prot_Ecto-sp13_S_contig9760.21411.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9760.21411.1
Unique Nameprot_Ecto-sp13_S_contig9760.21411.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length325
Homology
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: D8LKG9_ECTSI (CxC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG9_ECTSI)

HSP 1 Score: 652 bits (1682), Expect = 1.300e-231
Identity = 317/324 (97.84%), Postives = 319/324 (98.46%), Query Frame = 0
Query:    1 MCSQGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLTETVWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPDVDMGVKEGDRDANTGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNVRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTLLQPRLDNMDWLEQNPMLASR 324
            MCS+GECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRL ET WFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPD DMGVKEGDRDAN GFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCN+RGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRT LQPRLDNMDWLEQNPMLASR
Sbjct:  320 MCSRGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLAETAWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPDGDMGVKEGDRDANMGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNLRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTFLQPRLDNMDWLEQNPMLASR 643          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 2.590e-91
Identity = 170/379 (44.85%), Postives = 221/379 (58.31%), Query Frame = 0
Query:    1 MCSQGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLTETVWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCK------------------------------------------------DTDGVEYEPDVDMGVKEGDRDANTGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQ----GAALRIVDVERKKCNTCNVRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTLLQPRLDNMDWLE---QNPMLASR 324
            +CS+ +CR++E L +AA   GDT SAL  RC HA+VV +AE +S  +P A A L+  G+FE+AL  VP GTFN++ V +M+ R  +A +EG+P+LVR+  T +FAVRDG  F R VIG WGHVK     +     +FQCK                                                D DG+E+ P+ +    EG    +TGFA   Q E+   FGE+MA  R I AVYKFP+ EP+LK GTYGR +IHVN   CTGC   Y+ LPD +A L+GQ    GA LR+V VERK C  C + GWAGD+   DGVFNYN N+V+ L +LY +R A  A TPVSTW+RT L+P LD++ WL+   +N  LASR
Sbjct:  317 LCSRPDCRRIEGLSSAAT--GDTASALPSRCAHAEVVIEAEKTSMPMPKADALLSA-GDFESALDKVPAGTFNQRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGS----KVFQCKASDGSPCSDGASRKSTGRCIHAAIVAVYIYDRYKSGVAGEELELERDGDMDGMEFGPEGEGWGAEGTIGGDTGFASYTQGENPLYFGEKMAQLRVITAVYKFPVAEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQRTNGGAELRVVKVERKGCKRCKLIGWAGDDIYADGVFNYNNNVVLALSLLYTIRRAVSADTPVSTWVRTFLRPLLDDLTWLDASNENRALASR 688          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5L2J5_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J5_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.550e-60
Identity = 100/208 (48.08%), Postives = 138/208 (66.35%), Query Frame = 0
Query:  122 HVKTRSDTTDGSG-HMFQCKDTDGVEYEPDVDMGVKEGDRDANTGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAA----LRIVDVERKKCNTCNVRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTLLQPRLDNMDWLEQNPMLASR 324
            ++  R  ++ G G  + +  + DG+E+  +  +  ++G    + G A +IQ +D  LF + MA  R I +VY+FP+ EP LK+GTYGR  IHVN  +CTGC  PY  LPD +AIL+GQGA     LR+V VERK+C  CN++GWAGDN  EDGVFNYN N+V+EL +LY +R A  AG PVSTW++  L+P LD+M+WL     LA+R
Sbjct:   48 YIYDRQVSSSGEGPELERDGEMDGMEFGSEWHVWGEDGANGDDMGLATSIQTQDPVLFEQHMAQLRMISSVYRFPVCEPALKNGTYGRQTIHVNACLCTGCGEPYLKLPDGEAILLGQGARRKTDLRVVTVERKECRRCNLKGWAGDNIYEDGVFNYNGNVVIELSILYAIRRAVSAGQPVSTWVKIFLEPLLDDMEWLSSEETLANR 255          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5KZ13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ13_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 3.860e-46
Identity = 104/256 (40.62%), Postives = 132/256 (51.56%), Query Frame = 0
Query:   47 IPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLTETVWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCK------------------------------------------------DTDGVEYEPDVDMGVKEGDRDANTGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQ----GAALRIVDVERK 250
            +P A A L+  G+F++AL  VP GTFN + V +M+ R  +A +EG+P+LVR+  T +FAVRDG  F R VIG WGHVK     +     +FQCK                                                D DG+E+ P+ +    E      TGFA   Q E+   FGE MA  R I AVYKFP+ EP+LK GTYGR +IHVN   CTGC   Y+ LPD +A L+GQ    GA LR+V VERK
Sbjct:    3 MPKADALLSA-GDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGS----KVFQCKASNGSPCSDSSSRKSTGRCVHAAIVAVYIYDRYKSGVAGEELELERDGDMDGMEFGPEGEGWGAEDTIGGCTGFASYTQHENPLYFGEEMAQHRVITAVYKFPVAEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQRTNGGAELRVVKVERK 253          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5KAW8_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW8_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 7.990e-40
Identity = 83/187 (44.39%), Postives = 116/187 (62.03%), Query Frame = 0
Query:  141 DTDGVEYEPDVDMGVKEGDRDANTGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQLKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERKKCNTCNVRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTLLQPRLDNMDWLEQ---NPMLASR 324
            D DG+E+ P+  +G  E     N  FA + +R D   F ++MA    I +VY  P++EP+ K+GTYGRD IH+N          +  L        G+ A LR+V +ERK+C  CN+RGWAGD+  EDGVFNYN N+V+ELR+LY +R AF + TP+STW++T L P  D++ WL+    N +LASR
Sbjct:  439 DMDGMEFGPEGCVGGDEHSTGNNVEFASSTERTDPIRFKQQMAQLTMICSVYNLPVDEPEFKEGTYGRDTIHING---------WMHLHRLRESAAGR-AELRVVKIERKECRGCNLRGWAGDDIYEDGVFNYN-NVVIELRLLYDIRRAFSSDTPISTWIKTFLAPLADSLAWLDASDANRILASR 614          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5KVV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV8_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.230e-30
Identity = 67/140 (47.86%), Postives = 87/140 (62.14%), Query Frame = 0
Query:    1 MCSQGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLTETVWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCK 140
            MCS+ EC+ +E L A A   GDT   L   C HADVV +A+ SS  +  ATA L    EF  AL +VP GTFN+  ++A++ R ARA+E G+PVLV+L +T +FAVRDG  F RN++GGW HVK       G     +CK
Sbjct:  107 MCSRPECKTIETLSAKAAAGGDTECVLRRHCAHADVVVQAKASSVPMAGATALLPSAEEFLRALDAVPTGTFNKHTMQAIRARVARAEELGIPVLVKLGDTKFFAVRDGPNFNRNIVGGWAHVKCEES---GGKTTLRCK 243          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5JZ41_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ41_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 5.210e-28
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 0
Query:  239 GAALRIVDVERKKCNTCNVRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTWLRTLLQPRLDNMDWL---EQNPMLASR 324
            GA LR+V VER +C  C ++GWAGD+F EDGVFNYN ++VVELRVLY++R A  AGTP STW++T L+P LDN++WL   E N  L SR
Sbjct:   10 GADLRMVKVERMECGRCKLKGWAGDDFQEDGVFNYNGSLVVELRVLYRIREAVCAGTPASTWVKTFLRPLLDNIEWLDASETNSWLGSR 98          
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 9.120e-28
Identity = 69/144 (47.92%), Postives = 96/144 (66.67%), Query Frame = 0
Query:    1 MCSQGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTATACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLTETVWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDG 144
            +CS+ +CR++E L +AA   GDT SAL  RC HA+VV +AE +S  +P A A L+  G+F++AL  VP GTFN + V +M+ R  +A +EG+P+LVR+  T +FAVRDG  F R VIG WGHVK     +     +FQCK ++G
Sbjct:  401 LCSRPDCRRIEGLSSAAT--GDTASALPSRCAHAEVVIEAERTSMPMPKADALLSA-GDFKSALDKVPAGTFNPRTVASMRARADQAAKEGLPLLVRVGNTKYFAVRDGQKFNRTVIGEWGHVKYDQRGS----KVFQCKASNG 537          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9760.21411.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LKG9_ECTSI1.300e-23197.84CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L6Z2_9PHAE2.590e-9144.85CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L2J5_9PHAE1.550e-6048.08CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KZ13_9PHAE3.860e-4640.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAW8_9PHAE7.990e-4044.39CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KVV8_9PHAE1.230e-3047.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ41_9PHAE5.210e-2860.67CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L8M0_9PHAE9.120e-2847.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040648HMG domain-containing protein 3, CxC4 like cysteine clusterPFAMPF18717CxC4coord: 218..304
e-value: 8.9E-10
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9760contigEcto-sp13_S_contig9760:910..3077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9760.21411.1mRNA_Ecto-sp13_S_contig9760.21411.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9760 910..5879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9760.21411.1 ID=prot_Ecto-sp13_S_contig9760.21411.1|Name=mRNA_Ecto-sp13_S_contig9760.21411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=325bp
MCSQGECRKVEQLRAAAGRQGDTNSALADRCQHADVVRKAEVSSQSIPTA
TACLNGDGEFENALASVPPGTFNEKMVRAMQQRYARAKEEGVPVLVRLTE
TVWFAVRDGVTFQRNVIGGWGHVKTRSDTTDGSGHMFQCKDTDGVEYEPD
VDMGVKEGDRDANTGFAWNIQREDEALFGERMAMARKIIAVYKFPIEEPQ
LKDGTYGRDKIHVNERICTGCRTPYEVLPDTDAILVGQGAALRIVDVERK
KCNTCNVRGWAGDNFLEDGVFNYNENIVVELRVLYQLRLAFRAGTPVSTW
LRTLLQPRLDNMDWLEQNPMLASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040648HMGXB3_CxC4