prot_Ecto-sp13_S_contig9721.21357.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9721.21357.1
Unique Nameprot_Ecto-sp13_S_contig9721.21357.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length313
Homology
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: A0A6H5KYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF7_9PHAE)

HSP 1 Score: 589 bits (1519), Expect = 5.260e-206
Identity = 293/313 (93.61%), Postives = 304/313 (97.12%), Query Frame = 0
Query:    1 LQQLLTTYRESKDAAQNLERILERMEEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVKPNHRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSRAACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRRLVCVHGFNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRAQGAQRAFEAIARSGPPPSTRVLQRKAKGFAHAGLWQEAEELFSLVVS 313
            L+QLLTTYRESKDAAQNLER++ERMEEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGV+PN RTASHMIVAHSRGCHD MYRAVEEMYAKGWQGSR ACL MIAVMG+R DYDGVL+TI RMREESKLPTEAAFVWAYRAAE+LGQVETAKQLFQHRAEAGLPPAEYVYVKMM ILMKAGKAEECLEYWR+LVCVHGFNGVVIHPETYNLAIKCTMVV NQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRA+GAQRAFEAIARSGPPPSTRVLQRKAKG AHAGLWQEAEELFSLV++
Sbjct:  159 LKQLLTTYRESKDAAQNLERVIERMEEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVEPNQRTASHMIVAHSRGCHDAMYRAVEEMYAKGWQGSRVACLGMIAVMGIRRDYDGVLYTIRRMREESKLPTEAAFVWAYRAAENLGQVETAKQLFQHRAEAGLPPAEYVYVKMMSILMKAGKAEECLEYWRQLVCVHGFNGVVIHPETYNLAIKCTMVVGNQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRARGAQRAFEAIARSGPPPSTRVLQRKAKGCAHAGLWQEAEELFSLVLA 471          
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: D8LG81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG81_ECTSI)

HSP 1 Score: 583 bits (1502), Expect = 1.920e-203
Identity = 289/313 (92.33%), Postives = 302/313 (96.49%), Query Frame = 0
Query:    1 LQQLLTTYRESKDAAQNLERILERMEEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVKPNHRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSRAACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRRLVCVHGFNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRAQGAQRAFEAIARSGPPPSTRVLQRKAKGFAHAGLWQEAEELFSLVVS 313
            L+QLL+TY ESKDAAQNLER+LERMEEDGLQPDVTTYNHILD HALLHNSEAAVAV+EEMLSRGV+PN RTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSR ACL MIAVMG R DYDGVL+TI RMREESKLPTEAAFVWAYRAAEHLGQVETAKQLF HRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWR+LVCVHG NGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTD+TY+AALGGLEKWFTPHRAQGAQRAFEAIARSGPPPS RVLQRKAKG+AHAGLWQEAE+LFSLV++
Sbjct:  159 LKQLLSTYGESKDAAQNLERVLERMEEDGLQPDVTTYNHILDFHALLHNSEAAVAVHEEMLSRGVEPNQRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSRTACLGMIAVMGFRRDYDGVLYTIRRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFHHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRQLVCVHGLNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDETYAAALGGLEKWFTPHRAQGAQRAFEAIARSGPPPSMRVLQRKAKGWAHAGLWQEAEQLFSLVLA 471          
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: A0A6H5KCB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCB7_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.850e-39
Identity = 99/301 (32.89%), Postives = 155/301 (51.50%), Query Frame = 0
Query:   11 SKDAAQNLERILERM-EEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVKPNHRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSRAACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRRLVCVHGFNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRAQGAQ--RAFEAIARSGPPPSTRVLQRKAKGFAHAGLWQEAEELF 308
            ++D  + ++R+ E+M E+DGL+P+  TY+H++  ++ +     AV + EEM  +G++P  +T S MIVAHS G  + M R  +EM  KGW  +R A  +MI  +    D++G+L T   M E  +  TEA  V A +AA ++G    A++L     +    P E +YV +M+ L  A + EECL  WR LV + G   V +   TYNLA+   +  +  DEME +L MM+ Q V PT  T+ + +   + W         +  + F  + R    P   V    A  +A    W +A   F
Sbjct:  158 TEDKLKEMKRLFEQMTEDDGLEPEALTYSHLIHGYSQVRKEGEAVRLLEEMAVKGLQPERKTLSSMIVAHSWGSIEDMRRVSKEMQEKGWTPTRRANSAMIGALWRAEDWEGILDTTRAMLEAGQTMTEAGLVVAIKAATNVGNAGFARELLLIHGKNKHRPQEQLYVLVMVALRNASQHEECLACWRELVLLDGLGDVKLDGRTYNLALMSAVKTERWDEMETILDMMQVQAVEPTVATWRSIV---DVWNAEETGDEGRLDQIFGEMVRREWRPDRAVRLHVAMAYARCRAWVKAMAWF 455          
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: D7FK78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK78_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.170e-38
Identity = 103/311 (33.12%), Postives = 160/311 (51.45%), Query Frame = 0
Query:    1 LQQLLTTYRESKDAAQNLERILERM-EEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVKPNHRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSRAACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRRLVCVHGFNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRAQGAQ--RAFEAIARSGPPPSTRVLQRKAKGFAHAGLWQEAEELF 308
            L+ + T  R ++D  + +ER+ E+M E+D L+P+  TY+H++  ++       AV + EEM  +G++P  +T S MIVAHS G  + M R   EM  KGW  ++ A  +MI  +    D++G+L T   M E  +  TEA  V A +AA + G    A++L     +    P E +YV +M+ L  A + EECL  WR LV + G   V ++ +TYNLA+   + ++  DEMEA+L MM+A+ V  T  T+ + +   + W         +  R F  I R    P   V    A  +A    W +A   F
Sbjct:   69 LKMIATDERMTEDKMKEMERLFEQMTEDDELEPEALTYSHLIYGYSQGRKEGEAVRLLEEMTVKGLQPERKTLSSMIVAHSWGSVEDMRRVSSEMREKGWTPTQRANSAMIGALRRAEDWEGILDTTRAMLENGQTMTEAGLVVAIKAAANAGNAGFARELLLTHGKNKHRPQEQLYVCVMVALRNACQHEECLACWRELVLLDGLGDVKLNGKTYNLALTSAVKMERWDEMEAILDMMQAKAVESTVATWRSMV---DVWSAEETGDEGRLDRIFGEIHRRQWRPDRAVGLHAAMAYARCRAWVKAMAWF 376          
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: D7FK81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK81_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.120e-28
Identity = 61/138 (44.20%), Postives = 92/138 (66.67%), Query Frame = 0
Query:  102 SRAACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRRLVCVHGFNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMME 239
            ++ A  SMI+ + +  D+ G+L TI+ M EE  +PTEA F   +  A  LG VE AK L + R++AG+PP +  +V +M+ L +AGK E+ LEYWRRLVCV G +G+ I PET+ LA++  + +   DE+EA++ MM+
Sbjct:    4 TKVAYQSMISGLRIGEDWQGILTTINEMLEEEVVPTEAGFAVGFMTARKLGDVEFAKMLLERRSQAGMPPRQDFFVNVMVTLGEAGKPEDFLEYWRRLVCVQGIDGLGIRPETFYLALRTAVKIKAWDEVEAIIGMMQ 141          
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: A0A368RWQ9_SETIT (Uncharacterized protein n=1 Tax=Setaria italica TaxID=4555 RepID=A0A368RWQ9_SETIT)

HSP 1 Score: 55.1 bits (131), Expect = 8.970e-5
Identity = 56/194 (28.87%), Postives = 82/194 (42.27%), Query Frame = 0
Query:   30 LQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVKPNHRT------ASHMIVAHSRGCHDTMY-------------RAVEEMYAKGWQGSRA-------------ACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEE 191
            L+ DV T+N ++  +A L +S AAV++Y++ML+ G+KPN  T      A   +VA  RG     Y              A+ +MYAK  Q   A             A   MI+  G+  +    L     M   S  P    F+    A  H G VE  ++LF    +  L P    Y  M+ +L K+G  +E
Sbjct:  313 LKGDVVTWNALISSYAHLGHSNAAVSLYDQMLTEGLKPNSATLITVISACANLVALERGEQVHSYVKEMGWESDVSISTALVDMYAKCGQLGIARRIFDSMLQRDVVAWNVMISGYGMHGEAKQALELFGEMERGSVKPNGVTFLAILSACCHSGFVEEGRKLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQE 506          
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Match: K3Y5D5_SETIT (Uncharacterized protein n=5 Tax=Paniceae TaxID=147428 RepID=K3Y5D5_SETIT)

