mRNA_Ecto-sp13_S_contig9708.21344.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig9708.21344.1
Unique NamemRNA_Ecto-sp13_S_contig9708.21344.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: A0A6H5KZX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX0_9PHAE)

HSP 1 Score: 502 bits (1293), Expect = 6.470e-170
Identity = 254/272 (93.38%), Postives = 257/272 (94.49%), Query Frame = 1 
Query:    1 SSFPEVSHTPGVRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIKAGGEGLSDNEVEA 816
            S   EVSHTPGVRRSGR R+APLKFWRGDNIQYGVDEKGLQVAEGIVKGPA PEPS+TS RKRG        PPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQR PGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSD+AKAVIYWTIIKAGGEGLSDNEVEA
Sbjct:  651 SEVAEVSHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSTS-RKRGGEGKKRRRPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIKAGGEGLSDNEVEA 921
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: D8LJZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ6_ECTSI)

HSP 1 Score: 473 bits (1218), Expect = 2.490e-159
Identity = 240/262 (91.60%), Postives = 244/262 (93.13%), Query Frame = 1 
Query:    1 SSFPEVSHTPGVRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIKAGG 786
            S   EVSHTPGVRRSGR R+APLKFWRGDNIQYGVDEKGLQVAEGIVKGPA PEPS+ S RKRG        PPAVKDEHMSPLSPSKVSEMRK+KKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQR PGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSD+AKAVIYWTIIK  G
Sbjct:  553 SEVAEVSHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSPS-RKRGSEGKKRRRPPAVKDEHMSPLSPSKVSEMRKSKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIKICG 813
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: A0A7S2FXX0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXX0_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.630e-41
Identity = 100/277 (36.10%), Postives = 148/277 (53.43%), Query Frame = 1 
Query:   19 SHTPGVRRSGRHRMAPLKFWRGDNIQYGVDEKGL----QVAEGIVKGPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNL--VSHDVTATHQRQPGKEK-IGQAAQAFLVGP-EVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIK---AGGEGLSDNEVEA 816
            S + G RRS R R   L++WR + + Y   E GL     +  GI +    P   T   R R             KD  MS   P +VS++ +  +FK  +K +   VW+E+ A     +++  S  +     ++  T  R PG+E  +G AAQ FL+ P    I  W++G + LPP AIKD+E V   +Q++ VAE QP + E+AIAMP  + ++  F+ ++AQR+LLSPGD F+V   NVYRL+NHS +    ++WTIIK   A  +   + E EA
Sbjct:    3 SDSSGARRSKRQRYPVLEYWRNERMIYERPEDGLGEVLPMVAGISERSKTPAAPTRKKRPR-------------KDISMSQPVPIQVSDLPEQYEFKDSDKGR---VWNEKEAKASKMKIICRSKAMKKTERELPITADRDPGEEDLVGVAAQGFLMNPMSSAIPGWISGYVTLPPRAIKDAEGVGYCSQVFFVAECQPGSFEVAIAMP--QDQQIVFEPESAQRYLLSPGDQFFVAPGNVYRLQNHSKKVDCKLFWTIIKPLEAADKSSDEGEEEA 261
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: A0A7S2SRM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 4.810e-34
Identity = 91/253 (35.97%), Postives = 133/253 (52.57%), Query Frame = 1 
Query:   34 VRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKE-KIGQAAQAFLV---GPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIKA 780
             RRS R R  PL +W+ +   Y       + +EG+  G   P  +  S R +          P  +        PSK  ++ + ++FK   K +K  VW EE    +   V+  SS L   ++  T +R   +  ++G AAQAF V   GP+  +  W++G + LPP AIKD E V  S+Q++ VA+ QP +LE+AI +   +   T FD  TAQRFLLS GD FY+P  N+YRLENHS+     I+W II++
Sbjct:  213 ARRSRRVRYPPLAYWKNERYVYE-----RRASEGL--GEVLPTVAGVSERTKTPAAAARKKRPRPRKIDRGNALPSK--DLPQGREFK---KHEKAKVWSEEAQRQRKMTVIARSSQLEEGELPITAKRTKDESSRVGAAAQAFKVESAGPD--LPTWISGHVVLPPHAIKDPERVGNSSQVFFVADCQPKSLEVAIGLDQDRP--TDFDRATAQRFLLSSGDQFYIPPFNIYRLENHSEDQDCKIFWAIIQS 449
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: A0A7S2B2G0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2G0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.710e-28
Identity = 67/172 (38.95%), Postives = 96/172 (55.81%), Query Frame = 1 
Query:  325 VWDEETAAFKTRQVVMSSSNLVSHD----VTATHQRQPGKEKIGQAAQAFLVG--PEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTT---------------FDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIK 777
            VW E+    K  ++V    ++  +     +T       G E +GQAAQ+FL+   P   I  W++G + LPP AIKD+E V   +Q++ VAE QP++ E++IA P+ + + T                F+  TAQRF+LS GDHF++P  NVYRLENHS      +YWTIIK
Sbjct:   10 VWSEKEQGTKKMKIVNRQESMQKNTRDLPITTDRAEHEGVE-VGQAAQSFLMDSIPSQRIPGWISGFVTLPPLAIKDAEGVGFCSQVFFVAECQPESFELSIADPASEHQVTRRQQLGAESGEIAEIIFEPATAQRFILSAGDHFFIPPGNVYRLENHSKHKTCKLYWTIIK 180
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: A0A835YQ32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ32_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.220e-27
Identity = 66/162 (40.74%), Postives = 92/162 (56.79%), Query Frame = 1 
Query:  301 MEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKIGQAAQAFLV--GPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTT--FDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTII 774
            M  ++ CLV+D +    + +Q++  + +LV   +     +        QAA+AF V      G+S W +G L LPP  +K +E V   TQ+Y V   +P +LE+AIA   + + R    FD  TAQR+LLSPGDHFYVP  NVYRLENH+  A A I W I+
Sbjct:    1 MRMEESCLVYDVDARGEEQKQIIFRNDSLVYQSLHLADGQAENSAPC-QAARAFSVRGAAACGLSSWSSGALTLPPRGLKAAERVDDHTQLYWVTSCRPYSLELAIAKIPEGSDRPADAFDDATAQRYLLSPGDHFYVPPRNVYRLENHAPDADAQICWAIL 161
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: B8BWA8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWA8_THAPS)

HSP 1 Score: 119 bits (297), Expect = 1.500e-26
Identity = 98/293 (33.45%), Postives = 146/293 (49.83%), Query Frame = 1 
Query:   13 EVSHTPG---VRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEG-----IVKGPARPEPSTTSSRK---------RGXXXXXXXXPPAVKDEH------MSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKI-GQAAQAFLVGPEVG--ISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIK--AGGEGLSDNE 807
            E   TPG   +RRS R R  PL+FW+ + + Y    +   + E      +V G  + +P+    RK          G XXXXXXX       +       +P  P  +      KK++L   +    +W E        +VV    N     +  ++ R+  + K+ G A+QAF V  +       +++G + LPP  IKD+E V L +Q++ V + QP++LE A+A P+ +     F+AKTAQR+LLS GD F +P  NVYR+ENHS   KA ++WTIIK  +  E  SD E
Sbjct:  523 EEPRTPGGTEIRRSHRARFKPLQFWKNEKLIYEAQNESGLLGEAMGDMPVVSGVHKAKPTPYKERKVTVKPKQEKNGKXXXXXXXXXXXXXSYDGGPNAKNPFDPKTLG-----KKYQLNNGEHGS-IWSETLEDTTESKVVSRLDNRSFSKLPLSNTRKKKESKVVGFASQAFHVPTDQDDLFPGYISGNVVLPPRGIKDAEGVGLCSQVFNVGDCQPNSLEFALADPTNQDGE--FNAKTAQRYLLSKGDMFQIPPGNVYRIENHSKTDKACLFWTIIKCTSRAEAASDGE 807
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: K3WQF2_GLOUD (CENP-C_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQF2_GLOUD)

HSP 1 Score: 110 bits (275), Expect = 1.070e-23
Identity = 76/253 (30.04%), Postives = 120/253 (47.43%), Query Frame = 1 
Query:   31 GVRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSP----LSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIK 777
            GVRRS R R  PL +++G++  Y   E G+ +    V G  R   +T +   R             K  H +P    + P   S + K  K+   E  +   ++D          V+  +S +   ++ +     PG      A Q+F +      S W+ GRL LPPGA K++E V  + Q++ V   QP A+E++    + +     FD   A RFLL+PGD FYVP  N Y L+N+S++A   +++TI+K
Sbjct:  372 GVRRSKRKRFKPLAWYKGEHYVYERRESGVGLVIPTVAGIERVGTTTPTKTARKY----------TKKSHSNPQRKAIKPFPKSSLPKGLKY---EDGEWADLYDTSAGCINKMNVICRASEIEHRELPSVDGEVPGF-----AGQSFNLRNSHPFSRWICGRLGLPPGAAKEAESVGEAVQVFYVTNCQPGAVEVSFGPVTDEY----FDTTKATRFLLNPGDEFYVPSRNAYYLKNYSEKATCDLHFTIMK 602
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: T0QG80_SAPDV (Mif2_N domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG80_SAPDV)

HSP 1 Score: 107 bits (266), Expect = 1.830e-22
Identity = 83/256 (32.42%), Postives = 117/256 (45.70%), Query Frame = 1 
Query:   31 GVRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVK-----GPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKI--GQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIK 777
            G RRS R R+ PL +++ +   Y   + GL +    +      G   P  +   +RK+             K +H +  +    SE      FK    D   L WDE +A  K       +  ++    TA     P ++ +  G A Q F V     +  W++GR+ LPPGA+K SE V    Q+++V   QP ALE+A   PS  T    FD  TA RF L PGD FYVP NN Y L NHS   +A + + I+K
Sbjct:  485 GPRRSKRRRIQPLAWYKCERPVYERRDNGLGLILPTISHIERAGTNSPIKNAAGNRKK-------------KSKHATFPASQLPSE------FKYSTADSGEL-WDEASATSK-------NVKMIGRYGTADLFPLPAEDGVPSGFACQTFNVVGSTSVPTWISGRVLLPPGAVKASESVGSCAQVFIVIGCQPMALEVAFGHPSNPT----FDDATASRFTLGPGDEFYVPANNAYFLRNHSPTVEAELRFMILK 709
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BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Match: A0A067CPM9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPM9_SAPPC)

HSP 1 Score: 106 bits (265), Expect = 2.090e-22
Identity = 80/256 (31.25%), Postives = 117/256 (45.70%), Query Frame = 1 
Query:   31 GVRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVK-----GPARPEPSTTSSRKRGXXXXXXXXPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKI--GQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAKAVIYWTIIK 777
            G RRS R R+ PL +++ +   Y   + GL +    +      G   P  +   +RK+             K +H +       S++    K+   +  +   +WDE +A  KT         ++    TA     P ++ +  G A Q F V     +  W++GR+ LPPGA+K SE V    Q++VV   QP ALE+A   PS       FD  TA RF L PGD FYVP NN Y L NHS   +A + + I+K
Sbjct:  341 GPRRSKRRRIQPLAWYKCERPVYERRDNGLGLILPTISHIERAGTNSPIKNAAGNRKK-------------KSKHAT----FPASQLPPQFKYSTADAGE---LWDEASATSKT-------VKMIGRYGTADLFPLPAEDGVPSGFACQTFNVVGSTSVPTWISGRVLLPPGAVKASESVGSCAQVFVVIGCQPMALEVAFGHPSSPA----FDDATASRFTLGPGDEFYVPANNAYFLRNHSTSVEAELRFMILK 565
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9708.21344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZX0_9PHAE6.470e-17093.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ6_ECTSI2.490e-15991.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FXX0_9STRA1.630e-4136.10Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SRM5_9STRA4.810e-3435.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2B2G0_9STRA2.710e-2838.95Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YQ32_9STRA2.220e-2740.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8BWA8_THAPS1.500e-2633.45Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K3WQF2_GLOUD1.070e-2330.04CENP-C_C domain-containing protein n=1 Tax=Globisp... [more]
T0QG80_SAPDV1.830e-2232.42Mif2_N domain-containing protein n=1 Tax=Saprolegn... [more]
A0A067CPM9_SAPPC2.090e-2231.25Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9708contigEcto-sp13_S_contig9708:100..6022 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score473.4
Seed ortholog evalue7.2e-131
Seed eggNOG ortholog2880.D8LJZ6
Model size819
KEGG koko:K11497
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs29KWX@1,2RU66@2759
Cds size819
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9708.21344.1prot_Ecto-sp13_S_contig9708.21344.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig9708 100..6022 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464234.613268-CDS-Ecto-sp13_S_contig9708:99..1411681464234.613268-CDS-Ecto-sp13_S_contig9708:99..141Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9708 100..141 -
1681464234.6259067-CDS-Ecto-sp13_S_contig9708:539..6861681464234.6259067-CDS-Ecto-sp13_S_contig9708:539..686Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9708 540..686 -
1681464234.636069-CDS-Ecto-sp13_S_contig9708:3730..39041681464234.636069-CDS-Ecto-sp13_S_contig9708:3730..3904Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9708 3731..3904 -
1681464234.646019-CDS-Ecto-sp13_S_contig9708:4547..46421681464234.646019-CDS-Ecto-sp13_S_contig9708:4547..4642Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9708 4548..4642 -
1681464234.6571443-CDS-Ecto-sp13_S_contig9708:5122..53041681464234.6571443-CDS-Ecto-sp13_S_contig9708:5122..5304Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9708 5123..5304 -
1681464234.6718342-CDS-Ecto-sp13_S_contig9708:5843..60221681464234.6718342-CDS-Ecto-sp13_S_contig9708:5843..6022Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig9708 5844..6022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig9708.21344.1

>prot_Ecto-sp13_S_contig9708.21344.1 ID=prot_Ecto-sp13_S_contig9708.21344.1|Name=mRNA_Ecto-sp13_S_contig9708.21344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=273bp
SSFPEVSHTPGVRRSGRHRMAPLKFWRGDNIQYGVDEKGLQVAEGIVKGP
ARPEPSTTSSRKRGGEGKKRRRPPAVKDEHMSPLSPSKVSEMRKNKKFKL
MEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRQPGKEKIGQA
AQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDAL
EIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDQAK
AVIYWTIIKAGGEGLSDNEVEA*
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mRNA from alignment at Ecto-sp13_S_contig9708:100..6022-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig9708.21344.1 ID=mRNA_Ecto-sp13_S_contig9708.21344.1|Name=mRNA_Ecto-sp13_S_contig9708.21344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5923bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9708:100..6022- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGTCATTTCCAGAGGTGAGCCACACCCCGGGCGTGAGACGGTCAGGCAG
GCACCGCATGGCCCCGCTCAAGTTCTGGCGCGGGGACAACATCCAGTACG
GAGTGGACGAGAAGGGCCTGCAAGTGGCGGAGGGCATCGTCAAGGGGCCG
GCCCGGCCCGAGCCATCAACAACGTCGAGGTAAGGTGGCGTGCTGCTGCG
GCTGCTGCGCTAGCTGCCAGGGCTGCTGTGTTGTGAACGAATGAGCACGG
GGAGGACGGGCTGTGGGAAGGAGAAGGCATGCTGCAAAGTGGTTGCTGTG
TGACGACTAGGGGCTGAAGGAATGAAAACCATGGGGTAGACCGCTGTAGT
GTGGGTCGACTTGGCCTTGCCACTCTGGGACGGGGCCGACCCACCCGCGT
TGGAGACCTAATCTACCGCTTCCTGGGTTCGCGGTTGAGCACAACAAAAG
CCAACAGCAGTAGCAGCAGCAGCAATGACTTCGGGAAATATTCAAGCACC
CGTTTGCTGTGCCGCAACAAGCGTGTCCCATGAGTTTGATTGAGTCGACA
GCGTGCCGAGCACTCCGCGTTGTTTATCCTCCCGTTCCCGAAACAGAACG
ACCCGCGTGTGCCATCTCCATCTTGTTCGCTTGTTGAACTCCATAACAAG
CACACCGGACACACTGGTAATAACGTGCGACGTACATACACCCGCGTGCC
GCGTGTGGTGGGGGCGAGCAGGAAGCGAGGGGGTGAGGGAAAGAAGCGAA
GACGACCGCCGGCGGTGAAGGACGAGCACATGAGCCCCTTGAGCCCCTCC
AAGGTGTCGGAGATGCGGAAGAACAAGAAGTTCAAGCTGATGGAGAAGGA
CCAGAAGTGCCTCGTGTGGGATGAGGAGACAGCCGCCTTCAAAACCAGAC
GTGAGCGGGGGCGGGTGCCTGTGGGATTCTGGCAGTTGCGTCTCTTGTTT
TCGGCGGTGGTGGTGGAGAATGCGTGGCGTGTGGGGTAAGGGGTTCGGGT
GTTTTGTTTGTGTTCTCGGCGGGTGTGATTGGTTCATGTGTGTATTGATT
TGGTTTCGGTCATGGTGTGCATTGGCCTACATTGTAGACTCCAAGACTAT
GCCTCTCGGTCTGGTGTAGAAGTACAGTACCTTGTTTGGTTTTGCAGATC
TTCAAAAAGACAAATTGCGAACGAACGCGTGATTTGCTGCCCTTCGGTGT
TTATCGAACCCTCGATTCCCAGTTCCTCAACGTCTCCGCCCCCCTCACAC
CGAGAAGCAAGATTTGCAATAGAACGGCGGCTGCGTACTCAGTTAGTTAG
CACTCCGTCGCCCCCTCATCCCCCGGCTCCCATTACTTAAAGACCAACTG
CTGTGCCCCCACCGTTTTTTTTTACGCCAGAGGTGGTGATGAGCAGCTCA
AACCTTGTCTCCCACGACGTGACCGCGACGCACCAGAGGCAGCCGGGCAA
GGAAAAGATCGGACAGGCGGCCCAGGTGTGTTGGGTAGACGTACCGGTAG
AATGCCACTGCTTTTGACCGGTCTGGCCTTGAGCTTGCTACGCTACCATC
TCTTGCTGAGTACATAGCGTGGAACCGTCGACAAAATAAACTCTCCACGT
TTAGTTCTACGCGGGAGCGATGCCCGATGGAGCATGTAGCTATAGTTGAC
CCCAGCATCGCCCGAAGGTTGCATCTCGGCATCTCGGCGTGCAAACTGGA
CGCCGCCACTTTTGACGGACACATGTTCGCTCGCCACAATGGCGTCGTCG
GTGATGATGGTGGTGACGATGTTGTTGGTGTTGCTATCTTCCAGTTATTA
ACCGGAGCTAATCTCTCCAACCCGTCGCTCCCCTTCCCCGCTTTTCAATG
GCTGCAAAAACACTTTTACGTGGCCACAAGGTATCCCAAACAAGGGATAG
CCAACCATCGAAACAAACAGACACAACGTCGCGTCCCGCCAGTCAGCGAG
ACGTGAAAGAGTTCCTGACATATCTCGAGAAAACCAAAACAGTAGGCTAA
GGGAAAACAGACAGGGTGGGCACGCACGTACAACAGCGCCTAGCTATTGC
GGTGTGGACCTCGGCCTTTTGATCTCCCTCCTTATTCGCCCTTTGCTGAC
CCTAACCCTTGGCGGCAGGCGTTTCTCGTGGGCCCCGAGGTGGGCATATC
GGAGTGGCTCACGGGGCGGCTGGAGCTGCCTCCGGGGGCTATCAAAGACT
CGGAGCACGTGGCGCTCAGCACGCAGATCTACGTGGTGGCGGAGGGGCAG
CCGGACGCGCTCGAGATCGCTATCGCTATGCCCAGCAAGAAGGTACACGG
GCGTGGAAAGGAACGTCTATCTAGTGTGTGTCCCGGTGCCTTCGCTCTTG
GTTGGTGTGTGCTGTGGCTGCTGTTGCTCTACTAGGGTTGGCTATAGCTG
CAGATACAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTATCTATCTTTCTCTCCCTCGCGCTCTATCGATGCATGTATTTCTT
TCAAAATAGTAGCATCGGTCATGATAACCGGGTGACCAATGGTGTCTCTA
TTTGTGTGTATTTCTTGCAATATTTATATTTATTTCATCGACCACGCTAA
CCGGCTGACAAACAAAAACGCCAGTCTTTTGGCGGGATAAACAACGCGAA
CGCACTCTCTGGTTTAAGGGTTTCTACCGACTGGGGGAGGCGCAGGAGTT
TGACGACGGTAGTGTTCGTGTTTGCTTCCGAGGTACAAGGAGAGTGCTCA
ATGCCACCAAACAGCAATTGTTGCTGTTCCACCTGTTTGTCTCACGCAAT
GATACATAGCATCATTGCCCAGTGCCGGGTTCCTTTCTTACCGACTTCGT
GTTGCGCCTAGGGAGACCGCTACTAGCTTCATCACGGCCATCCATCCCTG
CAACTCTCTCTTCGATTCTCTCTCTCTTAACACCGCCGTTGCTCTGAACA
TCTCAAGGCTCAGAGCCAATAATTTCTTCAACTAAGCTATCTCTGACTCT
GCTTGTCTCTTGTTGCACATCAGTGGGCACTCCCCCTCGTCCCCCTTGCG
ATCCGTTCGTTGGGAACCAACCGCCATCGTTTGCCATCCGAATGGTTCGG
CTGGAGTATGAGCTACAATTCAACCCGCCGTCTCCGAAGTAGTCGCGGGT
CCGCTTCGAAAAGAAGCGTGTGTGTCGTTGTCCTGGTGCTCTTGCGACCT
TGCGTTTCCAACCGCGGTGGGGTATGCGATCGTCGTACGTAAGGCTCGGC
TAATTTGGTGCACACAACGTTAATGGTGACAAGCCCAGCGCGTGTGGAAG
ACTTGCCGTCGATGGAGCGACCACCTCGGCGTCAACCGTGGCAGTCGTTC
CGCTGCTGTTGGGGGTAGGGCGTGGTGAGCGGGGCAGGTACTGTATCTGT
CCCACCGGAGATGGGTTTCTCGGACTCGTACCTTTTGCCGAACGAGAAAA
AAAGCCTCCCTCGAGATTTTCCACGATCGGGAACGGCGAGGCCCCACTAG
CCTGGAGTCGGCTGTTGACGAACAAACTTCTGTTGACCGCGAGAAGTTAA
TTGCCCATCTCTTGCAGACTGACGCTCCGCGCACCCCCGTAAAAACCGTA
GCGAGAACCGTGACTTCTTTTATCGCGAAATGGATAGTAAGGAGGCCGAA
AAATTACCATCCTCGGGACTGTTGGATTTCTTCTTGACCCCACCAACGGT
ACGCTGGTAGGATATCGACTGCATCACATTTCAACAGCGCACCGCTGGTA
GGGTCAAGAAGAAATCCAACGGTCCCGAAGTTGGTAATTGTTCGGCCTAC
TTACTGTGTTGCGCGATCAAAGAAACCACTATTCTCGCTGCGGTTTTTAC
AGTAACGCGCGGAGCGTCAGTCTGCAGGAGACGACTTCCTAAGTTCTCGC
GGTCAACAGAAGTTCGTCCACCACCTGTACCAGGTTAGGTTGGATTGGCC
GTTCCCGTTTGTGGGAATCTTGAGGGAGCCGTTTTTGCTGTCATGCAAAA
AGTACTAGACTGAGAAATTCGTCCCGTGCGGGACCGCAGTACCTGCACCC
CTGAGAGCACATCATACGCCCTTCCGACGTTTCCACCCCCACAACGGACC
AGCTGCCATGGTGAACGCTCCGTCGACGGCAGGTCCTCCGATACGCCCGG
CTGCTGCTTCGAACCTGTGCCTCTGCTGAATGAGTTGCCCTTCCACCTTT
TTCAGCTTGCTCTTTTTCCCGCTCTCTCTCGTCCATAGGTAGGGGTCCTT
TTCGGCCTATTCGGTGTTGTTTTTCCTTGCGTTCCGTGACATCCGTAGAA
CCCTCCATCTCGGCCAATAACCCCCTCGCACATTGCCCGATATTGCCGAA
TAGTAATGTGGCCCGTGGGGGGACCTCGCTGACACTGAAGCTCCGAACCA
ATACAGACAAGGACTGCGAACTTCCTCGACTAGTTGTGTTGGGTAGTCGG
TGCTGATCGTCGGAGGCGTGGAGGCCATATTGACCCAACATCATGGGTGA
TTTCGATTGAAGAGGCCACGATGGCCCACGCACGGCAGACTGGGAATCGT
CGCCCTTCTTCAAACGCATACCCAATGGAGCCCGAAACCCTTTTATCTCC
GCAGATCCGTACCTAGCGCTAGGGCAGCCATTCCTAGTAAGCTGGCAGAG
AGCACCCTTCATTATTGCACTCCGCCCGTGTCACGCCTCCTCGTCGAAGC
TGAACTCCCTCCGTTTCCTTTCGAAATCAAGTCAACGGCGAAAATCATGT
TACTTCGATAAGAATCGGTTGAAGAAATCGGACACAAGCGACCTCGATAC
TCAAACGACGCTAGCACTGTTGGCCATTTTACACAAGTGCGCCGCTGCTG
GGACATGCAGATGGCCTATGAACCGTTTTTTGTAGCCGTCACTCTTCGAA
TGTGCCCCTTGTTTATTTTTTTTACATCCCGCTTCCCTTCATTCAATTCC
TCTCCTTGCTGCATATTTTGGCTTTTTTCATGTTTTTTCGCTGGCCTCTT
TCGATCGGTTTCACTTTTTATCCCCTGCTTCCCTTTCCCTTGTCCGTAAT
TTCGTCTCTGTTTCATTTTCTCCTTTGTCTACGAGTGTTCGCTTTCTCAT
ATGCTCTACTGTTGTTCCCGTCTCCCTTGGCATAGGTCTCTTGTAAAACA
TGTCAATCGTGTTGAGATGGCGAGAGATGAGAGAAAACAGGTATGGTGAG
AGACAGAGAACGAAACCCGAGATCTCGACAGCAGCCAGCCACTCGCTGTT
CCCCCTTGCCTCCCACAATGGATAGTAGCACCACCTCGTTTTCGCACCCA
TACCTTTACCTCATGCCTTGTATGGTACTTGATCAGACGAAGAGAACCAC
CTTCGACGCCAAGACGGCCCAGAGGTTCCTGCTCTCTCCGGGGGATCACT
TCTATGTCCCCGTCAACAACGTCTACCGCCTCGAGAACCACTCGGACCAG
GCCAAGGCCGTCATCTACTGGACCATCATCAAGGTAACTTTGCACCGCAG
TTTATATAGAGATATGTGTACATGTATGTCCTTTGTTTTTGTACGTTGTT
TTCAGTTATGCTGGTTGCGCAGCGGATGGTCGGCTCGATTGTGCAACACG
AACGGGTCCGATGTCACACCGAGGCTTGCCCCCACCAAGCATGCATCGTG
GCTTCCGGTGCGTTTTTGTTGTCCAAGTCATGTGTTCACAGAAAACTTAT
GGAACGCAGACCTTGTAATATACACACATGCATCGGGAAAGTGGTGTATT
TCACGTCGCCCCGACGACCTGTTGCAAAGCTCCCACTCGTTCGAAACCCT
TCATGATGTTGGTTTATGCGTGCTGATTTGTATCCGTTGTTTTGTTGTTG
CCGCTGACGTGTAACGTTTTATGTCCTGCAGGCCGGAGGCGAAGGGCTGT
CGGACAACGAGGTGGAGGCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9708:100..6022-

>mRNA_Ecto-sp13_S_contig9708.21344.1 ID=mRNA_Ecto-sp13_S_contig9708.21344.1|Name=mRNA_Ecto-sp13_S_contig9708.21344.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=819bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9708:100..6022- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGTCATTTCCAGAGGTGAGCCACACCCCGGGCGTGAGACGGTCAGGCAG
GCACCGCATGGCCCCGCTCAAGTTCTGGCGCGGGGACAACATCCAGTACG
GAGTGGACGAGAAGGGCCTGCAAGTGGCGGAGGGCATCGTCAAGGGGCCG
GCCCGGCCCGAGCCATCAACAACGTCGAGCAGGAAGCGAGGGGGTGAGGG
AAAGAAGCGAAGACGACCGCCGGCGGTGAAGGACGAGCACATGAGCCCCT
TGAGCCCCTCCAAGGTGTCGGAGATGCGGAAGAACAAGAAGTTCAAGCTG
ATGGAGAAGGACCAGAAGTGCCTCGTGTGGGATGAGGAGACAGCCGCCTT
CAAAACCAGACAGGTGGTGATGAGCAGCTCAAACCTTGTCTCCCACGACG
TGACCGCGACGCACCAGAGGCAGCCGGGCAAGGAAAAGATCGGACAGGCG
GCCCAGGCGTTTCTCGTGGGCCCCGAGGTGGGCATATCGGAGTGGCTCAC
GGGGCGGCTGGAGCTGCCTCCGGGGGCTATCAAAGACTCGGAGCACGTGG
CGCTCAGCACGCAGATCTACGTGGTGGCGGAGGGGCAGCCGGACGCGCTC
GAGATCGCTATCGCTATGCCCAGCAAGAAGACGAAGAGAACCACCTTCGA
CGCCAAGACGGCCCAGAGGTTCCTGCTCTCTCCGGGGGATCACTTCTATG
TCCCCGTCAACAACGTCTACCGCCTCGAGAACCACTCGGACCAGGCCAAG
GCCGTCATCTACTGGACCATCATCAAGGCCGGAGGCGAAGGGCTGTCGGA
CAACGAGGTGGAGGCTTGA
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