prot_Ecto-sp13_S_contig97041.21341.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97041.21341.1
Unique Nameprot_Ecto-sp13_S_contig97041.21341.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
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BLAST of mRNA_Ecto-sp13_S_contig97041.21341.1 vs. uniprot
Match: A2SMP4_METPP (Uncharacterized protein n=2 Tax=Methylibium TaxID=316612 RepID=A2SMP4_METPP)

HSP 1 Score: 56.2 bits (134), Expect = 4.230e-8
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    4 IPKDRPVLGSDLHALKNALGLTVDDARWVFGISMNRWGDIVQK 46
            IPK+RPVLG DL A++   GL V DA W+FG+S+ RW  IV++
Sbjct:    4 IPKNRPVLGKDLDAVRTQYGLLVSDACWLFGLSITRWMQIVKR 46
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97041.21341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A2SMP4_METPP4.230e-855.81Uncharacterized protein n=2 Tax=Methylibium TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97041contigEcto-sp13_S_contig97041:384..524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97041.21341.1mRNA_Ecto-sp13_S_contig97041.21341.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97041 384..524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97041.21341.1 ID=prot_Ecto-sp13_S_contig97041.21341.1|Name=mRNA_Ecto-sp13_S_contig97041.21341.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
IIDIPKDRPVLGSDLHALKNALGLTVDDARWVFGISMNRWGDIVQKN
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