HSP 1 Score: 55.1 bits (131), Expect = 9.820e-5
Identity = 56/194 (28.87%), Postives = 82/194 (42.27%), Query Frame = 0
Query:   30 LQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVKPNHRT------ASHMIVAHSRGCHDTMY-------------RAVEEMYAKGWQGSRA-------------ACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEE 191
            L+ DV T+N ++  +A L +S AAV++Y++ML+ G+KPN  T      A   +VA  RG     Y              A+ +MYAK  Q   A             A   MI+  G+  +    L     M   S  P    F+    A  H G VE  ++LF    +  L P    Y  M+ +L K+G  +E
Sbjct:  487 LKGDVVTWNALISSYAHLGHSNAAVSLYDQMLTEGLKPNSATLITVISACANLVALERGEQVHSYVKEMGWESDVSISTALVDMYAKCGQLGIARRIFDSMLQRDVVAWNVMISGYGMHGEAKQALELFGEMERGSVKPNGVTFLAILSACCHSGFVEEGRKLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQE 680          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9721.21357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KYF7_9PHAE5.260e-20693.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG81_ECTSI1.920e-20392.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCB7_9PHAE1.850e-3932.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK78_ECTSI1.170e-3833.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK81_ECTSI1.120e-2844.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A368RWQ9_SETIT8.970e-528.87Uncharacterized protein n=1 Tax=Setaria italica Ta... [more]
K3Y5D5_SETIT9.820e-528.87Uncharacterized protein n=5 Tax=Paniceae TaxID=147... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..28
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 207..309
coord: 3..199
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 135..313
e-value: 2.0E-16
score: 62.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..119
e-value: 2.1E-16
score: 61.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 36..68
e-value: 5.2E-6
score: 24.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 214..255
e-value: 0.002
score: 18.1
coord: 20..71
e-value: 3.2E-10
score: 39.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 293..309
e-value: 0.64
score: 10.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 102..136
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 246..283
score: 5.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..313
score: 5.711
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 211..245
score: 6.96
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 137..171
score: 6.051
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 172..202
score: 5.426
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 33..67
score: 10.633
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..32
score: 6.566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9721contigEcto-sp13_S_contig9721:687..5404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9721.21357.1mRNA_Ecto-sp13_S_contig9721.21357.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9721 687..5404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9721.21357.1 ID=prot_Ecto-sp13_S_contig9721.21357.1|Name=mRNA_Ecto-sp13_S_contig9721.21357.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp
LQQLLTTYRESKDAAQNLERILERMEEDGLQPDVTTYNHILDLHALLHNS
EAAVAVYEEMLSRGVKPNHRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQ
GSRAACLSMIAVMGVRCDYDGVLHTIHRMREESKLPTEAAFVWAYRAAEH
LGQVETAKQLFQHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRRLV
CVHGFNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDDTY
SAALGGLEKWFTPHRAQGAQRAFEAIARSGPPPSTRVLQRKAKGFAHAGL
WQEAEELFSLVVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat