mRNA_Ecto-sp13_S_contig9690.21326.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: D7G353_ECTSI (Putative periplasmic protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G353_ECTSI) HSP 1 Score: 544 bits (1401), Expect = 5.460e-185 Identity = 296/351 (84.33%), Postives = 310/351 (88.32%), Query Frame = 1
Query: 10 GKGGEEDSPASGSSGKSNGGKGTDKSNASLGVFGGLMKAFTHEDAHGQHLDFHSMNDMFAKDAEALAVASGPKLDMPSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAKDRKSTRGGIHRTKKHGTRKGKRXXXXXXRSKREPESSAASAGEGKKAXXXXXXXXXXENGERFVRESVLMGEKAGEETSIGDVSASASSQEGGSSNSTVTTSSGKPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
GKGGEED+PA+GSSGK TDKSNASLGVFGGLMKAFT EDAHGQHLDFHSMNDMFAKDAEALA ASGPKLD+PSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAK +KS GG HRTKKHGTR+GKR RSK+EPESS+ASAGEGKKA ENGERFVRESVLMGEKA E S+GD+SASASS+EGGS NSTVT S GKPQ+RVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGN TTDE +VVLESPGGEVTEFGLAAARL RLKD GFRLTVCVDKVAASGGYM+ACIADEL TAPFAMLGSIGVVGGM NFNKALKKYGVDYF FTSG+
Sbjct: 321 GKGGEEDNPAAGSSGKXXXXXXTDKSNASLGVFGGLMKAFTPEDAHGQHLDFHSMNDMFAKDAEALAAASGPKLDIPSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAKKKKSKWGGTHRTKKHGTRRGKRKHSSNKRSKQEPESSSASAGEGKKAAGE-------ENGERFVRESVLMGEKADETASVGDLSASASSREGGSLNSTVTASPGKPQKRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMIACIADELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQ 664
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A6H5KTD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD1_9PHAE) HSP 1 Score: 456 bits (1172), Expect = 2.390e-155 Identity = 256/299 (85.62%), Postives = 265/299 (88.63%), Query Frame = 1
Query: 172 MNDMFAKDAEALAVASGPKLDMPSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAKDRKSTRGGIHRTKKHGTRKGKRXXXXXXRSKREPESSAASAGEGKKAXXXXXXXXXXENGERFVRESVLMGEKAGEETSIGDVSASASSQEGGSSNSTVTTSSGKPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEA--IVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
MNDMFAKDAEALA ASGPKLD+PSLLAGSGGDDG SSMVGLMKAFKGLYGDKQEAKDRKST GGIHRT+KHGTRKGKR RSK+EPES XXXXXX ENGERFVRESVL+G KAGE+TS+GDVSASASSQEGGS NST T SSGKPQ+RVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGN TTDEA +VVLESPGGEVTEFGLAAARL RLKD GFRLTVCVDKVAASGGYMMACIADEL TAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSG+
Sbjct: 1 MNDMFAKDAEALAAASGPKLDIPSLLAGSGGDDGRSSMVGLMKAFKGLYGDKQEAKDRKSTWGGIHRTQKHGTRKGKRKHCSRKRSKQEPESXXXXX-------XXXXXXAGEENGERFVRESVLLGGKAGEKTSVGDVSASASSQEGGSLNSTATASSGKPQKRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEASVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMMACIADELTTAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGQ 292
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A5C8C950_ACISP (Protease SohB n=1 Tax=Acinetobacter sp. TaxID=472 RepID=A0A5C8C950_ACISP) HSP 1 Score: 142 bits (358), Expect = 5.780e-36 Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 652 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
K +++FVV F+ A Q L E ++ ++A D +V LESPGG V +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+++I APFA+LGSIGVV + NFNK LK++ +DY FT+GE
Sbjct: 54 KNDQKIFVVDFKGDVYAHAVEQ-----LREEITMILATAKAGKDRVVVRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANDIIAAPFAILGSIGVVAQLPNFNKLLKEHNIDYEVFTAGE 185
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A1G6H1K4_9GAMM (Inner membrane peptidase. Serine peptidase. MEROPS family S49 n=2 Tax=Acinetobacter TaxID=469 RepID=A0A1G6H1K4_9GAMM) HSP 1 Score: 142 bits (357), Expect = 8.080e-36 Identity = 73/137 (53.28%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 652 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
K +++FV+ F+ + A Q L E ++ ++A D ++ LESPGG V +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E+I APFA+LGSIGVV + NFNK LK++ +DY FT+GE
Sbjct: 54 KNNQKIFVLDFKGDMNASAVEQ-----LREEITLILATAKAGKDRVVLRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAAPFAILGSIGVVAQLPNFNKLLKEHHIDYEVFTAGE 185
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A1E7RAX4_9GAMM (Protease SohB n=1 Tax=Acinetobacter qingfengensis TaxID=1262585 RepID=A0A1E7RAX4_9GAMM) HSP 1 Score: 141 bits (356), Expect = 1.130e-35 Identity = 72/137 (52.55%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 652 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
K +++FV+ F+ A Q L E ++ ++A D ++ LESPGG V +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E++ APFA+LGSIGVV + NFNK LK++ +DY FT+GE
Sbjct: 54 KNNQKIFVLDFKGDMQASAVEQ-----LREEITMILATAKAQKDRVVLRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIVAAPFAILGSIGVVAQLPNFNKLLKQHHIDYEVFTAGE 185
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A1Z9YY75_9GAMM (Protease SohB n=2 Tax=Acinetobacter TaxID=469 RepID=A0A1Z9YY75_9GAMM) HSP 1 Score: 140 bits (352), Expect = 4.300e-35 Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 652 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
K +++FV+ F+ A Q L E ++ ++A D ++ LESPGG V +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA E++ APFA+LGSIGVV + NFNK L+++ +DY FT+GE
Sbjct: 54 KHNKKIFVLDFKGDIQASAVEQ-----LREEITMILATAKAGKDRIVLRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIASEIVAAPFAILGSIGVVAQLPNFNKLLRQHNIDYEVFTAGE 185
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A0E2GKY8_ACIRA (Peptidase S49 family protein n=8 Tax=Acinetobacter TaxID=469 RepID=A0A0E2GKY8_ACIRA) HSP 1 Score: 138 bits (348), Expect = 1.640e-34 Identity = 70/137 (51.09%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 652 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
K ++++V+ F+ A ++ L E ++ ++A D +V LESPGG V +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E+ITAPFA++GSIGVV + NFN+ LK++ VD+ +T+GE
Sbjct: 54 KNNQKIYVIDFKGDVQASA-----VENLREEITLILATAKAGKDRVVVRLESPGGMVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIITAPFAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGE 185
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A5C8BUH5_ACISP (Protease SohB n=1 Tax=Acinetobacter sp. TaxID=472 RepID=A0A5C8BUH5_ACISP) HSP 1 Score: 137 bits (346), Expect = 3.190e-34 Identity = 69/137 (50.36%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 652 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
K +++FV+ F+ A D + E ++ ++A D +V LESPGG V +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E+I+APFA++GSIGVV + NFN+ LK++ VD+ +T+G+
Sbjct: 54 KNNQKIFVLDFKGDIQASAA-----DTIREEITLILATAKAGHDRVVVRLESPGGMVHGYGLAAAQLVRLRDAGFNLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLLKQHNVDFEMYTAGQ 185
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: UPI001C11D58A (protease SohB n=2 Tax=Moraxellaceae TaxID=468 RepID=UPI001C11D58A) HSP 1 Score: 137 bits (344), Expect = 6.790e-34 Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 655 PQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
P +VFV+ F A L E +S L++ N DE ++ LESPGG V +GLAAA+LVRL+D+G +LTVCVDKVAASGGYMMAC+AD+++ APFA++GSIGVV + NF+K LK + VDY QFT+G+
Sbjct: 64 PSAQVFVLDFDGDMKASAVKH-----LREEISTLISTAN-KGDEVVIRLESPGGIVHGYGLAAAQLVRLRDAGLKLTVCVDKVAASGGYMMACVADKIVAAPFAVVGSIGVVSQLPNFHKWLKNHDVDYEQFTAGD 193
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: UPI0003717366 (protease SohB n=1 Tax=Psychrobacter lutiphocae TaxID=540500 RepID=UPI0003717366) HSP 1 Score: 136 bits (343), Expect = 1.130e-33 Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 661 RRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 1062
+R+FV+ F A L E +S +++ I DE +V LES GG V +GLAAA+LVRLKD+G LT+CVDK+AASGGYMMAC+AD+++ APFA++GSIGVV M NFNK LKK+ +DY FT+GE
Sbjct: 64 KRIFVLDFDGDIKASAVKH-----LREEISAIISTAKIG-DEVVVRLESGGGMVHSYGLAAAQLVRLKDAGLTLTICVDKIAASGGYMMACVADKILAAPFAVIGSIGVVSQMPNFNKWLKKHDIDYEMFTAGE 191 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9690.21326.1 >prot_Ecto-sp13_S_contig9690.21326.1 ID=prot_Ecto-sp13_S_contig9690.21326.1|Name=mRNA_Ecto-sp13_S_contig9690.21326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=357bp MHAGKGGEEDSPASGSSGKSNGGKGTDKSNASLGVFGGLMKAFTHEDAHGback to top mRNA from alignment at Ecto-sp13_S_contig9690:366..6182+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9690.21326.1 ID=mRNA_Ecto-sp13_S_contig9690.21326.1|Name=mRNA_Ecto-sp13_S_contig9690.21326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5817bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9690:366..6182+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9690:366..6182+ >mRNA_Ecto-sp13_S_contig9690.21326.1 ID=mRNA_Ecto-sp13_S_contig9690.21326.1|Name=mRNA_Ecto-sp13_S_contig9690.21326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1071bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9690:366..6182+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |