prot_Ecto-sp13_S_contig12548.2111.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12548.2111.1
Unique Nameprot_Ecto-sp13_S_contig12548.2111.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length323
Homology
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: D7FQN3_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN3_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 3.270e-64
Identity = 103/155 (66.45%), Postives = 118/155 (76.13%), Query Frame = 0
Query:   33 RYLSHGQEWSEALRVQDRTRVIKFSLDPVWNEQFSLPVRRAGAVLKVKLWDWNLSIPDDPLGHFEVKIGGDLLAQKTVDRWYVLRTPSDLTSTKTPTGSDPTDTLAHDVPLHEPSIEERLEAYGKVRLELRFEFNELAETCSHIWPEEPPQKPRK 187
            RYLSHGQEWSE LRV+++TRVIKFSL+PVWNE+FSLPVRRAGAVL+++LWDWN SIPDDPLGH EVK+GGDLLAQK                                VPLHEPSIEER E+YG+VRL+LRFEFNELAETCS+IWPEEPP++P K
Sbjct:  113 RYLSHGQEWSEPLRVREKTRVIKFSLNPVWNEEFSLPVRRAGAVLRIRLWDWNASIPDDPLGHIEVKMGGDLLAQKD------------------------------GVPLHEPSIEERRESYGEVRLQLRFEFNELAETCSYIWPEEPPKRPLK 237          
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: A0A6H5JW30_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.840e-62
Identity = 134/347 (38.62%), Postives = 182/347 (52.45%), Query Frame = 0
Query:   33 RYLSHGQEWSEALRVQDRTRVIKFSLDPVWNEQFSLPVRRAGAVLKVKLWDWNLSIPDDPLGHFEVKIGGDLLAQKTVDRWYVLRTPSDL------------------------------------------------------TSTKTPTGSDPTDTLAHD------VPLHEPSIEERLEAYGKVRLELRFEFNELAETCSHIWPEEPPQKPRKEFSPNRIFYNWLLLQQLLLPYLEFLDGAGRVLGWRHSITFCLLCLVTLALLVVHPGMLIVTLNAVLLWIVTSRYWSHVIAQRQAESSGERPGSAQDIETG-AKPRKKRLRKKVRQLQKTFLPPMEATTDREV 318
            RYLS GQEWSE LR+ DRTR IK++L+PVWNE FSLP+RRAGA+L+V+LWDW+    D+ LG  EV I  +L +QKT+D WYVL  P DL                                                      TS     G+   D + HD       P  E  IE R + +G+VRL+LR EFNE AETCSH+WPEEPP+     FSPNR++YN +LL+QL  PY+  + GA  ++ W H     L   V L ++++HP +L+V +N  L+ I    Y  H  AQR+ +          D+E G A     + + K    +K+ LPP++A  DR++
Sbjct:  101 RYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPIRRAGAILRVELWDWDRGSCDESLGSVEVSIDKELRSQKTIDTWYVLDAPWDLKDSPSAVPDAHISRLAELEAFSEMEEEXXXXXXXXXXXXXXXXXXXXXXSSLRWTSVLGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRVEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGASAIVHWVHPWK-SLAWFVALVVMLLHPCLLMVVINGALMRIAIRGYLEHFAAQREDDEDYV------DVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDRKM 440          
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: D7G4V0_ECTSI (Protein kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 2.910e-61
Identity = 131/316 (41.46%), Postives = 174/316 (55.06%), Query Frame = 0
Query:   33 RYLSHGQEWSEALRVQDRTRVIKFSLDPVWNEQFSLPVRRAGAVLKVKLWDWNLSIPDDPLGHFEVKIGGDLLAQKT---------------------VDRWYVLRTPSDL--TSTKTPTGSDPTDTLAHD------VPLHEPSIEERLEAYGKVRLELRFEFNELAETCSHIWPEEPPQKPRKEFSPNRIFYNWLLLQQLLLPYLEFLDGAGRVLGWRHSITFCLLCLVTLALLVVHPGMLIVTLNAVLLWIVTSRYWSHVIAQRQAESSGERPGSAQDIETG-AKPRKKRLRKKVRQLQKTFLPPMEATTDREV 318
            RYLS GQEWSE LR+ DRTR IK++L+PVWNE FSLPVRRAGAVL+V+LWDW+    DD LG  EV I  +L +QK                              T S L  TS     G+   D + HD       P  E  IE R + +G+VRL+LRFEFNE AETCSH+WPEEPP+     FSPNR++YN +LL+QL  PY+  +  A  ++ W H     L   + L ++++HP +LIV +N  L+ I    Y  H  AQR+            D+E G A     + + K    +K+ LPP++A  DR++
Sbjct:  101 RYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPVRRAGAVLRVELWDWDRGSCDDSLGSVEVSIDKELRSQKLEAFSEMEEETXXXXXXXXXXXXXXXXXXXTTSSLRWTSVLGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQEASAIVHWVHPWK-SLAWFIALVVMLLHPCLLIVVINGALIRIAILGYLDHFAAQREDNEDDA------DVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDRKM 409          
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.220e-29
Identity = 57/80 (71.25%), Postives = 70/80 (87.50%), Query Frame = 0
Query:   29 CCIPRYLSHGQEWSEALRVQDRTRVIKFSLDPVWNEQFSLPVRRAGAVLKVKLWDWNLSIPDDPLGHFEVKIGGDLLAQK 108
            C   RYLSHGQEWSE LR++DRTR+IK +L+PVW+E+F LPVRRAGAVLKV++WDW+ S PDDPLGHFEV IG +LL+Q+
Sbjct:   16 CLTGRYLSHGQEWSERLRLKDRTRIIKTTLNPVWDEEFCLPVRRAGAVLKVEVWDWDRSSPDDPLGHFEVAIGEELLSQQ 95          
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: F0YFB3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFB3_AURAN)

