mRNA_Ecto-sp13_S_contig12595.2142.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: D7FNX5_ECTSI (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX5_ECTSI) HSP 1 Score: 247 bits (630), Expect = 9.720e-76 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLSSNW 360
DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAA LVDNRQRKRVLLLSSNW
Sbjct: 265 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAARLVDNRQRKRVLLLSSNW 384
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A835Z1B7_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B7_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.970e-35 Identity = 58/113 (51.33%), Postives = 85/113 (75.22%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRV 339
D +G PT+ LR + H+PG +D +F RY ++L+E+GR+ WG+G+ Q N++VDRV +G+ NQDP LL+ MLP+FRD YP+I+ R Y+AP++W+F +W +A LVD RQR RV
Sbjct: 387 DSEGLPTLCLRGVHHHPGVLDPSKFMRYLVYLVEKGRREWGVGSHYQANMVVDRVDSGLHNQDPELLKVMLPIFRDNYPEIIHRAYIAPSNWVFMLIWAVARVLVDARQRARV 499
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A7S0LX31_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LX31_9CRYP) HSP 1 Score: 111 bits (277), Expect = 7.000e-24 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLSSNWCG 366
DK GRP ++ RS H PG ID + F RY + E+ R + LG Q +IVDR+G+G+KNQDP LL+ +LPV + YP+ V YVAP S +F +W I L+D+ R+R LL ++ G
Sbjct: 330 DKLGRPVLLYRSALHKPGKIDPQRFTRYVIQQTERARLQYRLGTEVQSIVIVDRIGSGLKNQDPALLKVLLPVIVEHYPEYVGFAYVAPISVVFNVIWKIIQLLLDDAARQRFFLLQGDYTG 451
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A7S0F3A4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F3A4_9CRYP) HSP 1 Score: 110 bits (276), Expect = 2.430e-23 Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLSSN 357
DK GRP +V R+ H PG ID + + RY + +EQGR+ +GLG Q ++VDR+G+G+KNQDP LL+ +LP F +P IV Y+AP + +F FVW + + L+D + V LL +
Sbjct: 598 DKAGRPILVYRAATHVPGKIDEKLYCRYVVQRVEQGRKKYGLGKNVQACVVVDRIGSGLKNQDPALLRELLPCFTTHFPGIVGNIYIAPVNNVFFFVWSLLSLLLDEDTKNSVKLLGKS 716
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A7S4ULM1_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4ULM1_GUITH) HSP 1 Score: 108 bits (271), Expect = 5.570e-23 Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLL 348
DK GRP +V R+ +H PG I+ + + RY + +EQGR+ +GLG Q ++VDR+G+G+KNQDP LL+ +LP F +P IV Y+AP + +F FVW + + L+D + V LL
Sbjct: 340 DKAGRPILVYRAASHVPGKINEKLYCRYVVQRVEQGRKKYGLGKNVQACVVVDRIGSGLKNQDPALLRELLPCFTTHFPGIVGNIYIAPVNNVFFFVWSLLSLLLDEDTKNSVKLL 455
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A7S4PA60_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA60_GUITH) HSP 1 Score: 108 bits (271), Expect = 1.110e-22 Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLL 348
DK GRP +V R+ +H PG I+ + + RY + +EQGR+ +GLG Q ++VDR+G+G+KNQDP LL+ +LP F +P IV Y+AP + +F FVW + + L+D + V LL
Sbjct: 603 DKAGRPILVYRAASHVPGKINEKLYCRYVVQRVEQGRKKYGLGKNVQACVVVDRIGSGLKNQDPALLRELLPCFTTHFPGIVGNIYIAPVNNVFFFVWSLLSLLLDEDTKNSVKLL 718
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: K8YSK8_NANGC (Sec14p-like phosphatidylinositol transfer family protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSK8_NANGC) HSP 1 Score: 107 bits (267), Expect = 3.980e-22 Identity = 45/118 (38.14%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLSS 354
D++G P +V R+ H PG +EE+ Y L+L+E+GR+L+GLG Q++ +VDR G G+ NQDP ++ +++PV + YP+ + + ++AP + IF+F+W + ++ RV LLS+
Sbjct: 627 DREGDPVLVFRTALHQPGRFTTEEYLAYLLYLIEKGRELYGLGQRTQISFLVDRKGGGLANQDPKVVLALVPVLQAHYPECLKKTFIAPVNVIFQFIWKVFTLVLAKDTANRVRLLSA 744
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A4D9D201_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D201_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.260e-22 Identity = 45/118 (38.14%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLSS 354
D++G P +V R+ H PG +EE+ Y L+L+E+GR+L+GLG Q++ +VDR G G+ NQDP ++ +++PV + YP+ + + ++AP + IF+F+W + ++ RV LLS+
Sbjct: 681 DREGDPVLVFRTALHQPGRFTTEEYLAYLLYLIEKGRELYGLGQRTQISFLVDRKGGGLANQDPKVVLALVPVLQAHYPECLKKTFIAPVNVIFQFIWKVFTLVLAKDTADRVRLLSA 798
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A7S2F3B8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3B8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.640e-17 Identity = 36/92 (39.13%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 76 QRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLLQSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLS 351
+ Y+++L+E R WG+G ++VDRVG+G+KN DPLL+ LP + YP+IV R ++ P +W+F +W I L+ R R+R L++
Sbjct: 2 EEYWVYLMEYARNAWGVGECMGFELLVDRVGSGLKNNDPLLVSYALPRAQSHYPEIVERVFIGPINWVFWLIWRICRLLLQERVRQRFELIT 93
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Match: A0A4D9D2X2_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2X2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.770e-9 Identity = 37/120 (30.83%), Postives = 64/120 (53.33%), Query Frame = 1
Query: 1 DKDGRPTMVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAGIKNQDPLLL---QSMLPVFRDAYPDIVFRCYVAPTSWIFRFVWIIAAPLVDNRQRKRVLLLS 351
DK GRP + + H A +++ R + LLE+ A + +I+D+ G G KN D L ++ + ++ YP+ + CY+ TSWIFR +W I +P +D + R++V +L+
Sbjct: 190 DKQGRPCIYALNRNHIIDAENNDSNLRTIVNLLEKTTVESTRTADGFIAVIIDQEGVGRKNMDTNLFVGKPGLVQILQEYYPERLGSCYILHTSWIFRLMWAIISPFLDEKTRRKVHVLA 309 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12595.2142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12595.2142.1 >prot_Ecto-sp13_S_contig12595.2142.1 ID=prot_Ecto-sp13_S_contig12595.2142.1|Name=mRNA_Ecto-sp13_S_contig12595.2142.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp MVLRSIAHNPGAIDSEEFQRYFLFLLEQGRQLWGLGAVQQLNIIVDRVGAback to top mRNA from alignment at Ecto-sp13_S_contig12595:1369..3108+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12595.2142.1 ID=mRNA_Ecto-sp13_S_contig12595.2142.1|Name=mRNA_Ecto-sp13_S_contig12595.2142.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1740bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12595:1369..3108+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12595:1369..3108+ >mRNA_Ecto-sp13_S_contig12595.2142.1 ID=mRNA_Ecto-sp13_S_contig12595.2142.1|Name=mRNA_Ecto-sp13_S_contig12595.2142.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12595:1369..3108+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |