prot_Ecto-sp13_S_contig9520.21132.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9520.21132.1
Unique Name	prot_Ecto-sp13_S_contig9520.21132.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	188

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9520.21132.1 vs. uniprot
Match: A0A6H5K573_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K573_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 3.460e-89
Identity = 139/150 (92.67%), Postives = 139/150 (92.67%), Query Frame = 0

Query:   39 MVNGLRLTTFLFVMVALVALPNTRGTAVAEVAPAAPLGLYYEQWQQKQTEQTKLPLHLDFTSPINGTRVEGPNVFLHYKIFNTLENRELTSTEVRDLSVSTTVCFKLHGFNDVPEICAPLRVTTVTIKDALPAKWHHVTGSIKDTRTGKL 188
            MVNGLRLTT LFV VALVAL NTRGTAVAE APAAP GL YEQWQQKQ EQTKLPLHL FTSPINGTRVEGPNVFLHYKIFNTLENRELTS EVRDLSVSTTVCFKLHGFNDVPEICAPLRV TVTIKDALPAKWHHVTGSIKDT TGKL
Sbjct:    1 MVNGLRLTTLLFVRVALVALSNTRGTAVAEAAPAAPRGLDYEQWQQKQAEQTKLPLHLGFTSPINGTRVEGPNVFLHYKIFNTLENRELTSAEVRDLSVSTTVCFKLHGFNDVPEICAPLRVATVTIKDALPAKWHHVTGSIKDTSTGKL 150

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9520.21132.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9520.21132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5K573_9PHAE	3.460e-89	92.67	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 60..188
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..59
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..41
None	No IPR available	TMHMM	TMhelix		coord: 40..59

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9520	contig	Ecto-sp13_S_contig9520:4677..5240 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9520.21132.1	mRNA_Ecto-sp13_S_contig9520.21132.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9520 4648..5240 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9520.21132.1 ID=prot_Ecto-sp13_S_contig9520.21132.1|Name=mRNA_Ecto-sp13_S_contig9520.21132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
MVAVAYTHHLLHTARPHTRTPLRSYTATAPFRVARIFKMVNGLRLTTFLF
VMVALVALPNTRGTAVAEVAPAAPLGLYYEQWQQKQTEQTKLPLHLDFTS
PINGTRVEGPNVFLHYKIFNTLENRELTSTEVRDLSVSTTVCFKLHGFND
VPEICAPLRVTTVTIKDALPAKWHHVTGSIKDTRTGKL