 41 hom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPFAMPF00637Clathrincoord: 263..344
e-value: 1.9E-7
score: 31.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 151..392
e-value: 2.0E-8
score: 35.5
NoneNo IPR availablePANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 50..392
NoneNo IPR availablePANTHERPTHR12616:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOGcoord: 50..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig978contigEcto-sp13_S_contig978:512..6348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig978.21428.1mRNA_Ecto-sp13_S_contig978.21428.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig978 512..6348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig978.21428.1 ID=prot_Ecto-sp13_S_contig978.21428.1|Name=mRNA_Ecto-sp13_S_contig978.21428.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=448bp
RWGHPRGKHGGQHGGRATASRIAPGERSGGGGGIAAAGKSESPPEVQQQD
LYSLPVVMARMEASLVQRPDPVVMEAHAEAYVMDRQFARAVRVYLSLAEH
QAASENGARQTQHRAGGIGRAPEGPARGRQGSSATPSTTHGVGAGDGAGS
EAQYGHVFRMIEQHSLFDAVQDRVLQMIRLDRELTGELLLRHPEKFSVSS
VVAQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPF
ERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMG
DTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLD
HAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQTEIDRWRRGGG
GGEGGHANPLALGSSSSAAAATAAGWAQGEAGGRSCFLVGICSTSTA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000547Clathrin_H-chain/VPS_repeat
IPR011990TPR-like_helical_dom_sf