prot_Ecto-sp13_S_contig955.21158.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig955.21158.1
Unique Name	prot_Ecto-sp13_S_contig955.21158.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	317

Homology

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: D7G880_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G880_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 6.130e-102
Identity = 308/316 (97.47%), Postives = 311/316 (98.42%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLHLKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNPVADPKQTGGSASGYTAEQDMTSSIDETR 316
            MFVKKDTRKIPDIL DEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVL LKRL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVD+EAAWGRADPVTGKLDPATVDSPRKTEVVIRGNP+ADPKQ GGSASGYTAEQDMTS +DETR
Sbjct:    1 MFVKKDTRKIPDILADEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNPIADPKQAGGSASGYTAEQDMTSLMDETR 316

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A835YNM3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM3_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.240e-36
Identity = 72/124 (58.06%), Postives = 91/124 (73.39%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALS--ATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLHLKR 122
            MF+KKD RKI +IL D  D REEL LGRRS EF   G++V+CS  +IP L +L+ LS+YDN+L+ ++G+G L   AT L HLNLGRNQL++LP ELG V TLETLW+DDN + +FP  V  L R
Sbjct:    1 MFIKKDLRKINEILADREDSREELRLGRRSGEF-KGGLRVICSPHNIPALAQLRSLSVYDNLLTSIEGVGLLGNGATALLHLNLGRNQLRTLPQELGLVSTLETLWLDDNLLDEFPLPVTELTR 123

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A1V9YVQ5_9STRA (Membrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVQ5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.390e-28
Identity = 63/120 (52.50%), Postives = 82/120 (68.33%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLHL 120
            MFV KD RKIP I+ DE D REEL LGRRS+EF  + +KV+CS  ++P    L++LSLYDN L  V  IG L+ +PL+ L++G N L SLP E+G +  LE LWV +NA+   P S+L L
Sbjct:    1 MFVVKDLRKIPVIMLDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLQSVDRIGILANSPLQVLDIGYNLLTSLPTEIGTLKNLEELWVTNNALESIPESILEL 119

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: W4FL85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL85_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.430e-28
Identity = 58/105 (55.24%), Postives = 78/105 (74.29%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWV 105
            MFV KD RK+P+I+ D  D+RE+L LGRRS+EF  N ++++CS  +IP   +LQKLSLYDN LS + GIG LS+TPL  L+LG+NQL  LP E+G +  L+ LW+
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEIGSLRHLKELWL 104

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A485L9Z5_9STRA (Aste57867_17909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.950e-27
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDD 107
            MFV KD RKIP+IL D  DERE++ LGRRS+EF  N + V+C+  ++  L KLQKLSLYDN L  ++ IG LS TPL  L+LG+NQL+ LP E+G + TL+ LWV +
Sbjct:    1 MFVVKDLRKIPEILQDPEDEREQMRLGRRSAEFSGN-LDVLCTPSNVTALTKLQKLSLYDNQLVSIERIGLLSKTPLCILDLGQNQLERLPDEIGSITTLKELWVSN 106

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A067CJY8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJY8_SAPPC)

HSP 1 Score: 116 bits (291), Expect = 6.760e-27
Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDN 108
            MFV+KD RKIP I+ DE D REEL LGRRS+EF+ N +KV+CS  ++P    L++LSLYDN L  V  IG L+ TPL  L+LG N L SLP E+G +  LE LWV +N
Sbjct:    1 MFVQKDLRKIPAIMVDENDTREELRLGRRSAEFLGN-LKVLCSLDNLPAFGNLRRLSLYDNQLHSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: W4FJA0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJA0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.590e-26
Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPE-------------------------LGKVGTLETLWVDDNAITDFPRSVLHLKRL 123
            MFV KD RK+P+I+ D  D+RE+L LGRRS+EF  N ++++CS  +IP   +LQKLSLYDN LS + GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW+ +N +T  P SVL L  L
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 147

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A6G0WAD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.600e-26
Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVL 118
            MFV KD RKIPDI+ D+ D RE+L LGRR++EF  + + ++C+  ++    KLQKLSLYDN L  ++ IG L+ TPL  L+LG+NQL+SLP E+G +  L+ LWV +N +     +VL
Sbjct:    1 MFVVKDLRKIPDIVRDDNDTREQLRLGRRAAEFQGD-LSILCTPSNVAAFSKLQKLSLYDNNLHSIERIGLLAETPLAILDLGQNQLESLPDEMGTLVHLKELWVTNNKLMTISEAVL 117