HSP 1 Score: 86.7 bits (213), Expect = 5.210e-15
Identity = 62/213 (29.11%), Postives = 94/213 (44.13%), Query Frame = 0
Query:   23 SDTDSRCCIPRYLSHGQEWSEALRVQDRTRVIKFSLDPVWNEQFSLPVRRAGAVLKVKLWDWNLSIPDDPLGHFEVKIGGDLLAQKTVDRWYVLRTPSDLTSTKTPTGSDPTDTLAHDVPLHEPSIEERLEAYGKVRLELRFEFNELAETCSHIWPEEPPQKPRKEFSPNRIFYNWLLLQQLLLPYLEFLDGAGRVLGW---RHSITFCLLCL 232
            SD  +R  I     +G EW+E  R   ++  +K SL+P W+EQ    V R  AVL+V+++D ++S  DD LG  E+ I  DL     V RW  L      T+                             A   V L L +E + L E  S +W E+   K   +F  N ++ N + L + + PYL+    A +++ W   R S T+  +CL
Sbjct:  103 SDPYARLIITGKNKYGNEWTEEKRQTWQSATVKKSLNPGWHEQCEFFVPRYDAVLRVEIYDLDVSSADDLLGSVEIPIR-DLSFLGLVKRWVPLEIAEGFTA-----------------------------ASAAVHLHLEYEVSALGEASSMLWAEQRKTKDATKFDINLLYTNGMALNKEMKPYLDVATAAEKIVTWKDERKSRTWLAICL 285          
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: A0A1S8WTG2_9TREM (C2 domain protein n=1 Tax=Opisthorchis viverrini TaxID=6198 RepID=A0A1S8WTG2_9TREM)

HSP 1 Score: 54.3 bits (129), Expect = 1.170e-5
Identity = 28/77 (36.36%), Postives = 45/77 (58.44%), Query Frame = 0
Query:   42 SEALRVQDRTRVIKFSLDPVWNEQFSLPVRRAGAV--LKVKLWDWNLSIPDDPLGHFEVKIGGDLLAQKTVDRWYVL 116
            S+ L  + +T+ IK SLDPVW E F++ +R       L++++WDW+ +  DD +G   +  G   LA K +D W+ L
Sbjct:   18 SDELNRKFKTKTIKSSLDPVWEEAFTINIRPEDDAKRLQIEVWDWDRTSRDDFMG--SLSFGVTELASKPIDCWFKL 92          
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Match: A0A084GB88_PSEDA (C2 domain-containing protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084GB88_PSEDA)

HSP 1 Score: 55.8 bits (133), Expect = 6.960e-5
Identity = 23/52 (44.23%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   50 RTRVIKFSLDPVWNEQFSLPV-RRAGAVLKVKLWDWNLSIPDDPLGHFEVKI 100
            +T+ IK +L+PVWNE F +PV  R GA  ++ +WDW+L+   DPLG  ++ +
Sbjct: 1142 KTKTIKKTLNPVWNEYFEVPVPSRTGAKFRLSVWDWDLASQPDPLGEADISL 1193          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12548.2111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FQN3_ECTSI3.270e-6466.45C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JW30_9PHAE1.840e-6238.62C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G4V0_ECTSI2.910e-6141.46Protein kinase C, beta 1, like n=1 Tax=Ectocarpus ... [more]
A0A6H5JRL3_9PHAE1.220e-2971.25C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
F0YFB3_AURAN5.210e-1529.11Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1S8WTG2_9TREM1.170e-536.36C2 domain protein n=1 Tax=Opisthorchis viverrini T... [more]
A0A084GB88_PSEDA6.960e-544.23C2 domain-containing protein n=1 Tax=Pseudallesche... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 8..113
e-value: 0.0034
score: 26.6
IPR000008C2 domainPFAMPF00168C2coord: 49..115
e-value: 1.3E-10
score: 41.5
IPR000008C2 domainPROSITEPS50004C2coord: 50..97
score: 8.888
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 38..171
e-value: 1.3E-14
score: 56.3
NoneNo IPR availablePANTHERPTHR45911:SF4C2 DOMAIN-CONTAINING PROTEINcoord: 48..126
NoneNo IPR availablePANTHERPTHR45911FAMILY NOT NAMEDcoord: 48..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..322
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..257
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 48..121
NoneNo IPR availableTMHMMTMhelixcoord: 235..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12548contigEcto-sp13_S_contig12548:136..5012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12548.2111.1mRNA_Ecto-sp13_S_contig12548.2111.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12548 136..5012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12548.2111.1 ID=prot_Ecto-sp13_S_contig12548.2111.1|Name=mRNA_Ecto-sp13_S_contig12548.2111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
CEVNGLTTTACTTMSTPPPPIPSDTDSRCCIPRYLSHGQEWSEALRVQDR
TRVIKFSLDPVWNEQFSLPVRRAGAVLKVKLWDWNLSIPDDPLGHFEVKI
GGDLLAQKTVDRWYVLRTPSDLTSTKTPTGSDPTDTLAHDVPLHEPSIEE
RLEAYGKVRLELRFEFNELAETCSHIWPEEPPQKPRKEFSPNRIFYNWLL
LQQLLLPYLEFLDGAGRVLGWRHSITFCLLCLVTLALLVVHPGMLIVTLN
AVLLWIVTSRYWSHVIAQRQAESSGERPGSAQDIETGAKPRKKRLRKKVR
QLQKTFLPPMEATTDREVCVCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf