prot_Ecto-sp13_S_contig9760.21412.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9760.21412.1
Unique Nameprot_Ecto-sp13_S_contig9760.21412.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length216
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9760.21412.1 vs. uniprot
Match: D8LKG9_ECTSI (CxC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG9_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 1.500e-61
Identity = 170/180 (94.44%), Postives = 171/180 (95.00%), Query Frame = 0 
Query:    1 MGLTASAGYAASRRGGAGSWGVPRGGVAGVSANGVATAPAESTRRGTAAAERELQRPGGSRMQPAPRSPLTVCAGGFSSSGGHVPRRLGPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TTNGTEGQGHKGRCSVQRKPRIVLSRPPFFNFLRRR 176
            MGL ASAGYAASRRGGAGSWGVPRGGVAGVSANGVATAP ESTRRGTAA ERELQRPGGSRM PAPRSPLT+CAGGFSSSGGHVPRRLGPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     TNGTEGQGHKGRCSVQRKPRIVLSRPPFFNFLRRR
Sbjct:   86 MGLIASAGYAASRRGGAGSWGVPRGGVAGVSANGVATAPVESTRRGTAAVERELQRPGGSRMHPAPRSPLTICAGGFSSSGGHVPRRLGPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATNGTEGQGHKGRCSVQRKPRIVLSRPPFFNFLRRR 265
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9760.21412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKG9_ECTSI1.500e-6194.44CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9760contigEcto-sp13_S_contig9760:3119..4827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9760.21412.1mRNA_Ecto-sp13_S_contig9760.21412.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9760 1900..5879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9760.21412.1 ID=prot_Ecto-sp13_S_contig9760.21412.1|Name=mRNA_Ecto-sp13_S_contig9760.21412.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
MGLTASAGYAASRRGGAGSWGVPRGGVAGVSANGVATAPAESTRRGTAAA
ERELQRPGGSRMQPAPRSPLTVCAGGFSSSGGHVPRRLGPGAPRSPLMVS
AGGFSSSGGHVPRRLGPGAPRSPLMVSAGGFSSSGGHVPRTTNGTEGQGH
KGRCSVQRKPRIVLSRPPFFNFLRRRARLPRQQRQLPYPRQVQQRGGAPQ
LGASVPLRRSRYARR*
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