prot_Ecto-sp13_S_contig9563.21171.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9563.21171.1
Unique Nameprot_Ecto-sp13_S_contig9563.21171.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length316
Homology
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: D8LPR5_ECTSI (Pex2_Pex12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR5_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 2.610e-155
Identity = 260/327 (79.51%), Postives = 264/327 (80.73%), Query Frame = 0
Query:    1 MDMLASSALEVDSSLPSFFEMFMTQQVEQSLKPAARHAH----------------------SALALRWPSLHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRRCRYGPKSGPPGPPTRQPASSDAEHDAHVAFDLNGAGYGQGQGLRGRDRRKALLTAAALPYLLAKLDAGHERSLAARAYGRLPRPSPQDEEPAVDGAATAARRNSSVRENNSDDAVHGGGDGGVGAGRXXXRESXXSRRGFXXXXXXXRAEARRRFFALHQLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEA 305
            MDMLASSALE DSSLPSFFEMFMTQQVEQSLKPAARHAH                      SALALRWPSLHRLSPWFDEAFL LSLLVEAKFLS HSSLLSESFYGLRRCRYGPKSGPPGPPT QPASSDAEHDAHVAFDLNGAGYGQGQGLR RDRRKALL  AALPYLLAKLDAGHERSLAARAYG LPRP+PQDEEPAVDGAA +ARRNSSVR +N+DD VHGG DG      XXX   XX     XXXXXXX               FQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEA
Sbjct:    1 MDMLASSALEADSSLPSFFEMFMTQQVEQSLKPAARHAHRHQTSKHAPLCLCRYYVMLFAISALALRWPSLHRLSPWFDEAFLVLSLLVEAKFLSKHSSLLSESFYGLRRCRYGPKSGPPGPPTPQPASSDAEHDAHVAFDLNGAGYGQGQGLRARDRRKALLMTAALPYLLAKLDAGHERSLAARAYGGLPRPTPQDEEPAVDGAAASARRNSSVRGSNTDDGVHGGSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQEDAEA 327          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: A0A7S2UT60_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT60_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.980e-13
Identity = 40/97 (41.24%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 MDMLASSALEVDSSLPSFFEMFMTQQVEQSLKPAARHAHSALALRWP-SLHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRRCRYGPKSG 96
            MDM  S      S++P++FEMF+ ++++Q LKPAA H  S L  RWP +L  L+  FDEA+ A+S  V+   L ++  LL+E  YGL+R +   + G
Sbjct:    1 MDMFISHVEVPGSTMPTYFEMFIEERIDQGLKPAAHHILSVLCERWPGALAGLASRFDEAYAAISAAVQGACLRSNDCLLAEYLYGLQRFKKRARGG 97          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: F0ZA90_DICPU (Peroxin-12 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZA90_DICPU)

HSP 1 Score: 63.5 bits (153), Expect = 1.380e-7
Identity = 70/317 (22.08%), Postives = 125/317 (39.43%), Query Frame = 0
Query:   12 DSSLPSFFEMFMTQQVEQSLKPAARHAHSALALRWPSLHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRRCRYGPKSGPPGPPT-----RQPASSDAEHDA----------HVAFDL-------NGAGYGQGQGLRGRDRRKALLTAAALPYLLAKLDAGHER-SLAARAYGRLPRPSPQDEEPAVDGAATAARRNSSVRENNSDDAVHGGGDGGVGAGRXXXRESXXSRRGFXXXXXXXRAEARRRFFA-------LHQLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIED 298
            D + PSFFEM    Q+  S KPA ++  + L+ R P L  +  ++DE F +L LL+E  +L  +    SE+FY L+R +    S   G        R   +  ++HD             +F +       + A   +   ++  DR ++L+    +PY+ +KLD  +++ S      G     +   E    +G  +       +     D  +               +     +          R    +R F        L  +F +VYP + A YE    +YQ LYL+  + +++P   L  + ++R   +D
Sbjct:   10 DPNRPSFFEMLNQFQMMPSFKPALKYIFTVLSQRNPKLRYIVNYYDECFYSLLLLLEYHYLKYYEGSFSENFYNLKRIKSSKSSSVDGDTVFSLLKRLVVTPKSDHDQPELLTKSQILKKSFAMLRRNRAASAASLKEDHSIKDSDRAESLIYLVVIPYIKSKLDEYYKKESDPLMELGLYDEDNDDHERRVSNGTISDQIERERLELVELDQKLQ-------------LQHETRLKIYIRLKKLKLRYLLFKRLFGSSSILKKLKTIFLKVYPFVNAIYEALFFIYQLLYLYEYTNYYTPFFHLQSIQLKRLNHKD 313          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: PEX12_DICDI (Putative peroxisome assembly protein 12 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PEX12_DICDI)

HSP 1 Score: 60.1 bits (144), Expect = 1.880e-6
Identity = 34/109 (31.19%), Postives = 53/109 (48.62%), Query Frame = 0
Query:   12 DSSLPSFFEMFMTQQVEQSLKPAARHAHSALALRWPSLHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRRCRYGPKSGPPGPPTRQPASSDAEHDAHVAFDL 120
            D + PSFFEM    Q+  S KPA ++  + L+ R P    +  ++DE F +L LL+E  +L  +    SE+FY L+R +              P +++A  D    F L
Sbjct:   11 DPNRPSFFEMLNQHQMMPSFKPALKYIFTVLSQRNPKFRYIVNYYDECFYSLLLLLEYHYLKYYEGSFSENFYNLKRIK--------------PRNNNANGDGDTLFSL 105          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: A0A151Z7L7_9MYCE (Peroxin-12 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z7L7_9MYCE)

