mRNA_Ecto-sp13_S_contig9767.21418.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: D7G3K6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K6_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 5.610e-138 Identity = 252/322 (78.26%), Postives = 264/322 (81.99%), Query Frame = 1
Query: 1 MNATRTLRATTAAGRGSARRWRYISAAWPQTGTVMASRRAASTGVGIARTRLRTVAPP-EGSKGSALAXXXXXXXXXXXXXXXXXN-SFGGGSTSVPGCSSADGVDDPYEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYF-------WQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFERGSLRVRGLTRGSSRELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALETLTEEVEDMRVV 939
M+ATRTL A TAAGRGSARRW ISAAWPQTGTVMASRRAASTGVGI RTRLRT APP EGSKGSALAXXXXXXXXXXXXXXXXX SFGGGSTSV GCSSADGVDDPYEPGQAVGVGIKAEMWKTKHPNLTILET+EDSPVL L++ +R + + A+L L+ N+ A F GVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFERGSL+VR LTRGSSRELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVED+NVTLVSVVISKDALE LTEE EDMRVV
Sbjct: 1 MSATRTLHAATAAGRGSARRWHCISAAWPQTGTVMASRRAASTGVGIVRTRLRTAAPPNEGSKGSALAXXXXXXXXXXXXXXXXXXXSFGGGSTSVAGCSSADGVDDPYEPGQAVGVGIKAEMWKTKHPNLTILETIEDSPVLG-LMSVVRNVETDG--------GAFLSAANRLMRQLLDFADMGFPNDDEAVFATPARVMMAGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFERGSLQVRCLTRGSSRELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDENVTLVSVVISKDALEALTEEAEDMRVV 313
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A8K1CMT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT7_PYTOL) HSP 1 Score: 76.6 bits (187), Expect = 2.670e-12 Identity = 57/214 (26.64%), Postives = 101/214 (47.20%), Query Frame = 1
Query: 319 YEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFER--GSLRVRGLTRGSSR----ELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALETLTEEVEDMRVVS 942
Y G+A+G G++ E WK KH N+ +L+ + L++L R + N ++ ++ L+ L + V + +GV+ EDDV VC I++ E L+ P FE G + + +G +R LP D+ G ++LLL P + + + L QAGVE++ +T+V++V +A + + D R+V+
Sbjct: 34 YVSGEALGRGVRLEYWKAKHENVVVLDLESE---LIQLGMTRIRDRENEGKRFIHDANSVLRAAIDLAITELPNDEEAVVVTPRGHKAEGVVFEDDVKVCGIAVGSNVEVQKSLLSVLEGTLP-FESALGDVLIAETAKGDARVVKANLPEDLDGYEVLLLVPDFNALEKISKTIHLLRQAGVEEEKLTVVTLVTCPEAADKFCQTFGDARLVT 243
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: K3X231_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X231_GLOUD) HSP 1 Score: 75.1 bits (183), Expect = 8.990e-12 Identity = 53/213 (24.88%), Postives = 101/213 (47.42%), Query Frame = 1
Query: 319 YEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFER-GSLRVRGLTRGSSR----ELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALETLTEEVEDMRVVS 942
Y G+A+G G++ E+WK KH N+ +L+ + L++L R N+ Q ++ L+ L + V + +GV+ EDDV V IS+ + E L+ P + G + V + +G + LP D+ G ++LLL P + + + + L Q GV+++ +T+V++V +A ++ + + R+V+
Sbjct: 33 YASGEALGRGVRLELWKAKHENVVVLDFESE---LIQLGITKIRDYENAGAQFVHDANSVLRAAVDLALTELPNDEEAVVTTPRGHKCEGVVFEDDVKVVGISIAKKPEVQKGLQQVLETTLPFESKLGEIIVADVGKGDFKIVKASLPDDLDGHEVLLLCPDLAAIEQISKTIHLLRQQGVDEEKITVVTLVTCPEAADSFCQTFGEARLVT 242
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A3F2RDY9_9STRA (Ubiquitin thioesterase OTU1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDY9_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.020e-11 Identity = 59/211 (27.96%), Postives = 101/211 (47.87%), Query Frame = 1
