prot_Ecto-sp13_S_contig97686.21419.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97686.21419.1
Unique Nameprot_Ecto-sp13_S_contig97686.21419.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length85
Homology
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BLAST of mRNA_Ecto-sp13_S_contig97686.21419.1 vs. uniprot
Match: A0A6H5K2A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A3_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.200e-40
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0 
Query:    1 MPYSLRFALAPCKTFVHNMPPVVTVGYGIRDAAKYGWVGLHSLDTTFFSRARFDPRLLEHVLGTDSGHSAVQRTLNHCHSFFQNA 85
            M Y+LRFALA CKTFVHNMPPVV VG GIRDAAKYG VGLHSLDTTFFS ARF PRLLEHVLG DS H AVQ+TL+HCHSFFQNA
Sbjct:  485 MSYALRFALARCKTFVHNMPPVVVVGCGIRDAAKYGRVGLHSLDTTFFSHARFGPRLLEHVLGADSSHGAVQKTLDHCHSFFQNA 569
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BLAST of mRNA_Ecto-sp13_S_contig97686.21419.1 vs. uniprot
Match: A0A6H5JH42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH42_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.850e-30
Identity = 56/67 (83.58%), Postives = 59/67 (88.06%), Query Frame = 0 
Query:   19 MPPVVTVGYGIRDAAKYGWVGLHSLDTTFFSRARFDPRLLEHVLGTDSGHSAVQRTLNHCHSFFQNA 85
            MPPV+ VG GIRDAAKYG VGLH LDTTFFS ARFD RLL+H LG DSGHSAV+RTLNHCHSFFQNA
Sbjct:    1 MPPVIIVGCGIRDAAKYGRVGLHLLDTTFFSHARFDARLLKHELGADSGHSAVRRTLNHCHSFFQNA 67
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BLAST of mRNA_Ecto-sp13_S_contig97686.21419.1 vs. uniprot
Match: D8LJ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ27_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 5.110e-25
Identity = 51/68 (75.00%), Postives = 54/68 (79.41%), Query Frame = 0 
Query:   18 NMPPVVTVGYGIRDAAKYGWVGLHSLDTTFFSRARFDPRLLEHVLGTDSGHSAVQRTLNHCHSFFQNA 85
             +P   T+G    DAAKYG VGLHSLDTTFFS ARF PRLLEHVLG DS H AVQRTL+HCHSFFQNA
Sbjct:  270 KIPVEATLGANFWDAAKYGRVGLHSLDTTFFSHARFSPRLLEHVLGADSSHGAVQRTLDHCHSFFQNA 337
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97686.21419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K2A3_9PHAE1.200e-4084.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH42_9PHAE2.850e-3083.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ27_ECTSI5.110e-2575.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97686contigEcto-sp13_S_contig97686:133..387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97686.21419.1mRNA_Ecto-sp13_S_contig97686.21419.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97686 41..387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97686.21419.1 ID=prot_Ecto-sp13_S_contig97686.21419.1|Name=mRNA_Ecto-sp13_S_contig97686.21419.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=85bp
MPYSLRFALAPCKTFVHNMPPVVTVGYGIRDAAKYGWVGLHSLDTTFFSR
ARFDPRLLEHVLGTDSGHSAVQRTLNHCHSFFQNA
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