prot_Ecto-sp13_S_contig1259.2141.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1259.2141.1
Unique Nameprot_Ecto-sp13_S_contig1259.2141.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1088
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1259.2141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.60coord: 646..759
e-value: 1.9E-7
score: 33.2
NoneNo IPR availableGENE3D1.20.245.10coord: 762..1057
e-value: 8.7E-13
score: 50.1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..281
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 426..448
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 449..495
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 302..322
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 282..301
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 245..255
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 323..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 517..1087
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 496..516
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 300..322
NoneNo IPR availableTMHMMTMhelixcoord: 426..448
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 329..351
NoneNo IPR availableTMHMMTMhelixcoord: 496..518
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 673..803
e-value: 6.9E-6
score: 24.8
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 667..1087
score: 14.173
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 666..1032
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILY48484Lipoxigenasecoord: 661..1030

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1259contigEcto-sp13_S_contig1259:1665..17380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1259.2141.1mRNA_Ecto-sp13_S_contig1259.2141.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1259 801..17440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1259.2141.1 ID=prot_Ecto-sp13_S_contig1259.2141.1|Name=mRNA_Ecto-sp13_S_contig1259.2141.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1088bp
MASEGVAVLMSLHQPRPEVYKMMDTVGLMHGGNMVFWGERDDTLPFLETF
SQPWKESDVAAFGCDVEPAHRVLDILHSQGGGGADTIAARFNESKNGETL
AATIRASATVMKDYRGPSSAEGWFARRFLAGWKLTAHHTIGAARTWAAVT
AALLAGFVTVSPAFSGAVATGPGLALVLWVIAFQMGQAVAAFNSTGFTLY
LFVPYFDVLEGVLPLPVYIALVVVASIFHVLLAVLVAVIMFFTIGIQGPP
LLFPTYLAGVSLWACGLFGLVALVMGLETLLHSIFTDRNFHSIETTLRRA
QHPVYFMLLGLYYTFSGVLVTFENVPRGFLWVYYTNPATWFIKAVMTVFV
CDDSSCGEGASGQTDLETDYLNDILNLDKQVIMAFSSTGDGSTSPVLGLS
DSDGIGLSGATDQTLVDQLHLQDGSVASFLGIALATAVAPFAVAYVFLRL
HQASLRRRLPGPVQPKAAAPDEGQESAAEDDKTDGRQSGSRSMKRSLVLL
AGVAVTAISVMIPVVVLDTASTSAVNGFGFEPSLSTICPTCINGLVPPEE
LTLTSQSTVGFLLRTMFAIQATRATLLTIPRADHLYVPGSTVIANTSSFN
PREVTDFLDITPRIGFDFSELTGLGNDAQGLLLRAVFTTGNVLFYNVKTM
PDQNEFPATPSTNLAVHLADTYNTTLEEALADGRLYRNRFLEALDNLPDS
SLGGNEDYVMMNVRTLLYRTDAGELDTLALQLGRGAPLLVENAMDNHCWS
LAKALARHTIVLQVLFEHLGRIHLIGNGVFYISASQNLPVGHPVLGFLDP
HMHPLGVADVINTVTRPSSAVPFRDIEPGDMVLLTEAVSRTFNWTEHVNI
RNRLEAAGLDNVNDGLSLDMRPMLFLLHDAALEYAEGFVGLTYGDDSAVV
GDAALQAFVLGLCYEDYGNIQGLCWGGRHLYGHEHGYPDEPPVASREALS
NFLGEAVSGLFLTHSLSHSRALGPALFFPLAPTNIRKPRVVPTPESVCVE
QDLIDSFGDHRDWAKHMLFFAQLNTPLGGHITQFRGHYSAAAGGDSRAFE
KDELFDTFISRLEGPLQNFDIETGLGVWAQMGAWIYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
IPR000907LipOase
IPR036226LipOase_C_sf