prot_Ecto-sp13_S_contig1255.2113.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1255.2113.1
Unique Nameprot_Ecto-sp13_S_contig1255.2113.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: D7FZH9_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH9_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 2.300e-62
Identity = 103/151 (68.21%), Postives = 123/151 (81.46%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSFITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLL 151
            GVPS+ I LN  VVVMLCRN+SID+ L NGTKVVV+ I P  L+++TLD  G + WLPR+AF+F+T QGVAVKRVQFP+RLCFC+TVHRAQGQTLD+TC DL     A+GHLYVGLSRVRK+DD++I TT DRID D  A V N+VF+SLL
Sbjct:  499 GVPSHDINLNVGVVVMLCRNLSIDDCLTNGTKVVVVAIQPFTLKLQTLD-HGKMFWLPRIAFNFVTDQGVAVKRVQFPVRLCFCLTVHRAQGQTLDKTCIDLTRHPFAHGHLYVGLSRVRKSDDIIILTTSDRIDGDVFAKVHNVVFKSLL 648          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: A0A6H5KSD8_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD8_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.630e-46
Identity = 87/152 (57.24%), Postives = 103/152 (67.76%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSFITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLLP 152
            G+PS+ I L   VVV LCRNMSID RL NGTKVVV +I    L+VK L                    GVAVKR+ FP+RL FC+TVHRAQGQTLD+TCFDL     A+GHLYVGLSRVRKADD++I TT DR++  G A V N+++ SLLP
Sbjct:  438 GIPSHEIKLKVGVVVRLCRNMSIDARLTNGTKVVVQEIQSYTLRVKNLK------------------DGVAVKRIHFPVRLWFCLTVHRAQGQTLDKTCFDLTRHPFAHGHLYVGLSRVRKADDVIILTTPDRVNDYGFAKVNNVLYNSLLP 571          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: A0A6H5J9S3_9PHAE (Herpes_Helicase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S3_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 2.260e-41
Identity = 73/136 (53.68%), Postives = 93/136 (68.38%), Query Frame = 0
Query:   16 MLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSFITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLL 151
            ML RN+ I   L N TK+VVL I    L+ K L  +G  H++PR+ F FIT QGVAVKRVQFP+RLCF IT+H++QGQTLD+  FD   D   +G LYV LSRVR A+D+ I     R+ +DG A V N+V++SLL
Sbjct:    1 MLTRNLDISNGLCNSTKLVVLHITNFTLRAKNLK-DGVEHFIPRITFGFITRQGVAVKRVQFPVRLCFAITIHKSQGQTLDKVLFDNRTDVFMHGCLYVALSRVRAANDIRILVEPCRVSADGFARVLNVVYKSLL 135          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: A0A6J1TE18_FRAOC (ATP-dependent DNA helicase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TE18_FRAOC)

HSP 1 Score: 111 bits (278), Expect = 5.100e-28
Identity = 59/153 (38.56%), Postives = 95/153 (62.09%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSFITWQGVAVK--RVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLL 151
            GVP++ + L    V M+ RN+++ ERL NGTKV+V  I+P ++ V+    +  +  +PR+ F F   +G  ++  R QFP+++C+ +TVH++QGQT+ +   DL  D   +G LYV LSR R++DD+ +    DR   D    V+NIV++ LL
Sbjct:   38 GVPNHILDLKIGAVCMIMRNLNMSERLVNGTKVIVEGISPRLVTVRKPGTQELIA-IPRILFRFPVLEGSPLQMCRRQFPLQVCYGMTVHKSQGQTIFKVGLDLRSDCFTHGQLYVALSRTRRSDDVTVLGAPDRC-VDNITYVRNIVYQELL 188          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: A0A6P8ZK23_THRPL (ATP-dependent DNA helicase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZK23_THRPL)

HSP 1 Score: 117 bits (292), Expect = 1.760e-27
Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSFITWQG--VAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLL 151
            GVP + + L    V  + RN++I+E L NGTKVVV  ++P I++V+      T   +PR+ F F    G  + + R QFP++L + ++ H++QGQT+++   DL  D   +G LYVGLSRVR  DD+V+    DRI  DG A  +NIV+ +LL
Sbjct:  803 GVPDHILKLKIGAVCFITRNLNIEEGLVNGTKVVVEAVSPRIVRVRKAGGNETFA-IPRITFKFPIVDGAPLMINRRQFPLQLAYAMSFHKSQGQTINKVGVDLRTDCFTHGQLYVGLSRVRSPDDIVVLVPHDRIH-DGVAYTKNIVYHNLL 953          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: UPI001ED89BAA (ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED89BAA)

HSP 1 Score: 109 bits (273), Expect = 5.100e-25
Identity = 57/152 (37.50%), Postives = 96/152 (63.16%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSF-ITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLL 151
            GVP + + L    V +L RN+S ++RL NGTKV+V  I+   ++ +  +A  TV  +PR+ F F ++  G+ + R QFP+++ + +T++++QGQTL++   DL  D  ++G LYV L RVR  +D+ +  T +R+ +D  A+  NIV + LL
Sbjct:  431 GVPDHILELKVGCVAILIRNISFEDRLVNGTKVIVEKISRRFIEARIPNATDTVM-IPRIPFKFAVSNSGIEMIRKQFPLKVAYGVTINKSQGQTLEKVGVDLRSDVFSHGQLYVALGRVRSVNDVKVLVTENRVSND-RAHTINIVMKELL 580          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: A0A6C0JPF3_9ZZZZ (Helitron_like_N domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JPF3_9ZZZZ)

HSP 1 Score: 107 bits (267), Expect = 4.240e-24
Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFSFIT--WQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRI--DSDGH--ANVQNIVFESLL 151
            GVP + + L    + +L RN+S  + L N T+V ++ +    +QV+TL   G    +PR+ F F     Q   ++R QFP+RL +C+++++AQGQ +D    DL     A+GHLYVGLSRVR+A  + IFT  D     S G   A V+N+V+  LL
Sbjct: 1415 GVPPHDLPLCVGDICILQRNLSKKDGLTNNTRVQIIGLRTYSIQVRTLGEHGKAAAIPRIRFKFRLPFGQSFQLRRTQFPLRLAYCMSLNKAQGQEMDTNLLDLRNPVFAHGHLYVGLSRVREASKIAIFTNEDLTFKTSSGSIVAIVKNVVYPELL 1571          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: UPI00103A3A51 (uncharacterized protein LOC114364057 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A3A51)

HSP 1 Score: 103 bits (258), Expect = 6.660e-23
Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDAEGTVHWLPRVAFS--FITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLL 151
            GVP + + L    V M+ RN+S  +RL NGTKV+V+   P I+ V+    E     +PR+ F         + + R QFP+ LC+ +TVH++QGQT++R   DL  D  ++G LYV L RV++  D+ I  +RD++  D    + N+V+  LL
Sbjct:  930 GVPEHDLKLKVGCVCMIIRNLSFSDRLVNGTKVIVVKTTPRIIIVRK-PGETNEFLIPRILFKAPIEPDSPIEMTRRQFPLALCYAMTVHKSQGQTINRVGVDLRSDVFSHGQLYVALGRVQEKSDIKILVSRDKL-IDNKLLLNNVVYPQLL 1080          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: UPI001D00704D (uncharacterized protein LOC123270113 n=1 Tax=Cotesia glomerata TaxID=32391 RepID=UPI001D00704D)

HSP 1 Score: 103 bits (257), Expect = 8.990e-23
Identity = 54/150 (36.00%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    3 PSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTL--DAEGTVHWLPRVAFSFITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESL 150
            P + + L K+ +VML RN+++ E L NGT+++VLD++  +L+   L  D  G + ++ R+            KR QFPI++ FC+T+++AQGQT DR   DL  D   +G LYV LSRVR    + ++ + ++ ++    +V+N VF+ L
Sbjct:  836 PPHKLRLRKNTIVMLIRNLNLSEGLCNGTRLMVLDLSTNVLRCNILTGDKAGEIVFINRITLYCDNVYPFTFKRRQFPIKIAFCMTINKAQGQTFDRIAIDLTKDVFNHGQLYVALSRVRSWQSLNLYLSSEKEEN----SVKNFVFKKL 981          
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Match: UPI00051BF8C0 (ATP-dependent DNA helicase PIF1-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI00051BF8C0)

HSP 1 Score: 99.0 bits (245), Expect = 8.970e-22
Identity = 55/157 (35.03%), Postives = 91/157 (57.96%), Query Frame = 0
Query:    1 GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVK--TLDAEGTVHWLPRVAFSFITWQGVAV--KRVQFPIRLCFCITVHRAQGQTLDRTCFDLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESLLPK 153
            G+P + + L K   VML RN+++ E L NGT+++  D+   ++  K  T D + T  ++PR+ F   T + + +  KR QFP+RLCF +T+++AQGQTLD     L     ++G LYV LSR + ++ + +       DSD   +  NIV++ ++ K
Sbjct:  196 GLPPHKLTLKKYCPVMLLRNLNLCEGLYNGTRLISCDLRKHVINAKIATGDFKNTHVFIPRIPFLSSTDEKLPIPFKRTQFPLRLCFAMTINKAQGQTLDFVGVYLREPVFSHGQLYVALSRAKSSNCVKLLIRPPTSDSDDDHSTYNIVYDEIIQK 352          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1255.2113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZH9_ECTSI2.300e-6268.21ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KSD8_9PHAE2.630e-4657.24ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5J9S3_9PHAE2.260e-4153.68Herpes_Helicase domain-containing protein n=1 Tax=... [more]
A0A6J1TE18_FRAOC5.100e-2838.56ATP-dependent DNA helicase n=1 Tax=Frankliniella o... [more]
A0A6P8ZK23_THRPL1.760e-2741.18ATP-dependent DNA helicase n=1 Tax=Thrips palmi Ta... [more]
UPI001ED89BAA5.100e-2537.50ATP-dependent DNA helicase PIF1-like n=2 Tax=Ischn... [more]
A0A6C0JPF3_9ZZZZ4.240e-2438.85Helitron_like_N domain-containing protein n=1 Tax=... [more]
UPI00103A3A516.660e-2337.25uncharacterized protein LOC114364057 n=1 Tax=Ostri... [more]
UPI001D00704D8.990e-2336.00uncharacterized protein LOC123270113 n=1 Tax=Cotes... [more]
UPI00051BF8C08.970e-2235.03ATP-dependent DNA helicase PIF1-like n=1 Tax=Nicot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 9..131
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 9..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1255contigEcto-sp13_S_contig1255:9146..9607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1255.2113.1mRNA_Ecto-sp13_S_contig1255.2113.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1255 9146..9607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1255.2113.1 ID=prot_Ecto-sp13_S_contig1255.2113.1|Name=mRNA_Ecto-sp13_S_contig1255.2113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
GVPSNAIGLNKDVVVMLCRNMSIDERLPNGTKVVVLDINPLILQVKTLDA
EGTVHWLPRVAFSFITWQGVAVKRVQFPIRLCFCITVHRAQGQTLDRTCF
DLLLDASAYGHLYVGLSRVRKADDMVIFTTRDRIDSDGHANVQNIVFESL
LPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase