prot_Ecto-sp13_S_contig97639.21414.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97639.21414.1
Unique Nameprot_Ecto-sp13_S_contig97639.21414.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length141
Homology
BLAST of mRNA_Ecto-sp13_S_contig97639.21414.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.640e-37
Identity = 91/144 (63.19%), Postives = 103/144 (71.53%), Query Frame = 0
Query:    1 VAALRFFKRRRRAAKSTNPDPPVPPLHGGDSLTYGRVEQHQKRQNGIHSPSPISGDSAGGNVTRGPXXXXXXXXXXXXX---SYARDDAHRHDAWSPAGSQQHAGIVAEKKNGEDDTPIQALFLAPAMGGLSKPRSEGNPKHTR 141
            +AAL FF  RRRAAKST+PDPP PP +G DSL +GR EQH++RQ  +HS SPI   SAGGNVTR PXXXXXXXX XXXX   SYA D+AHR  AW  + SQQH  I AE   GED T IQ+LF AP +G L  P S+G PK TR
Sbjct:  416 LAALGFFLHRRRAAKSTDPDPPAPPSNGLDSLEHGRGEQHRQRQQDLHSSSPIIAGSAGGNVTRCPXXXXXXXXQXXXXXXXSYAHDNAHRRGAWPASASQQHVVIAAETTLGEDGTTIQSLFPAPPVGTLPNPSSKGKPKRTR 559          
BLAST of mRNA_Ecto-sp13_S_contig97639.21414.1 vs. uniprot
Match: A0A6H5JC40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC40_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 3.950e-34
Identity = 78/141 (55.32%), Postives = 84/141 (59.57%), Query Frame = 0
Query:    1 VAALRFFKRRRRAAKSTNPDPPVPPLHGGDSLTYGRVEQHQKRQNGIHSPSPISGDSAGGNVTRGPXXXXXXXXXXXXXSYARDDAHRHDAWSPAGSQQHAGIVAEKKNGEDDTPIQALFLAPAMGGLSKPRSEGNPKHTR 141
            VA LRFF RRRRAAKST+PDPP PP +GGDSL Y RVEQHQ+RQN IHS SPI GDSAGGN TRGP                   AH+                       DDTPIQ+LFLAPAMG L KP SEGN + TR
Sbjct:   52 VAGLRFFLRRRRAAKSTDPDPPNPPSYGGDSLAYDRVEQHQQRQNDIHSSSPIIGDSAGGNDTRGPPPP----------------AHK-----------------------DDTPIQSLFLAPAMGALLKPSSEGNSERTR 153          
BLAST of mRNA_Ecto-sp13_S_contig97639.21414.1 vs. uniprot
Match: D7G7X9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X9_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 1.340e-33
Identity = 87/141 (61.70%), Postives = 92/141 (65.25%), Query Frame = 0
Query:    1 VAALRFFKRRRRAAKSTNPDPPVPPLHGGDSLTYGRVEQHQKRQNGIHSPSPISGDSAGGNVTRGPXXXXXXXXXXXXXSYARDDAHRHDAWSPAGSQQHAGIVAEKKNGEDDTPIQALFLAPAMGGLSKPRSEGNPKHTR 141
            VAAL FF RRRRAAKST+PDPP P  +G DSL YGRVEQHQ+RQN IHS SPI GDS GGNVTRG  XXXXXXXXXXXX                         AEK  G DDTP+Q+L  APAMG L KP SEG  K TR
Sbjct:  690 VAALGFFLRRRRAAKSTDPDPPAPASYGADSLEYGRVEQHQQRQNDIHSSSPIMGDSTGGNVTRGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEKTFGGDDTPVQSLSTAPAMGALPKPSSEGKSKSTR 830          
BLAST of mRNA_Ecto-sp13_S_contig97639.21414.1 vs. uniprot
Match: D7FLJ2_ECTSI (TKL family protein kinase protein kinase/ putative CTR1-like protein kinase/ leucine rich repeat pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ2_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 4.820e-24
Identity = 79/142 (55.63%), Postives = 85/142 (59.86%), Query Frame = 0
Query:    1 VAALRFFKRRRRAAKSTNPDPPVPPLHGGDSLTYGRVEQHQKRQNGIHSPSPISGDSAGGNVTRGPXXXXXXXXXXXXXSYARDDAHRHDAWSPAGSQQHAGIVAEKKNGEDDTPI-QALFLAPAMGGLSKPRSEGNPKHTR 141
            +AAL F  R RRAAKST+PDPP  P  GGDSL  G+ EQHQ+RQN  HS                 XXXXXXXXXXXXX      AHR  AWSPA SQQ+A I AE   GED TPI Q+LF A   G L  P SEG  K TR
Sbjct:  455 LAALGFCLRCRRAAKSTDPDPPAAPSDGGDSLECGQGEQHQQRQNDTHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHRRGAWSPAASQQYAVIAAETTLGEDGTPIRQSLFPATPTGALPNPSSEGKSKRTR 596          
BLAST of mRNA_Ecto-sp13_S_contig97639.21414.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 2.130e-18
Identity = 73/155 (47.10%), Postives = 85/155 (54.84%), Query Frame = 0
Query:    1 VAALRFFKRRRRAAKSTNPDPPVPPLHGGDSLTYGRVEQHQKRQNGIHSPSPISGDSAGGNVTRGPXXXXXXXXXXXXXSYARDDAHRHDAWS-----------------PAGSQQHAGIVAEKKNGEDDTPIQALFLAPAMGGLSKPRSEGNPK 138
            +AAL FF RRRR AKST PDP  P  + G+SL +G  EQHQ+RQ  +HS                 XXXXXXXXXXXXX  A D A +                      PA SQQHA +VAE   GED TPIQ+LF AP +G L  P+SE NP+
Sbjct:  242 LAALGFFLRRRRVAKSTGPDPSAPRYYAGESLKHGLGEQHQQRQQDMHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAHDGADQRXXXXXXXXXXXXXXXXXXXXXPAASQQHAAVVAETTFGEDCTPIQSLFPAPPVGAL--PKSEENPR 394          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97639.21414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LH32_ECTSI1.640e-3763.19Leucine rich repeat tyrosine kinase n=1 Tax=Ectoca... [more]
A0A6H5JC40_9PHAE3.950e-3455.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7X9_ECTSI1.340e-3361.70Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FLJ2_ECTSI4.820e-2455.63TKL family protein kinase protein kinase/ putative... [more]
D7FRQ5_ECTSI2.130e-1847.10Similar to CG1848-PA, isoform A/ leucine rich repe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97639contigEcto-sp13_S_contig97639:50..472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97639.21414.1mRNA_Ecto-sp13_S_contig97639.21414.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97639 50..474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97639.21414.1 ID=prot_Ecto-sp13_S_contig97639.21414.1|Name=mRNA_Ecto-sp13_S_contig97639.21414.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=141bp
VAALRFFKRRRRAAKSTNPDPPVPPLHGGDSLTYGRVEQHQKRQNGIHSP
SPISGDSAGGNVTRGPPPPAQQNFPPPPPSYARDDAHRHDAWSPAGSQQH
AGIVAEKKNGEDDTPIQALFLAPAMGGLSKPRSEGNPKHTR
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