prot_Ecto-sp13_S_contig12561.2121.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12561.2121.1
Unique Nameprot_Ecto-sp13_S_contig12561.2121.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length327
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12561.2121.1 vs. uniprot
Match: A0A6H5K3N2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3N2_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 1.320e-167
Identity = 286/326 (87.73%), Postives = 289/326 (88.65%), Query Frame = 0 
Query:    1 MNAPSARGGNGHVVFESTRIAEELVRGGVPPGSIIADFASWDTVGNAWFARMAVEAMLDMSFRHGDRANEHAAPPXXXXXXXPAASVAPSVLSPRKLPYPGSAVVAESGGAGEGESETAAAVGGVEEPGLFSARREAAAAGARGLTLKETKRADAAXXXXXXXXXXXXXXXXGNDGGEKLPAARAGEAYGGGEMRKWMYDWKNKKARARRGPMNLTVFVSDFHAERMDAVFQWVFGLEPSLLRGKTTVTTVSIETPVEMWARGGEQREARQAHEREAAEQARQRAREIRTVEEFRAFMMLGGHRGYFNLTHGRYQASSGGGWGGAS 326
            MNAPSARGGNGHV+FESTRIAEELVR                         MAVEAMLDMSFRHGDRANEHAAPPXXXX   PAA VAPSVLSPRKLPYPGSAVV ESGG GEGESETAAA+GGVEEPGLFSARREAAAA ARGLTLKETKRADA XXXXXXXXXXXXXXXX   GGEKLPAARAGEAYGGGEMRKWMYDWKNKKARARRGPMNLTVFVSDFHAERMDAVFQWVFGLEPSLLRGKTTVTTVSIETPVEMWARGGEQREARQAHEREAAEQARQRAREIRTVEEFRAFMMLGGHRGYF+LTHGRYQAS GGGWGGAS
Sbjct:  123 MNAPSARGGNGHVIFESTRIAEELVR-------------------------MAVEAMLDMSFRHGDRANEHAAPPXXXXA--PAAGVAPSVLSPRKLPYPGSAVVTESGGTGEGESETAAALGGVEEPGLFSARREAAAAAARGLTLKETKRADAXXXXXXXXXXXXXXXXXRKGGGEKLPAARAGEAYGGGEMRKWMYDWKNKKARARRGPMNLTVFVSDFHAERMDAVFQWVFGLEPSLLRGKTTVTTVSIETPVEMWARGGEQREARQAHEREAAEQARQRAREIRTVEEFRAFMMLGGHRGYFDLTHGRYQASPGGGWGGAS 421
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BLAST of mRNA_Ecto-sp13_S_contig12561.2121.1 vs. uniprot
Match: A0A7S2RKG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKG7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.030e-13
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    1 MNAPSARGGNGHVVFESTRIAEELVRGGVPPGSIIADFASWDTVGNAWFARMAVEAML 58
            MNAPSAR  +G + FES+ IA+ LVR GVPP +II DF SWDTV NAW  R+ VEA++
Sbjct:  134 MNAPSARTESGAIWFESSAIAQHLVRAGVPPEAIICDFVSWDTVANAWVTRLVVEALV 191
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12561.2121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3N2_9PHAE1.320e-16787.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RKG7_9STRA4.030e-1362.07Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12561contigEcto-sp13_S_contig12561:927..3430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12561.2121.1mRNA_Ecto-sp13_S_contig12561.2121.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12561 533..3430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12561.2121.1 ID=prot_Ecto-sp13_S_contig12561.2121.1|Name=mRNA_Ecto-sp13_S_contig12561.2121.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=327bp
MNAPSARGGNGHVVFESTRIAEELVRGGVPPGSIIADFASWDTVGNAWFA
RMAVEAMLDMSFRHGDRANEHAAPPPPPPPPAPAASVAPSVLSPRKLPYP
GSAVVAESGGAGEGESETAAAVGGVEEPGLFSARREAAAAGARGLTLKET
KRADAAAAAAAAAAAKSGAGAGGNDGGEKLPAARAGEAYGGGEMRKWMYD
WKNKKARARRGPMNLTVFVSDFHAERMDAVFQWVFGLEPSLLRGKTTVTT
VSIETPVEMWARGGEQREARQAHEREAAEQARQRAREIRTVEEFRAFMML
GGHRGYFNLTHGRYQASSGGGWGGAS*
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