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A1V9YE43_9STRA (Leucine rich repeat protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YE43_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.890e-25
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDN 108
            MFV KD RKIP I+ DE D REEL LGRRS+EF  + +KV+CS  ++P    L++LSLYDN L  V  IG L+ TPL  L+LG N L SLP E+G +  LE LWV +N
Sbjct:    1 MFVVKDLRKIPAIMVDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLRSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107

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BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Match: A0A3R7BQF1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BQF1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 5.940e-25
Identity = 65/148 (43.92%), Postives = 88/148 (59.46%), Query Frame = 0

Query:    1 MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPE-------------------------LGKVGTLETLWVDDNAITDFPRSVLHLKRL 123
            MFV KD RK+P+I+ D  D+RE+L LGRRS+EF  N ++++CS  +IP   +LQKLSLYDN L+ + GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW+ +N +T  P SVL L  L
Sbjct:  358 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLTSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 504

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig955.21158.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
D7G880_ECTSI	6.130e-102	97.47	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A835YNM3_9STRA	1.240e-36	58.06	Leucine rich repeat protein n=1 Tax=Tribonema minu...	[more]
A0A1V9YVQ5_9STRA	2.390e-28	52.50	Membrane protein n=1 Tax=Thraustotheca clavata Tax...	[more]
W4FL85_9STRA	4.430e-28	55.24	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A485L9Z5_9STRA	4.950e-27	56.07	Aste57867_17909 protein n=1 Tax=Aphanomyces stella...	[more]
A0A067CJY8_SAPPC	6.760e-27	56.48	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
W4FJA0_9STRA	1.590e-26	44.59	Uncharacterized protein n=2 Tax=Aphanomyces astaci...	[more]
A0A6G0WAD8_9STRA	2.600e-26	49.15	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A1V9YE43_9STRA	1.890e-25	55.56	Leucine rich repeat protein n=1 Tax=Achlya hypogyn...	[more]
A0A3R7BQF1_9STRA	5.940e-25	43.92	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00364	LRR_bac_2	coord: 120..139 e-value: 42.0 score: 8.9 coord: 189..208 e-value: 7.8 score: 14.5 coord: 97..116 e-value: 150.0 score: 4.7 coord: 77..94 e-value: 290.0 score: 2.6 coord: 212..232 e-value: 35.0 score: 9.6 coord: 166..185 e-value: 390.0 score: 1.6
None	No IPR available	PANTHER	PTHR16083:SF19		coord: 47..216
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 47..216
None	No IPR available	PANTHER	PTHR16083:SF19		coord: 133..255
None	No IPR available	PANTHER	PTHR16083	LEUCINE RICH REPEAT CONTAINING PROTEIN	coord: 133..255
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 36..253
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 143..165 e-value: 34.0 score: 8.9 coord: 212..234 e-value: 11.0 score: 12.9 coord: 189..211 e-value: 31.0 score: 9.3 coord: 166..187 e-value: 46.0 score: 7.8 coord: 77..97 e-value: 16.0 score: 11.5 coord: 50..72 e-value: 23.0 score: 10.3 coord: 235..258 e-value: 52.0 score: 7.4 coord: 120..142 e-value: 0.36 score: 19.9
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 22..289 e-value: 1.6E-51 score: 176.7
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 99..155 e-value: 6.2E-8 score: 32.3
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 77..92 e-value: 1.2 score: 10.0
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 76..97 score: 7.196
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 122..143 score: 7.55
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 99..121 score: 6.387
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 168..189 score: 6.264
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 214..236 score: 5.756
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 52..73 score: 7.003
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 145..166 score: 5.856
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 237..258 score: 6.541
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 191..212 score: 7.027

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig955	contig	Ecto-sp13_S_contig955:2128..8848 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig955.21158.1	mRNA_Ecto-sp13_S_contig955.21158.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig955 2055..9016 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig955.21158.1 ID=prot_Ecto-sp13_S_contig955.21158.1|Name=mRNA_Ecto-sp13_S_contig955.21158.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
MFVKKDTRKIPDILTDEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRL
QKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTL
ETLWVDDNAITDFPRSVLHLKRLQELRLSGNRISEVPEEIAALSELRLLA
LDNNEVKTVPNSIGKLSHLHSLLLRQNELEELPGEVGVLLDLKTLSVSSN
RLVSLPSSIGQLVLLEFLFANGNRLQSLPPELAGLMKLRKANLSNNSIHS
LPVDLEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNPVADPKQTGGSAS
GYTAEQDMTSSIDETR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt