prot_Ecto-sp13_S_contig9690.21326.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9690.21326.1
Unique Nameprot_Ecto-sp13_S_contig9690.21326.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length357
Homology
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: D7G353_ECTSI (Putative periplasmic protease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G353_ECTSI)

HSP 1 Score: 544 bits (1401), Expect = 5.460e-185
Identity = 296/351 (84.33%), Postives = 310/351 (88.32%), Query Frame = 0
Query:    4 GKGGEEDSPASGSSGKSNGGKGTDKSNASLGVFGGLMKAFTHEDAHGQHLDFHSMNDMFAKDAEALAVASGPKLDMPSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAKDRKSTRGGIHRTKKHGTRKGKRXXXXXXRSKREPESSAASAGEGKKAXXXXXXXXXXENGERFVRESVLMGEKAGEETSIGDVSASASSQEGGSSNSTVTTSSGKPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            GKGGEED+PA+GSSGK      TDKSNASLGVFGGLMKAFT EDAHGQHLDFHSMNDMFAKDAEALA ASGPKLD+PSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAK +KS  GG HRTKKHGTR+GKR      RSK+EPESS+ASAGEGKKA          ENGERFVRESVLMGEKA E  S+GD+SASASS+EGGS NSTVT S GKPQ+RVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGN TTDE +VVLESPGGEVTEFGLAAARL RLKD GFRLTVCVDKVAASGGYM+ACIADEL TAPFAMLGSIGVVGGM NFNKALKKYGVDYF FTSG+
Sbjct:  321 GKGGEEDNPAAGSSGKXXXXXXTDKSNASLGVFGGLMKAFTPEDAHGQHLDFHSMNDMFAKDAEALAAASGPKLDIPSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAKKKKSKWGGTHRTKKHGTRRGKRKHSSNKRSKQEPESSSASAGEGKKAAGE-------ENGERFVRESVLMGEKADETASVGDLSASASSREGGSLNSTVTASPGKPQKRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMIACIADELTTAPFAMLGSIGVVGGMTNFNKALKKYGVDYFHFTSGQ 664          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A6H5KTD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD1_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 2.390e-155
Identity = 256/299 (85.62%), Postives = 265/299 (88.63%), Query Frame = 0
Query:   58 MNDMFAKDAEALAVASGPKLDMPSLLAGSGGDDGGSSMVGLMKAFKGLYGDKQEAKDRKSTRGGIHRTKKHGTRKGKRXXXXXXRSKREPESSAASAGEGKKAXXXXXXXXXXENGERFVRESVLMGEKAGEETSIGDVSASASSQEGGSSNSTVTTSSGKPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEA--IVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            MNDMFAKDAEALA ASGPKLD+PSLLAGSGGDDG SSMVGLMKAFKGLYGDKQEAKDRKST GGIHRT+KHGTRKGKR      RSK+EPES            XXXXXX   ENGERFVRESVL+G KAGE+TS+GDVSASASSQEGGS NST T SSGKPQ+RVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGN TTDEA  +VVLESPGGEVTEFGLAAARL RLKD GFRLTVCVDKVAASGGYMMACIADEL TAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSG+
Sbjct:    1 MNDMFAKDAEALAAASGPKLDIPSLLAGSGGDDGRSSMVGLMKAFKGLYGDKQEAKDRKSTWGGIHRTQKHGTRKGKRKHCSRKRSKQEPESXXXXX-------XXXXXXAGEENGERFVRESVLLGGKAGEKTSVGDVSASASSQEGGSLNSTATASSGKPQKRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNTTTDEASVVVVLESPGGEVTEFGLAAARLARLKDRGFRLTVCVDKVAASGGYMMACIADELTTAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGQ 292          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A5C8C950_ACISP (Protease SohB n=1 Tax=Acinetobacter sp. TaxID=472 RepID=A0A5C8C950_ACISP)

HSP 1 Score: 142 bits (358), Expect = 5.780e-36
Identity = 74/137 (54.01%), Postives = 97/137 (70.80%), Query Frame = 0
Query:  218 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            K  +++FVV F+      A  Q     L E ++ ++A      D  +V LESPGG V  +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+++I APFA+LGSIGVV  + NFNK LK++ +DY  FT+GE
Sbjct:   54 KNDQKIFVVDFKGDVYAHAVEQ-----LREEITMILATAKAGKDRVVVRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANDIIAAPFAILGSIGVVAQLPNFNKLLKEHNIDYEVFTAGE 185          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A1G6H1K4_9GAMM (Inner membrane peptidase. Serine peptidase. MEROPS family S49 n=2 Tax=Acinetobacter TaxID=469 RepID=A0A1G6H1K4_9GAMM)

HSP 1 Score: 142 bits (357), Expect = 8.080e-36
Identity = 73/137 (53.28%), Postives = 98/137 (71.53%), Query Frame = 0
Query:  218 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            K  +++FV+ F+   +  A  Q     L E ++ ++A      D  ++ LESPGG V  +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E+I APFA+LGSIGVV  + NFNK LK++ +DY  FT+GE
Sbjct:   54 KNNQKIFVLDFKGDMNASAVEQ-----LREEITLILATAKAGKDRVVLRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIIAAPFAILGSIGVVAQLPNFNKLLKEHHIDYEVFTAGE 185          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A1E7RAX4_9GAMM (Protease SohB n=1 Tax=Acinetobacter qingfengensis TaxID=1262585 RepID=A0A1E7RAX4_9GAMM)

HSP 1 Score: 141 bits (356), Expect = 1.130e-35
Identity = 72/137 (52.55%), Postives = 97/137 (70.80%), Query Frame = 0
Query:  218 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            K  +++FV+ F+      A  Q     L E ++ ++A      D  ++ LESPGG V  +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E++ APFA+LGSIGVV  + NFNK LK++ +DY  FT+GE
Sbjct:   54 KNNQKIFVLDFKGDMQASAVEQ-----LREEITMILATAKAQKDRVVLRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIVAAPFAILGSIGVVAQLPNFNKLLKQHHIDYEVFTAGE 185          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A1Z9YY75_9GAMM (Protease SohB n=2 Tax=Acinetobacter TaxID=469 RepID=A0A1Z9YY75_9GAMM)

HSP 1 Score: 140 bits (352), Expect = 4.300e-35
Identity = 71/137 (51.82%), Postives = 96/137 (70.07%), Query Frame = 0
Query:  218 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            K  +++FV+ F+      A  Q     L E ++ ++A      D  ++ LESPGG V  +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA E++ APFA+LGSIGVV  + NFNK L+++ +DY  FT+GE
Sbjct:   54 KHNKKIFVLDFKGDIQASAVEQ-----LREEITMILATAKAGKDRIVLRLESPGGVVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIASEIVAAPFAILGSIGVVAQLPNFNKLLRQHNIDYEVFTAGE 185          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A0E2GKY8_ACIRA (Peptidase S49 family protein n=8 Tax=Acinetobacter TaxID=469 RepID=A0A0E2GKY8_ACIRA)

HSP 1 Score: 138 bits (348), Expect = 1.640e-34
Identity = 70/137 (51.09%), Postives = 99/137 (72.26%), Query Frame = 0
Query:  218 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            K  ++++V+ F+      A     ++ L E ++ ++A      D  +V LESPGG V  +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E+ITAPFA++GSIGVV  + NFN+ LK++ VD+  +T+GE
Sbjct:   54 KNNQKIYVIDFKGDVQASA-----VENLREEITLILATAKAGKDRVVVRLESPGGMVHGYGLAAAQLVRLRDAGFHLTICVDKVAASGGYMMACIANEIITAPFAVVGSIGVVAQVPNFNRLLKEHNVDFELYTAGE 185          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: A0A5C8BUH5_ACISP (Protease SohB n=1 Tax=Acinetobacter sp. TaxID=472 RepID=A0A5C8BUH5_ACISP)

HSP 1 Score: 137 bits (346), Expect = 3.190e-34
Identity = 69/137 (50.36%), Postives = 98/137 (71.53%), Query Frame = 0
Query:  218 KPQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            K  +++FV+ F+      A      D + E ++ ++A      D  +V LESPGG V  +GLAAA+LVRL+D+GF LT+CVDKVAASGGYMMACIA+E+I+APFA++GSIGVV  + NFN+ LK++ VD+  +T+G+
Sbjct:   54 KNNQKIFVLDFKGDIQASAA-----DTIREEITLILATAKAGHDRVVVRLESPGGMVHGYGLAAAQLVRLRDAGFNLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLLKQHNVDFEMYTAGQ 185          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: UPI001C11D58A (protease SohB n=2 Tax=Moraxellaceae TaxID=468 RepID=UPI001C11D58A)

HSP 1 Score: 137 bits (344), Expect = 6.790e-34
Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = 0
Query:  219 PQRRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            P  +VFV+ F       A        L E +S L++  N   DE ++ LESPGG V  +GLAAA+LVRL+D+G +LTVCVDKVAASGGYMMAC+AD+++ APFA++GSIGVV  + NF+K LK + VDY QFT+G+
Sbjct:   64 PSAQVFVLDFDGDMKASAVKH-----LREEISTLISTAN-KGDEVVIRLESPGGIVHGYGLAAAQLVRLRDAGLKLTVCVDKVAASGGYMMACVADKIVAAPFAVVGSIGVVSQLPNFHKWLKNHDVDYEQFTAGD 193          
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Match: UPI0003717366 (protease SohB n=1 Tax=Psychrobacter lutiphocae TaxID=540500 RepID=UPI0003717366)

HSP 1 Score: 136 bits (343), Expect = 1.130e-33
Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 0
Query:  221 RRVFVVSFRPGHSPEATMQKEMDLLSETVSFLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDKVAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQFTSGE 354
            +R+FV+ F       A        L E +S +++   I  DE +V LES GG V  +GLAAA+LVRLKD+G  LT+CVDK+AASGGYMMAC+AD+++ APFA++GSIGVV  M NFNK LKK+ +DY  FT+GE
Sbjct:   64 KRIFVLDFDGDIKASAVKH-----LREEISAIISTAKIG-DEVVVRLESGGGMVHSYGLAAAQLVRLKDAGLTLTICVDKIAASGGYMMACVADKILAAPFAVIGSIGVVSQMPNFNKWLKKHDIDYEMFTAGE 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9690.21326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G353_ECTSI5.460e-18584.33Putative periplasmic protease n=1 Tax=Ectocarpus s... [more]
A0A6H5KTD1_9PHAE2.390e-15585.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5C8C950_ACISP5.780e-3654.01Protease SohB n=1 Tax=Acinetobacter sp. TaxID=472 ... [more]
A0A1G6H1K4_9GAMM8.080e-3653.28Inner membrane peptidase. Serine peptidase. MEROPS... [more]
A0A1E7RAX4_9GAMM1.130e-3552.55Protease SohB n=1 Tax=Acinetobacter qingfengensis ... [more]
A0A1Z9YY75_9GAMM4.300e-3551.82Protease SohB n=2 Tax=Acinetobacter TaxID=469 RepI... [more]
A0A0E2GKY8_ACIRA1.640e-3451.09Peptidase S49 family protein n=8 Tax=Acinetobacter... [more]
A0A5C8BUH5_ACISP3.190e-3450.36Protease SohB n=1 Tax=Acinetobacter sp. TaxID=472 ... [more]
UPI001C11D58A6.790e-3453.68protease SohB n=2 Tax=Moraxellaceae TaxID=468 RepI... [more]
UPI00037173661.130e-3353.73protease SohB n=1 Tax=Psychrobacter lutiphocae Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002142Peptidase S49PFAMPF01343Peptidase_S49coord: 287..354
e-value: 2.2E-15
score: 56.9
IPR013703Peptidase S49, N-terminal proteobacteriaPFAMPF08496Peptidase_S49_Ncoord: 210..284
e-value: 2.0E-6
score: 27.9
NoneNo IPR availableGENE3D3.90.226.10coord: 253..349
e-value: 1.1E-16
score: 62.8
NoneNo IPR availablePANTHERPTHR42987:SF1PROTEASE SOHB-RELATEDcoord: 217..354
NoneNo IPR availablePANTHERPTHR42987FAMILY NOT NAMEDcoord: 217..354
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 260..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9690contigEcto-sp13_S_contig9690:366..6182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9690.21326.1mRNA_Ecto-sp13_S_contig9690.21326.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9690 366..6182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9690.21326.1 ID=prot_Ecto-sp13_S_contig9690.21326.1|Name=mRNA_Ecto-sp13_S_contig9690.21326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=357bp
MHAGKGGEEDSPASGSSGKSNGGKGTDKSNASLGVFGGLMKAFTHEDAHG
QHLDFHSMNDMFAKDAEALAVASGPKLDMPSLLAGSGGDDGGSSMVGLMK
AFKGLYGDKQEAKDRKSTRGGIHRTKKHGTRKGKRKHGSRKRSKREPESS
AASAGEGKKAAGEGKKAAGEENGERFVRESVLMGEKAGEETSIGDVSASA
SSQEGGSSNSTVTTSSGKPQRRVFVVSFRPGHSPEATMQKEMDLLSETVS
FLVAHGNITTDEAIVVLESPGGEVTEFGLAAARLVRLKDSGFRLTVCVDK
VAASGGYMMACIADELITAPFAMLGSIGVVGGMANFNKALKKYGVDYFQF
TSGETL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002142Peptidase_S49
IPR013703Peptidase_S49_N_proteobac
IPR029045ClpP/crotonase-like_dom_sf