mRNA_Ecto-sp13_S_contig9763.21413.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9763.21413.1
Unique NamemRNA_Ecto-sp13_S_contig9763.21413.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI)

HSP 1 Score: 857 bits (2213), Expect = 3.510e-311
Identity = 409/441 (92.74%), Postives = 417/441 (94.56%), Query Frame = 1 
Query:    1 FRGWWSEGTPQEEYEDSVFSLYTTKTLDADVSYTAIIDRMSGLKSSCGHPANHSAFYAWVDDTTTFYKMFGKVDWTIRETEEIPMSCYVAPTTLRFDPPLPQTMTHITVGFQPARDLVEGDNVTVNLKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVYRSNGIRAQCGMGENETASTISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            FRGWWSEGTP+EEYEDSVFSLYTTKTLDAD+SYTAIIDRMSGLKSSCGHPA+HSAFYAWVDDTTTFYKMFG+VDWTI ETE IPMSCYVAP TL FDPPLPQTMTHITVGFQPARDLVEGDNVTVNLKGFTSGEGNGTEGRDFL+GDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVYRSNGIRAQCGMGENET STISVVS+SDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLH PDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACER                YACPEDCSGNGACR+MREMGMMRTAEPLVNSST+ASSSSRGDSADGFEVVYGW SPEGTATWESRSVFGCVCDSSWEV L
Sbjct:   82 FRGWWSEGTPEEEYEDSVFSLYTTKTLDADISYTAIIDRMSGLKSSCGHPADHSAFYAWVDDTTTFYKMFGQVDWTIEETEAIPMSCYVAPATLTFDPPLPQTMTHITVGFQPARDLVEGDNVTVNLKGFTSGEGNGTEGRDFLHGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVYRSNGIRAQCGMGENETTSTISVVSSSDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHAPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACER----------------YACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSVFGCVCDSSWEVGL 506
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A6H5KP52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP52_9PHAE)

HSP 1 Score: 781 bits (2018), Expect = 1.410e-281
Identity = 390/466 (83.69%), Postives = 407/466 (87.34%), Query Frame = 1 
Query:    1 FRGWWSEGTPQEEYEDSVFSLYTTKTLDADVSYTAIIDRMSGLKSSCGHPANHSAFYAWVDDTTTFYKMFGKVDWTIRETEEIPMSCYVAPTTLRFDPPLPQTMTHITVGFQPARDLVEGDNVTVNLKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVYRSNGIRAQCGMGENETASTISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQ-GECDYC--RQRCDCPEGF---------GSPSELLHMPDVARDCSEMTCPSGVSWGPVLA-------------GSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            FRGWWSEGTP+EEYEDSVFSLYTTKTLDADVSYTAIIDRMSGLKSSCGHPANHSAFYAWVDDTTTFYKMFGKVDWTIRETEEIPMSCYVAP TL FDPPLPQTMTHITVGFQPARDLV GDNVTVNLKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAP+PAGELHEVTVYRSNGIRAQCGMGENET STISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQ G   +   R +  C E F         G    +L  P+  +D   +  P+     P+++              SPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHID+QPSVS+PKYACPEDCSGNGACR+MREMGMMRTAEPLVNSST+ASSSSRGDSADGFEVVYGW SPEGTATWESRS+FGCVCDSSWEV L
Sbjct:   26 FRGWWSEGTPEEEYEDSVFSLYTTKTLDADVSYTAIIDRMSGLKSSCGHPANHSAFYAWVDDTTTFYKMFGKVDWTIRETEEIPMSCYVAPATLTFDPPLPQTMTHITVGFQPARDLVAGDNVTVNLKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPVPAGELHEVTVYRSNGIRAQCGMGENETTSTISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQVGRAIHLSFRSKIVCDESFTMGVGRRKCGKRPAIL-QPN-GKDMGLVASPANSGSDPLVSFPFCRPSTAVAASRSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDMQPSVSQPKYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSMFGCVCDSSWEVGL 489
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A7S3XTV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTV6_HETAK)

HSP 1 Score: 197 bits (502), Expect = 1.930e-55
Identity = 128/334 (38.32%), Postives = 174/334 (52.10%), Query Frame = 1 
Query:  349 LVEGDNVTVNLKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQAL-APIPAGELHEVTVYRSNGIRAQCGMGENETASTISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPED----CSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWG-SPEGT---ATWESRSVFGCVCDSSWEVRL 1323
            + EGD VTVNL GFT+G  + T G D   G ++ A  S     +   W EG +V  E G+ +S LR+  L     AG+   + V RS GIRAQCG+        + V +A+     S   F  ++AVGPGCR L+YCS  G CDYC Q+C C EGFG+ +++  + D++ DCSE  CP+G ++G + A S        HA  ECS  G C R+ G CLC TG+ GRACER                + CP      CSG+G C  M+++     A PL N +T  ++           + Y WG   +GT   + W++    GCVCDSSWEV L
Sbjct:    1 MTEGDLVTVNLGGFTTGNLS-TNGSDLSMGAVVFA--SGYNPLFGGQWTEGEFVSQEMGFYNSTLRVTLLNTSYAAGDTVSIIVARSTGIRAQCGIDGATPHWWLKVEAAAAN--TSLTYFDTTEAVGPGCRHLSYCSDAGTCDYCLQKCTCYEGFGATTDIADI-DISLDCSEKVCPAGPAFGHLPASS-----TDGHAPRECSAAGACNRNTGECLCFTGWWGRACER----------------HECPSSEGIACSGHGRCFKMKDLAKFSDAMPLSNRNTSNAT-----------IEY-WGMDADGTLADSVWDAEMGSGCVCDSSWEVGL 295
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.810e-39
Identity = 87/256 (33.98%), Postives = 125/256 (48.83%), Query Frame = 1 
Query:  574 GELHEVTVYRSNGIRAQCGMGENETASTI-----SVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPD-VARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            G L+E  +YR NGI+  CG+GEN+    I     S+ +     W S      S   G GC  L+ C G+G CD+C+Q C C EG+G  ++ +     ++ DCSE  CP   ++G V   +     +++H +AECSN G C R+ G C C  G+ G AC+R++                CP DCSG+G C SM E+     A PL  + T                 YG+ +P    +W++ S+  CVCDS W V L
Sbjct:   10 GSLYEFIIYRQNGIKLYCGIGENDPDLKIRWGNSSLATGWFGEWMS---IQSSTRAGSGCTALSDCHGRGVCDFCKQTCVCYEGYGKDTDTITAGGTISVDCSERVCPYAKAFGDVPYST-----DSAHQLAECSNNGICERTSGSCQCFPGFEGDACQRRS----------------CPNDCSGHGQCLSMAELVNAAAAHPLTAADT----------------TYGFSAPVSAQSWDAESLQACVCDSRWTVGL 225
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A1V9YDS1_9STRA (Uncharacterized protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDS1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.830e-33
Identity = 77/205 (37.56%), Postives = 103/205 (50.24%), Query Frame = 1 
Query:  712 FSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHA-MAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            ++   G  C  LN C+G G C+   + C C  G+G+PS++      A DCS  TCP+G+SW  V  G+      T H+ +AECS+MGTC  + G C+C  GY+G ACER                  CP DCSG+GACRSMR +     A PL  ++T            GF           T TW+   +FGC+CDS+W V L
Sbjct:   17 YNPLGGDLCNALNDCNGHGFCNTLTKTCTCQIGWGAPSDISVF--KAADCSLRTCPAGLSWTSVPVGA-----STGHSVLAECSDMGTCNTATGECVCFPGYSGAACERAG----------------CPNDCSGHGACRSMRFLATQTNALPLSAATTYG----------GFAT---------TTTWDQDRIFGCICDSAWSVGL 179
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A5D6XZL0_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZL0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.480e-30
Identity = 72/207 (34.78%), Postives = 97/207 (46.86%), Query Frame = 1 
Query:  703 EFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            E +     G  C  L+ C+G G C    + C C EG+G+ S++      + DCS+  CPSG SW  +   +      ++H   ECS+ G C RS G C C  GY G AC+R                YACP  CSG+G C SM+ M  +  A PL  ++T A +                   E T TW+   +FGCVCDSSW+V L
Sbjct:   13 EASLGVPSGNLCSALSNCNGHGRCVTASKTCICFEGYGATSDITSY--KSPDCSKRVCPSGPSWAGIPTAA-----NSAHPRTECSDAGYCDRSSGQCRCFAGYDGAACQR----------------YACPNGCSGHGQCVSMQAMAELTNAAPLSAATTYAGA-------------------EATTTWDQNRIFGCVCDSSWDVGL 177
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A1V9ZX19_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX19_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.470e-29
Identity = 73/205 (35.61%), Postives = 97/205 (47.32%), Query Frame = 1 
Query:  712 FSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSH-AMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            ++   G  C +LN C+G G C+   + C C  G+G+P+E+      A DCS+ TCP G+SW  V   +      T+H  +AECS+MG C    G C C  G+ G ACER                  CP DCSG+G CRSMR +     A PL   S                  YG    + T TW+   +FGC+CDS+W V L
Sbjct:   21 YNAVGGDMCNQLNDCNGHGFCNTQTKVCTCQAGWGAPNEISLF--KAPDCSQRTCPVGLSWSSVPTSA-----STAHDVLAECSDMGICNPQTGECQCFDGFNGAACERAG----------------CPNDCSGHGICRSMRYLATYLNALPLSTLSNS---------------YYGL---QSTTTWDQDRIFGCICDSTWSVGL 184
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 9.960e-29
Identity = 68/197 (34.52%), Postives = 92/197 (46.70%), Query Frame = 1 
Query:  733 GCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL 1323
            GC   N+C+G G C+   + C C EG+G+ ++L      A DCS   CP+G +WG V  GS      ++H   ECS  G C R  G C C  G+ G ACER                  CP+DCS +G C +M+ + +   A PL N +T                   +   + T TW+   +FGCVCDS WEV L
Sbjct:   24 GCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLY--RAADCSARVCPAGKAWGDVPTGS-----LSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSG----------------CPDDCSDHGRCVNMKALAVTSDALPLSNVTT-------------------YSGEDDTVTWDEEMIFGCVCDSKWEVGL 178
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: A0A2D4C9C9_PYTIN (EGF-like domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9C9_PYTIN)

HSP 1 Score: 117 bits (294), Expect = 1.240e-24
Identity = 76/228 (33.33%), Postives = 103/228 (45.18%), Query Frame = 1 
Query:  712 FSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHM--PD-------VARDCSEM-----------TCPSGVSWGPVLAGSPRPDPETSH-AMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPK-----YACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEV 1317
            + +  G GC  LN C+G G C    + C C  G+G+P+++ +   PD       V    S +            CP+G+SW  +       D  T+H  +AECS+MG C RS G C C  G+ G AC+R     ++   S SR        ACP  CSGNG C SM+EM   + A PL   +T                   +   + T TW+   VFGCVCDS W V
Sbjct:  556 YDKISGEGCTFLNNCNGHGTCTLFSKTCICDTGWGAPTDVANYKSPDCTLRKGVVPSSPSSLCVNASHQDFIGVCPAGLSWTSIPI-----DETTAHNTLAECSDMGICDRSTGRCSCFPGFEGSACDRSK---LEFPVSYSRVDGEPLTLACPNACSGNGRCVSMKEMASAKNALPLSAPTT-------------------YSGAKATTTWDEDRVFGCVCDSGWAV 756
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BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Match: F0Y414_AURAN (EGF-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y414_AURAN)

HSP 1 Score: 109 bits (273), Expect = 1.660e-23
Identity = 65/201 (32.34%), Postives = 93/201 (46.27%), Query Frame = 1 
Query:  715 SQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHA-MAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSSRGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWE 1314
            + A+G GC+ L+YCSG G CD+C   C C +  G+            +C E+ CP G +W    AG P   P  +H  +  CS  G C  + G C C   ++G ACER+A    D              DCSG+G C +MR + M+  A PL +    + + S                   + TW++  +FGCVCDSSW+
Sbjct:   37 ADAIGDGCKALDYCSGNGACDHCTSTCSCVDRHGT----FDNSQTNFNCEEIKCPMGHAW----AGMPT-QPGFAHGDLVPCSGTGLCKGTSGTCTCFGDWSGPACERRACPGWDADFG----------DCSGHGTCATMRALAMLDEALPLTSRENRSYAHSNNQRP--------------SHTWDADRIFGCVCDSSWK 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9763.21413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCI8_ECTSI3.510e-31192.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KP52_9PHAE1.410e-28183.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XTV6_HETAK1.930e-5538.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AMA5_9STRA3.810e-3933.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9YDS1_9STRA6.830e-3337.56Uncharacterized protein n=2 Tax=Achlya hypogyna Ta... [more]
A0A5D6XZL0_9STRA2.480e-3034.78EGF-like domain-containing protein n=1 Tax=Pythium... [more]
A0A1V9ZX19_9STRA1.470e-2935.61Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
D7FYV5_ECTSI9.960e-2934.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4C9C9_PYTIN1.240e-2433.33EGF-like domain-containing protein n=1 Tax=Pythium... [more]
F0Y414_AURAN1.660e-2332.34EGF-like domain-containing protein n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9763contigEcto-sp13_S_contig9763:176..6152 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score857.8
Seed ortholog evalue2.2e-246
Seed eggNOG ortholog2880.D8LCI8
Model size1323
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.regulation of canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsKOG1225@1,KOG1225@2759
Cds size1323
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9763.21413.1prot_Ecto-sp13_S_contig9763.21413.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9763 176..6152 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464240.235283-CDS-Ecto-sp13_S_contig9763:175..4161681464240.235283-CDS-Ecto-sp13_S_contig9763:175..416Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 176..416 -
1681464240.259399-CDS-Ecto-sp13_S_contig9763:967..11381681464240.259399-CDS-Ecto-sp13_S_contig9763:967..1138Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 968..1138 -
1681464240.2722578-CDS-Ecto-sp13_S_contig9763:1377..15221681464240.2722578-CDS-Ecto-sp13_S_contig9763:1377..1522Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 1378..1522 -
1681464240.2839496-CDS-Ecto-sp13_S_contig9763:2059..22011681464240.2839496-CDS-Ecto-sp13_S_contig9763:2059..2201Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 2060..2201 -
1681464240.2942193-CDS-Ecto-sp13_S_contig9763:2546..26511681464240.2942193-CDS-Ecto-sp13_S_contig9763:2546..2651Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 2547..2651 -
1681464240.3046305-CDS-Ecto-sp13_S_contig9763:3617..37521681464240.3046305-CDS-Ecto-sp13_S_contig9763:3617..3752Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 3618..3752 -
1681464240.3151796-CDS-Ecto-sp13_S_contig9763:4405..45051681464240.3151796-CDS-Ecto-sp13_S_contig9763:4405..4505Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 4406..4505 -
1681464240.3960714-CDS-Ecto-sp13_S_contig9763:5103..52371681464240.3960714-CDS-Ecto-sp13_S_contig9763:5103..5237Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 5104..5237 -
1681464240.4105978-CDS-Ecto-sp13_S_contig9763:6002..61521681464240.4105978-CDS-Ecto-sp13_S_contig9763:6002..6152Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9763 6003..6152 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9763.21413.1

>prot_Ecto-sp13_S_contig9763.21413.1 ID=prot_Ecto-sp13_S_contig9763.21413.1|Name=mRNA_Ecto-sp13_S_contig9763.21413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=441bp
FRGWWSEGTPQEEYEDSVFSLYTTKTLDADVSYTAIIDRMSGLKSSCGHP
ANHSAFYAWVDDTTTFYKMFGKVDWTIRETEEIPMSCYVAPTTLRFDPPL
PQTMTHITVGFQPARDLVEGDNVTVNLKGFTSGEGNGTEGRDFLYGDLLL
AGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVY
RSNGIRAQCGMGENETASTISVVSASDPPWNSTGEFTFSQAVGPGCRELN
YCSGQGECDYCRQRCDCPEGFGSPSELLHMPDVARDCSEMTCPSGVSWGP
VLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIH
IDIQPSVSRPKYACPEDCSGNGACRSMREMGMMRTAEPLVNSSTDASSSS
RGDSADGFEVVYGWGSPEGTATWESRSVFGCVCDSSWEVRL
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mRNA from alignment at Ecto-sp13_S_contig9763:176..6152-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9763.21413.1 ID=mRNA_Ecto-sp13_S_contig9763.21413.1|Name=mRNA_Ecto-sp13_S_contig9763.21413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5977bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9763:176..6152- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCCGGGGGTGGTGGAGCGAGGGCACGCCACAAGAGGAGTACGAGGACAG
CGTCTTCAGCCTCTACACGACCAAGACCCTCGACGCCGACGTCAGCTACA
CGGCCATCATCGACCGTATGTCCGGCCTCAAGTCTAGCTGCGGCCATCCG
GTAAGTCTTGTTGCCGCAGAGCCCTGGCGCTCGAGGGATTCAGGACCAGG
ATGAGGGTGAGGGATGTAGACATCAGCGAGCGAACAGGCGGTTGTATACA
TTGGAGCAGAGCTCGCAGTTCTTGCCGATGCGGGTTCAACAGCGACATTT
TTATCTCTGTACTCCACGAGTCGTTCGCCCCCCTCTCCTGTAGGCCGGAG
CCAAACAGCCACCACCACTCGCCGCACAAGCTATTCGAGTGGGTGATGGA
GGTACGAAGGATAAGGTTTGGTGGGTAGCCCTGCCATTTCCCCGGGTCTT
AGTATCCTTCAAGTGAACCGCGCCGGCCATGGGTCGCACGGTCGGGTCGG
TTTGTCGTGCTTGCTCTCGCTGTCAACTCGAGGAGCGTTCAGCGGCTCGT
TCGGTTCAGCGGCCCCTTTTCCGCAAGCGCACCCCCGAAGGTTCCCCTCG
AAACGTGTACGCTCCCACACAATGCTTCAGCTCCCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTGCCTTCCGTTATGACCAAAATTCCAGCCCATTCTGC
GGCTTTGGATAGTTTGCTGCCCCAGCTGTGGTGGCGGTTGTCGCTAGCCC
CGTCGTCGCCGTGCGCTATCTTTGTCGCTGACTTACCGCCGTTCTCGTAA
CGTCCCGGCTCTTGTGGGGATGCGAGGTCAATCGACTGCGGCATGCACGG
CTATGAGTACAACCCCCCCCCGGGAACTGACACGCGCTCGCCCGGTTCCG
CGATAAAAACAACAGGCAAACCACTCGGCTTTCTACGCCTGGGTCGACGA
CACGACGACGTTCTACAAGATGTTCGGGAAGGTTGACTGGACCATCCGGG
AGACCGAAGAGATTCCGATGAGCTGCTACGTGGCCCCGACCACCCTTAGG
TGAGTTTGGACACCTGTTCGCCGCCGCCTGTGGGACACGCTCGCGTAAGA
GGGAGATATCGAGCCCTGTGAAGCACGAAGTTTATTGCAAACTGATCGTC
TTTGATGGGAGTTCTCCATCCTACCTCCTCCTTTCCGAACTAGGGCTTCG
GTTGGGGTTAGCTACAGTTTGGTACGGACGGCTCACCCCCCACCTTCCCA
AGCTAAAGGGTGTTGCTGACGACTACTCACGTCCTTATTCTCACCAACGA
CCGCCTCCGCTGTTAGTTGTTGCCATTTACCGTTGTGGTGGTGGTGGTGG
TAGTGGTTGTTGTTGTTGTTGTCAGCCTTAGTCCTTCTACTCGTCGATGC
TCGGTCGCAGAAAAAGGACACTCCAAGTATACTTCTCACGAGCGAGTTAG
ATAGCTGACTTGGGCTCAACAACAGCATTCTCTCCCTTCGCAACCACAAA
CCATGCCGGAGAGTCGCAAATCTCTTCAGAGACGCACAAGGCATCCCACA
TAGCCCATGCTTGGAGCAGCAACCCGGACGACGGTACGATCAATATCAGA
TCTTCCGATGCTTTTCGTGTGGTCGCGCTCTTTTGCGGAATCCTCAGGTT
CGATCCACCGCTTCCCCAGACAATGACCCACATCACCGTCGGCTTCCAGC
CAGCCAGAGACCTCGTAGAGGGGGATAACGTCACGGTGAACCTCAAGGTG
CGGCATCCCGTACCGGCATTCCATTCCGCGGAACAGCGACAGCGCCACGC
GTGCGGACCACGGTAGTTGAAGAGCGTGTTCTCCCCTTGCGCTGAATCCA
CGGCCTGAAAGGGTATAAAGAAAACAGGCGCGCAAAAAAAACACTAGCAG
GGGTGTGTCGGGGAGAAGAAAGAAACCGTAAGTGACTAATCCACGTCTTT
GGCACGATCCCAAATCACCGTTCCCATGGGCAAATATCAAAGCAAGCCAT
GAAAGAACACCCTACGGTTGACACGCAAGTCGCATGTTTTGTTGGTGGGC
TGGACTGTGTGCGGAGAAGAGAGGTTTGGTAGAGGCTACGGTGTGCTTGA
AGCGAAAAATTTCAATAGAGATCCCGCGCGGTGTTGGTTGTTTGTATACA
CACAGCTTCTGATAAGTCCGTGGTAACTGGTACAGGTTGGTAAAATTGAT
GGCATTCGGGCCAGGATGCCTTTTCGGGGAAAGCGGGCAGACGGAAAGCA
CATTAAACTACTGAGAGGGGACAGCTGCATGGTTCCCGTAGGTAATTGCG
GCACATACCTGTCGAAGACCTCTGTGACAATGGTGTATACCTGAGACAAA
ACGAGAGCGTTGATCGGGGTTGGGTCACAACAAATGTTGTCCCGGGGCAG
GGGTTCACTTCGGGGGAGGGGAACGGGACCGAGGGAAGAGATTTCCTGTA
CGGAGACCTGCTGCTTGCCGGCGAATCATCCAACGGAAGCACCTGGCTCG
CGTCCTGGGAAGAGGGCACCTACGTCGAGGGCGAGGTAAGAGAGAAGCCC
GTCGCTATGTCATTCTGAGGATTGCCCTAAACACAGATGAGGCCATGGCC
GAGGCCGTCTTTATTGGAAAGAGAGATCGGGAATAGCCGACGGCTTCGTC
GAGAATATCTTGACAAGAATCGAACTTTCTTGGGGCTGCAGCAGTGCCTT
CTTGCGGGGTGGTTTCGAGAGCCGAGTCCCGGCATTAACTTTTTGACACT
TCACACACCGTACTAAACCGCCGACACTGCCACCGTTCAAAAAGCCGCAC
CCAGAAACAGAAACAAAATTCCACGCGCCCCGACGAGGATACAGTAGTAC
CTTCCGCAACCACCCTACATGACCCATCTAGAACATCACTCCTGCAGTTT
CCGCCCGCACCGAAGACCTTGGCAGTTACATTTTTGTATGAATTTTAAAG
CCTCGAAAAACTGTAAGTTCAGGGACTTGGGCACCACTTGCGAGTTTCGG
CTAAGAACCCCATACGAACATTGACACGTATGTCGCGGCCGTTCGTAGCA
CAGACGTGCGTAGGAACGAAACGTATGAGTGCGGGCGCAAGCCGAGCTGC
AGATACACCGGCAGCGCTGTCGAGAGAACAGACCGCCATCGAGAGAACAG
ATGGGTCTACTCTACTCCCAGAGGAAGGGGACATTGCTCGATCCGAAGCC
ATCCATGCCCATCTGTTTCACAGCGGCAGCGTCCGTTTCAAACCAAGATT
CGTATGACAGATCACTTCAATCCTCGGAAATCTGTTGTATTTCGGGAGAG
AGAAGGGGGAGACTGAGAGGGTAGAGTCCACATCATGCTCCATGGGACAT
TCGATTCGACTTTTTCTGACTTCGTTTCTGACATCTGGATTCGTCTCATA
TCCGAGACTCACCTTTAAAACCACTGCCGCTGCTGTTGCCCCGCTCCCGA
CGCCTGCCTGCTTACGACCGCCCGTTGGCGGGGGAAAATACTGGAAAGCA
GCGGGGGTACGAAGACTCGATGCTTCGGCTTCAGGCCCTTGCGCCAATCC
CGGCGGGGGAGCTGCACGAGGTCACGGTCTACAGGAGCAACGGGATACGG
GCACAGGTTAGTGAAGACAGCGAAAAAAAAATACAGGCAGGCTTGAGGCC
AATTTCCCTACCAAAGGTTCATACATTTGAACTCATATCAGAATATTGTC
CGTTGCTGTCTCTGACCTTTCATTCTCTCCGAATGGCCGTCTCGCTCGGC
CACTCCTCGTGCCAAAAGTTCTGTCATCGTCCAGCGAACGCATTGGTGGC
GCAATAAGCACACTGTCCATTGGTCGATAAGTCAGCGTCAACATTACTTT
TTGAAGGTCTTCAGCGCTCACTCGCAACCAACACAGCGCTCGCTGCTCCT
TCGTCAACGGATCCCGTTTTCGTTTCTTGCTTGACCTGCCTATGTTAACA
GTGTGGGATGGGTGAGAACGAAACCGCTTCGACAATCTCGGTGGTATCGG
CCTCCGACCCTCCTTGGAACTCTACCGGGGAGTTCACATTTTCGCAGGCG
GTCGGGCCCGGCTGTCGAGAGCTCAACTACTGCTCCGGACAAGGTGCTTA
GCTGTTGTCAACGACCAGGAAACACAACTCACTCCCGATGACCCGTGATT
AGAGTGAAAATTCCTGTCGACGTTTGAAGGACTACGCACGCGCTGGTTGT
GGTGCTGTTTTCCTTGGGAGTGAATCTCATCCTTCGAAAGCAACGTGTGA
AAGCCACGCGCTTTTGGGGGCTAAATTCAACGGGGAGGTGCTCCGAGAAC
ATGCATCGTAGGGCCTCCTGTGTTGTTGTGTAGTTAGTGTGCGAAGGAGT
ATCGCACGGGAAAGCCACCGCCAAGAGACGGAAAAGAAGTCACGAACATA
TCAGAGAGAGTACGCCATTCGTGACGCACGTCGCTCCTTGGCCTTGGACT
TCTCCCCAACTGCCGGGGTTCCGCCCGTCACGGCTACACGCACGCTTACT
TGGCGTCTACTTATGTCAAGTATTCTCGTACTACTGCGTGTGCTGCATGT
GCAACCGTTTTTCTTCGATCTTCGGCCCGGCATTCTTCCCTTGCGCCCCT
CACCCGCCACCTGTTCGTTCGTTTTTACAGGAGAGTGTGACTACTGCCGC
CAAAGGTGCGACTGCCCCGAGGGGTTTGGATCCCCGTCCGAGTTGCTGCA
CATGCCGGACGTCGCTCGAGACTGCTCGGAGATGACCTGTCCCTCCGGGG
TGTCGTGGGGTCCAGTGCTTGCCGGGTGAGACGCTTCGCAACAATACGGT
AGTTGCCGCGCCATTCACCGTTCCTTCAGATCCAACATCGTTTGCGGTGA
GTTTTTCACTATGGACGTCGGAAGGCGGAAATGTGGCAAGCGTCCGGCAA
ACTTGCAGCCGAATTTAACGAAAATGGGACTCTTGCCTCTCCCGGAAACT
CGGGTTCGGACCCTCTTCTCTCACTCCTGTTCTGCCGACTCTCGACGGCC
GCGGGGACGAGCAGGTCACCCCGGCCTGATCCAGAGACTTCTCACGCGAT
GGCGGAGTGCTCCAACATGGGGACCTGTATCCGCAGCTTCGGGATATGCC
TGTGCGAAACAGGCTACGCGGGGCGGGCCTGCGAGAGGCAAGCCGACATT
CATATCGACATACAGCCAAGTGTTTCTCGACCAAAGTTCATGCTGACCAG
ACCCCAATGTGGAAGCTCAACAACGGTTTGTCCTACGAAGACACAGCTAG
CTACCACCACGACGTAGAGGCCGCTCGAGCGGCGCCGCAGTCTTAGTCAA
GCGACGCTGTACATTCGGTTGATATGTTCCACATACATCCTCAAGGTGGG
CGAGGCTGGCGAGGGCCTTGTCACCCAACGTAATGACGTTGGTAGAGTGC
TTCTCCAACCTTGGCACACTGCAGTTGCGAACAGAACCTCCAACCACTGC
ACATTCTTACACACCTGTTTTCCTGTGAACAAACAAAGCTTGTGTCGACC
TGGGGATGCGTTCGCCACCGCGATCTGTCTGTGTGTTTGAACCGATACCA
CGTTTTCCCCCAGGTAATATTTTTCGCGCGGCACACACAGCACGTCTAGA
GACTGTTTCACCCCGCCCGCCCTTTCCTGTCGAGGAGTCGTGGTCAATGG
TCTCATCGCTAAGGCATGCAAGTAAAACATGAGTACGCCCCCCCCCCCAA
CATCGCCCTCCCCGCTGACAATCCGCTAAATGTCAGGTACGCCTGTCCCG
AGGACTGCTCGGGGAACGGCGCGTGCCGCAGCATGCGTGAGATGGGGATG
ATGCGCACGGCGGAGCCCCTGGTAAACTCCTCCACCGACGCTTCTTCTTC
GAGTCGGGGGGACTCTGCGGATGGGTTCGAAGTGGTATACGGGTGGGGCT
CGCCAGAGGGGACGGCGACGTGGGAGTCCCGGTCTGTGTTTGGGTGCGTC
TGCGACTCTTCGTGGGAGGTGAGGTTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9763:176..6152-

>mRNA_Ecto-sp13_S_contig9763.21413.1 ID=mRNA_Ecto-sp13_S_contig9763.21413.1|Name=mRNA_Ecto-sp13_S_contig9763.21413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1323bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9763:176..6152- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCCGGGGGTGGTGGAGCGAGGGCACGCCACAAGAGGAGTACGAGGACAG
CGTCTTCAGCCTCTACACGACCAAGACCCTCGACGCCGACGTCAGCTACA
CGGCCATCATCGACCGTATGTCCGGCCTCAAGTCTAGCTGCGGCCATCCG
GCAAACCACTCGGCTTTCTACGCCTGGGTCGACGACACGACGACGTTCTA
CAAGATGTTCGGGAAGGTTGACTGGACCATCCGGGAGACCGAAGAGATTC
CGATGAGCTGCTACGTGGCCCCGACCACCCTTAGGTTCGATCCACCGCTT
CCCCAGACAATGACCCACATCACCGTCGGCTTCCAGCCAGCCAGAGACCT
CGTAGAGGGGGATAACGTCACGGTGAACCTCAAGGGGTTCACTTCGGGGG
AGGGGAACGGGACCGAGGGAAGAGATTTCCTGTACGGAGACCTGCTGCTT
GCCGGCGAATCATCCAACGGAAGCACCTGGCTCGCGTCCTGGGAAGAGGG
CACCTACGTCGAGGGCGAGCGGGGGTACGAAGACTCGATGCTTCGGCTTC
AGGCCCTTGCGCCAATCCCGGCGGGGGAGCTGCACGAGGTCACGGTCTAC
AGGAGCAACGGGATACGGGCACAGTGTGGGATGGGTGAGAACGAAACCGC
TTCGACAATCTCGGTGGTATCGGCCTCCGACCCTCCTTGGAACTCTACCG
GGGAGTTCACATTTTCGCAGGCGGTCGGGCCCGGCTGTCGAGAGCTCAAC
TACTGCTCCGGACAAGGAGAGTGTGACTACTGCCGCCAAAGGTGCGACTG
CCCCGAGGGGTTTGGATCCCCGTCCGAGTTGCTGCACATGCCGGACGTCG
CTCGAGACTGCTCGGAGATGACCTGTCCCTCCGGGGTGTCGTGGGGTCCA
GTGCTTGCCGGGTCACCCCGGCCTGATCCAGAGACTTCTCACGCGATGGC
GGAGTGCTCCAACATGGGGACCTGTATCCGCAGCTTCGGGATATGCCTGT
GCGAAACAGGCTACGCGGGGCGGGCCTGCGAGAGGCAAGCCGACATTCAT
ATCGACATACAGCCAAGTGTTTCTCGACCAAAGTACGCCTGTCCCGAGGA
CTGCTCGGGGAACGGCGCGTGCCGCAGCATGCGTGAGATGGGGATGATGC
GCACGGCGGAGCCCCTGGTAAACTCCTCCACCGACGCTTCTTCTTCGAGT
CGGGGGGACTCTGCGGATGGGTTCGAAGTGGTATACGGGTGGGGCTCGCC
AGAGGGGACGGCGACGTGGGAGTCCCGGTCTGTGTTTGGGTGCGTCTGCG
ACTCTTCGTGGGAGGTGAGGTTG
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