Query: 328 GQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSL-LASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFER-GSLRVRGLTRGSSR----ELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALETLTEEVEDMRVVS 942
G+A+G G++ E+WK KH N+ +L + L++L R N + + L+ L L + A V Y +G+L EDDV VC IS+ ++ E L + P + G + V+GL +G + +LP D+ ++LLL P + V + L Q GVE++ +T+V++V A ++ + D R+V+
Sbjct: 38 GEALGRGVRLELWKAKHENVVVLGLESE---LIQLGMTRIRDYENDGAKFTHDANGVLRSTLDLALTELPNDEAV--VTTPRGYKAKGLLFEDDVKVCGISIAVKPEVQSGLSHVLRTSLPFDSKYGEILVQGLAKGGMKIAKAQLPDDIDDHEVLLLCPELASISQVDKVIHLLMQQGVEEEKITVVTLVTCPAAADSFCKAFGDARLVT 243
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A484EG38_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG38_BRELC) HSP 1 Score: 68.6 bits (166), Expect = 1.790e-9 Identity = 56/202 (27.72%), Postives = 91/202 (45.05%), Query Frame = 1
Query: 319 YEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFER--GSLRVR-----GLTRGSSRELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALE 903
Y G+A+G G++ E+WK +H N+ +L+ + L++L R N+ + +A L+ L S V Y GVL ED+V VC IS+ + E L P FE G + V+ G TR + LP ++ ++ LL P V + L+ G E+D +TLV++V +A++
Sbjct: 36 YTSGEALGRGVRRELWKAQHENVVVLDLESE---LIKLGMTRIRDYANAGAKFTHDANAVLRSTLDLALSELPSDDNAVVTTPRGYKVDGVLLEDNVKVCGISIAAKPEAQICLSRVLRTCLP-FEAKFGEILVQEVANGGNTRIAKTTLPDGLEQHEVFLLMPEFALISQVDKIIHLLKHHGAEEDKLTLVTLVTCPEAVD 233
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A0P1AV45_PLAHL (Armadillo/beta-Catenin/plakoglobin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV45_PLAHL) HSP 1 Score: 67.4 bits (163), Expect = 4.140e-9 Identity = 50/213 (23.47%), Postives = 94/213 (44.13%), Query Frame = 1
Query: 319 YEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFP-SFERGSLRVRGLTRGSSR----ELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALETLTEEVEDMRVVS 942
Y G+A+G G++ E+WK +H N+ +L+ + L++L R N+ Q + L+ L + V Y +G++ EDDV VC IS+ + + L P + G + V+ +G S P ++ ++LLL P + V + L G +++ +T+V++V +A + + D R+V+
Sbjct: 36 YTSGEALGRGVRLELWKAQHENVVVLDLESE---LIQLGMTRIRDYKNAGAQFAHDANGVLRSACELALAELPTDDEAVVTTPHGYKIEGLVFEDDVKVCGISIAVNPDAQKGLSQVLQTTLPYDAKYGEILVQDAAKGGSAIVKATFPEGLEDYEVLLLLPELASVSQVDKVIHLLMHHGAKEEKITVVTLVTCSEAADGFCKAFGDARLVT 245
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A0W8D6H8_PHYNI (Uracil phosphoribosyltransferase n=19 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D6H8_PHYNI) HSP 1 Score: 67.4 bits (163), Expect = 4.540e-9 Identity = 58/226 (25.66%), Postives = 102/226 (45.13%), Query Frame = 1
Query: 319 YEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFP-SFERGSLRVRGLTRGSSR----ELPRDMQGKQILLLAPV---VGYAQPVLAALER-----LEQA-----GVEDDNVTLVSVVISKDALETLTEEVEDMRVVS 942
Y G+A+G G++ E+WK +H N+ +L+ + L++L R N+ + + L+ L + V Y +G++ EDDV VC IS+ + E L + P + G + V+ +G ++ LP D+ G ++LLL P V V+ R LE A GVE+D +T+V++V + + + +D R+V+
Sbjct: 36 YASGEALGRGVRLELWKAQHENVVVLDLESE---LIQLGMTRIRDYENAGAKFTHDANGVLRSTLDLALTELPSDEESVVTTPRGYKAEGLMFEDDVKVCGISIAVNPEAQKGLAQVLRTSLPYDAKYGEILVQEDAKGGNKIAKATLPEDLDGHEVLLLLPELASVSQIDKVIHVRSRVCWFVLESANDTGQGVEEDKITVVTLVTCPEGADGFCKAFDDARLVT 258