HSP 1 Score: 58.2 bits (139), Expect = 7.440e-6
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   12 DSSLPSFFEMFMTQQVEQSLKPAARHAHSALALRWPSLHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRRCRYGPKSG 96
            D + PSFFEMF   Q+  S KPA ++  + L+ R      +  ++DE F ++ LL+E  +L  +    SE+FY L+R +   K G
Sbjct:   10 DPNRPSFFEMFAQFQMMPSFKPALKYIFTVLSQRNSKFLYIVKYYDECFYSMLLLLEYHYLKYYEGSFSENFYNLKRVKSEDKKG 94          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: J3JYU8_DENPD (Peroxisome assembly protein 12 n=3 Tax=Dendroctonus ponderosae TaxID=77166 RepID=J3JYU8_DENPD)

HSP 1 Score: 55.8 bits (133), Expect = 3.290e-5
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0
Query:   16 PSFFEMFMTQQVEQSLKPAARHAHSALALRWPS-LHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRR 88
            PS FE+   Q +  +L PA +     L+ ++P  L  L  +++EAFLALS L++  +L NH    SE+FYGL+R
Sbjct:   16 PSIFEVLAQQSLTDTLYPALQKVALFLSAKFPEKLGFLDAYYNEAFLALSGLLQFYYLKNHDGSFSENFYGLKR 89          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: A0A5D6Y815_9STRA (Peroxin-12 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y815_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.450e-5
Identity = 56/163 (34.36%), Postives = 73/163 (44.79%), Query Frame = 0
Query:  136 RRKALLTAAALPYLLAKLDAGHERSLAARAYGRLPRPSPQDEEPAVDGAATAARRNSSVRENNSDDAVHGGGDGGVGAGRXXXRESXXSRRGFXXXXXXXRAEARRRFFALHQLFFQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIED 298
            RR++LL A  LPY+ AKLD  + R+L       LPR  P          A+AAR  S       D +  G G      GR     +      F       R +  +  F L + F Q YP    +YEGS  +YQWLYLF  + +FSP LR   +V+ R T  D
Sbjct: 1094 RRQSLLYAVMLPYVKAKLD-NYFRTL----QETLPRTMP------ATPTASAARSQSEA-----DGSERGNG------GRALVAVARARMNVFLQ-----RLQQLQVLFRLKRAFLQAYPFAHFAYEGSFFLYQWLYLFGDTPYFSPLLRRMKIVLVRVTAAD 1229          
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Match: A0A7S1LPF8_NEODS (Peroxisome assembly protein 12 n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1LPF8_NEODS)

HSP 1 Score: 55.1 bits (131), Expect = 7.160e-5
Identity = 31/88 (35.23%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    1 MDMLASSALEVDSSLPSFFEMFMTQQVEQSLKPAARHAHSALALRWPSLHRLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRR 88
            M++L  S   VD+ LP+ FE+    ++  SL  A + A ++LA   P L     WFDE +L    L++  FLS+  + ++E  +GLRR
Sbjct:   20 MELLLLSQFNVDTPLPTVFELVAQDRLGDSLHGAFKFALTSLAQSVPRLAPAVHWFDEGYLVFDGLLQHLFLSHVGATMAEHAFGLRR 107          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9563.21171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LPR5_ECTSI2.610e-15579.51Pex2_Pex12 domain-containing protein n=2 Tax=Ectoc... [more]
A0A7S2UT60_9STRA1.980e-1341.24Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0ZA90_DICPU1.380e-722.08Peroxin-12 n=1 Tax=Dictyostelium purpureum TaxID=5... [more]
PEX12_DICDI1.880e-631.19Putative peroxisome assembly protein 12 n=1 Tax=Di... [more]
A0A151Z7L7_9MYCE7.440e-635.29Peroxin-12 n=1 Tax=Tieghemostelium lacteum TaxID=3... [more]
J3JYU8_DENPD3.290e-540.54Peroxisome assembly protein 12 n=3 Tax=Dendroctonu... [more]
A0A5D6Y815_9STRA6.450e-534.36Peroxin-12 n=1 Tax=Pythium brassicum TaxID=1485010... [more]
A0A7S1LPF8_NEODS7.160e-535.23Peroxisome assembly protein 12 n=1 Tax=Neobodo des... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006845Pex, N-terminalPFAMPF04757Pex2_Pex12coord: 25..298
e-value: 1.2E-28
score: 100.2
IPR017375Peroxisome assembly protein 12PANTHERPTHR12888PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12coord: 4..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9563contigEcto-sp13_S_contig9563:152..2723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9563.21171.1mRNA_Ecto-sp13_S_contig9563.21171.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9563 152..2723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9563.21171.1 ID=prot_Ecto-sp13_S_contig9563.21171.1|Name=mRNA_Ecto-sp13_S_contig9563.21171.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MDMLASSALEVDSSLPSFFEMFMTQQVEQSLKPAARHAHSALALRWPSLH
RLSPWFDEAFLALSLLVEAKFLSNHSSLLSESFYGLRRCRYGPKSGPPGP
PTRQPASSDAEHDAHVAFDLNGAGYGQGQGLRGRDRRKALLTAAALPYLL
AKLDAGHERSLAARAYGRLPRPSPQDEEPAVDGAATAARRNSSVRENNSD
DAVHGGGDGGVGAGRGGARESGSSRRGFSGSARRARAEARRRFFALHQLF
FQVYPLLRASYEGSCLVYQWLYLFRRSAFFSPALRLTGMVVRRATIEDWQ
EDAEAAAAAAAATAVA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006845Pex_N
IPR017375PEX12