prot_Ecto-sp13_S_contig9614.21234.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9614.21234.1
Unique Nameprot_Ecto-sp13_S_contig9614.21234.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: D7FSQ0_ECTSI (VDE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ0_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 6.360e-38
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 YVTGISTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTCS 69
            YVTG STDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVA+VAREHGIDP SMLAIDNTCS
Sbjct:  241 YVTGHSTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVARVAREHGIDPGSMLAIDNTCS 309          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A6H5JEL1_9PHAE (VDE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL1_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 1.420e-37
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = 0
Query:    1 YVTGISTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTCS 69
            YVTG STDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSM AIDNTCS
Sbjct:  398 YVTGHSTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMSAIDNTCS 466          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A835YUF5_9STRA (Violaxanthin de-epoxidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF5_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.540e-20
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 YVTGISTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            YV     +PG EFV V+YRGHTLQG+YDGGFVYAR+P LP+ A A V   AR  G+DP ++L IDN C
Sbjct:  243 YVAAAGAEPGAEFVLVRYRGHTLQGTYDGGFVYAREPALPQRAAAAVRDAARVAGLDPAALLPIDNAC 310          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A7S2BA43_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA43_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.030e-13
Identity = 33/68 (48.53%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    1 YVTGISTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            YV G +     EF F+ Y G TLQ +Y+G FVYAR+P LP+ A+  V K+ARE G+DP+    I N C
Sbjct:   70 YVIGENKPNEPEFKFIYYTGKTLQNTYNGAFVYARQPELPREAMNSVYKLAREAGMDPEKFCRIRNAC 137          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: W7TG78_9STRA (Violaxanthin de-epoxidase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG78_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 6.900e-12
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   12 EFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            ++ FV Y GHTLQG+Y+G FVYAR P LP   +  V++VAR +G+DP     I NTC
Sbjct:  390 DYKFVFYTGHTLQGNYEGAFVYARTPELPPELMPAVSQVARANGLDPSKFCKIRNTC 446          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A6U3VDS0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDS0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.240e-11
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    1 YVTGISTDPGE--EFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTCS 69
            Y+ G S   G+   F  V Y+GHTLQG+Y+G FVYA++  LP++A+  V + A + G+D D    IDNTCS
Sbjct:  310 YIIGESDGKGDIPAFKLVAYKGHTLQGNYEGSFVYAKERILPEAAVPAVREAAAKAGLDFDKFTRIDNTCS 380          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A7S4HQQ2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HQQ2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.700e-11
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0
Query:    1 YVTGISTDPGE--EFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            Y+ G S   G+   F  V Y+GHTLQG+Y+G FVYA++P LP++A   V  VA + G+D +    IDNTC
Sbjct:  305 YILGESDGKGDVPPFKLVAYKGHTLQGNYEGAFVYAKEPKLPEAAKQAVRDVAAKAGLDFEKFTRIDNTC 374          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A7S2CP62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CP62_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.260e-11
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    1 YVTGISTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            Y+ G +T    EF FV Y G TLQ  Y+G FVYAR P LPK  +A V ++A++ G++P     I N C
Sbjct:  339 YLIGENTPSEPEFKFVYYTGKTLQNRYNGAFVYARTPELPKETMASVYEIAQQAGLNPTKFCKIQNQC 406          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: A0A7S2HCA8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HCA8_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 8.140e-11
Identity = 32/70 (45.71%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 YVTGISTDPGE--EFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            Y+ G S   G+   F  V Y+GHTLQG+Y+G FVYA++  LP++A+  V   A + G+D D    IDNTC
Sbjct:  303 YIIGESDGKGDVPPFKLVAYKGHTLQGNYEGAFVYAKERILPEAAVPAVKDAAAKAGLDFDKFTRIDNTC 372          
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Match: K0R8I3_THAOC (VDE domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8I3_THAOC)

HSP 1 Score: 64.7 bits (156), Expect = 1.500e-10
Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   13 FVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAREHGIDPDSMLAIDNTC 68
            F  V Y+GHTLQG+Y+G FVYA++P +P +A+  V + A + G+D D    IDN C
Sbjct:  303 FKLVAYKGHTLQGNYEGAFVYAKEPIIPSAAIPAVKEAAAKAGLDFDKFTRIDNAC 358          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9614.21234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FSQ0_ECTSI6.360e-3895.65VDE domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JEL1_9PHAE1.420e-3797.10VDE domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YUF5_9STRA7.540e-2060.29Violaxanthin de-epoxidase-domain-containing protei... [more]
A0A7S2BA43_9STRA6.030e-1348.53Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7TG78_9STRA6.900e-1252.63Violaxanthin de-epoxidase n=4 Tax=Monodopsidaceae ... [more]
A0A6U3VDS0_9STRA1.240e-1146.48Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4HQQ2_9STRA1.700e-1147.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2CP62_9STRA3.260e-1145.59Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2HCA8_9STRA8.140e-1145.71Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K0R8I3_THAOC1.500e-1048.21VDE domain-containing protein n=1 Tax=Thalassiosir... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 1..69
e-value: 2.2E-22
score: 81.7
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 3..68
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 2..66
e-value: 8.5E-17
score: 61.5
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 10..68
NoneNo IPR availablePANTHERPTHR33970FAMILY NOT NAMEDcoord: 10..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9614contigEcto-sp13_S_contig9614:5690..6227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9614.21234.1mRNA_Ecto-sp13_S_contig9614.21234.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9614 5690..6227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9614.21234.1 ID=prot_Ecto-sp13_S_contig9614.21234.1|Name=mRNA_Ecto-sp13_S_contig9614.21234.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
YVTGISTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKV
AREHGIDPDSMLAIDNTCS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR010788VDE