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A5D6XUW6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUW6_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.270e-8 Identity = 58/222 (26.13%), Postives = 99/222 (44.59%), Query Frame = 1
Query: 292 SSADGVDDPYEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFER-GSLRVRGLTRGSSR----ELPRDMQGKQILLLAPVVGYAQPVLAALERLEQAGVEDDNVTLVSVVISKDALETLTEEVEDMRVVS 942
S+A Y G+A+G G++ E+WK KH N+ +L+ +E + + + F+ NS + +A + L +V T + C A V+ EDDV V +S+ E L P + G + V +G + LP D+ G +LLL P + V A L Q GV+++ +T+V++V +A + + D R+V+
Sbjct: 26 SAAHSEPRVYSSGEALGRGVRLELWKAKHENVVVLD-LESELIQLGMARFVH--DANSVLR-----AAVDLALTELPNDEEAVVTTPRGHRCEA-----VVFEDDVKVVGVSIAKTPEVNKSLQQVLVTTLPFESKVGEILVAETDKGDYKVVTVALPDDLDGCDVLLLVPDFAALEQVTKAFHLLRQQGVDEEKITVVTLVTCPEAADRFCQTFGDARLVT 234
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: G4Z1L4_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z1L4_PHYSP) HSP 1 Score: 58.9 bits (141), Expect = 2.450e-6 Identity = 45/170 (26.47%), Postives = 77/170 (45.29%), Query Frame = 1
Query: 319 YEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNNCTAYFWQGVLPEDDVNVCAISLYLENEPCGVFDMELDAAFPSFER-GSLRVRGLTRGSSR----ELPRDMQGKQILLLAPVVGYAQPV 813
Y G+A+G G++ E+WK +H N+ +L+ + L++L R N+ + + L+ L + V Y +G++ EDDV VC IS+ + E L + P + G + V+ L +G ++ LP D+ G +ILLL P + V
Sbjct: 36 YASGEALGRGVRLELWKAQHENVVVLDLESE---LIQLGMTRIRDYENAGAKFTHDANGVLRSTLDLALTELPNDEEAVVTTPRGYKVEGLVFEDDVKVCGISIAAKPEAQKGLSQVLRTSLPYDSKYGEVLVQQLPKGGNKITKATLPDDIDGHEILLLLPELASVSQV 202
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Match: A0A835ZEB9_9STRA (Uracil phosphoribosyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB9_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.560e-6 Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 1
Query: 310 DDPYEPGQAVGVGIKAEMWKTKHPNLTILETMEDSPVLVRLLTFLRRSQPNSKRQHFRRTSAYLQGVYSLLASYGSVRATRNVNN 564
D Y PG+AVG G+K E+WK KHP++T+L+TMEDSP L + + + R S +L L+A+ G + + ++
Sbjct: 122 DKVYSPGKAVGEGLKGEIWKAKHPDVTMLDTMEDSPALPITVVYSNDQSRWLLCRDSARVSQHLTDQTQLIAAQGPIAPSERASH 206 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9767.21418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9767.21418.1 >prot_Ecto-sp13_S_contig9767.21418.1 ID=prot_Ecto-sp13_S_contig9767.21418.1|Name=mRNA_Ecto-sp13_S_contig9767.21418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MNATRTLRATTAAGRGSARRWRYISAAWPQTGTVMASRRAASTGVGIARTback to top mRNA from alignment at Ecto-sp13_S_contig9767:20..3953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9767.21418.1 ID=mRNA_Ecto-sp13_S_contig9767.21418.1|Name=mRNA_Ecto-sp13_S_contig9767.21418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3934bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9767:20..3953- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9767:20..3953- >mRNA_Ecto-sp13_S_contig9767.21418.1 ID=mRNA_Ecto-sp13_S_contig9767.21418.1|Name=mRNA_Ecto-sp13_S_contig9767.21418.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9767:20..3953- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |