prot_Ecto-sp13_S_contig12557.2117.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12557.2117.1
Unique Nameprot_Ecto-sp13_S_contig12557.2117.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length505
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12557.2117.1 vs. uniprot
Match: A0A6H5KM79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM79_9PHAE)

HSP 1 Score: 799 bits (2064), Expect = 3.960e-287
Identity = 402/432 (93.06%), Postives = 413/432 (95.60%), Query Frame = 0 
Query:   74 GPKGLTSLSAGSASVSPATYTTQPGERAVKEKAPAAVVNTLESRYLSPSTRCLTPSHEREAKGAQSPGPGVYYPLEAWDFGPPKHWNPIDKSDKPSRMLSSRSFNAKMTWGEATMPRPPNPAKAAQIPTKEERAWLSKRRGSARPSTAPRCMWLNGVSTRGGLQAWGDVATNAGPIHVGNKGNCASPWDRPTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDLTRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSKAATVKAFVASAKGRAASDEKSSGAKNGMVRGGDRQSRPSTAPAQRLSIPLKGRESPGPAYALPSDFDQNFVNKKTFRPPRSSGTSPFGTEEPRGTGRSANLAPRADENGHVRAKKMKRLPKARREASSGPVAKSGRADAISRALGVPVNTCMGRGILLRIRADGM 505
            G  GLTSLSAG+A VSPATYTTQPGERAVKEKAPAAVVNTLESRYLSPSTRCLTPSHEREAKGAQSPGP VYYP EAWDFGPPKHWN ++KSDKP RM SSRSFNAK+TWGEATMPRPPNP KAAQIPTKEERAWLSKRRG+ARPSTAPRCMWLNGV+TRGGLQAWGDVATN GPIHVGNKGNCASPWDRPTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDLTRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSKAATV A VASAKGRAAS EK+SGAKNGMVRGGDRQSRPSTAP+QRLSIPLKGRESPGPAYALPSDFDQ FVNKKTF PPR +GTSPFGTEEPRGTGRSANLAPRADE+GHVRAK+ KRLPKARREASSGPVAKSGR DAI RALGVPVNTCMGRGILLRIRADGM
Sbjct:  107 GTAGLTSLSAGNAFVSPATYTTQPGERAVKEKAPAAVVNTLESRYLSPSTRCLTPSHEREAKGAQSPGPAVYYPHEAWDFGPPKHWNRVNKSDKPGRMPSSRSFNAKVTWGEATMPRPPNPVKAAQIPTKEERAWLSKRRGTARPSTAPRCMWLNGVNTRGGLQAWGDVATNTGPIHVGNKGNCASPWDRPTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDLTRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSKAATVNAMVASAKGRAASYEKTSGAKNGMVRGGDRQSRPSTAPSQRLSIPLKGRESPGPAYALPSDFDQKFVNKKTFHPPRCTGTSPFGTEEPRGTGRSANLAPRADEDGHVRAKQTKRLPKARREASSGPVAKSGRVDAIGRALGVPVNTCMGRGILLRIRADGM 538
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12557.2117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KM79_9PHAE3.960e-28793.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12557contigEcto-sp13_S_contig12557:225..3427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12557.2117.1mRNA_Ecto-sp13_S_contig12557.2117.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12557 225..3427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12557.2117.1 ID=prot_Ecto-sp13_S_contig12557.2117.1|Name=mRNA_Ecto-sp13_S_contig12557.2117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=505bp
MVLFGAYHTAERFFDDDRLTSHFPGPGSYSLKSTVEGVSTSRYARKLVED
GSVRPDGSAILFRERDCWVRGGEGPKGLTSLSAGSASVSPATYTTQPGER
AVKEKAPAAVVNTLESRYLSPSTRCLTPSHEREAKGAQSPGPGVYYPLEA
WDFGPPKHWNPIDKSDKPSRMLSSRSFNAKMTWGEATMPRPPNPAKAAQI
PTKEERAWLSKRRGSARPSTAPRCMWLNGVSTRGGLQAWGDVATNAGPIH
VGNKGNCASPWDRPTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDL
TRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSKAATVKAFVAS
AKGRAASDEKSSGAKNGMVRGGDRQSRPSTAPAQRLSIPLKGRESPGPAY
ALPSDFDQNFVNKKTFRPPRSSGTSPFGTEEPRGTGRSANLAPRADENGH
VRAKKMKRLPKARREASSGPVAKSGRADAISRALGVPVNTCMGRGILLRI
RADGM
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