mRNA_Ecto-sp13_S_contig10188.211.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10188.211.1
Unique NamemRNA_Ecto-sp13_S_contig10188.211.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A6H5LF55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF55_9PHAE)

HSP 1 Score: 580 bits (1494), Expect = 1.380e-203
Identity = 321/477 (67.30%), Postives = 336/477 (70.44%), Query Frame = 1
Query:    1 GGPLSSPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFRE--------ENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQT-------------------------------GAQEVVLSEIGVSPEGTTRRLLLEG--------------------------------------------------------------------------------LTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLTRGSGAGMALSKIGIPCPPGSTATVGGKPVPSLAETLSSRMVAQLGEGATQIF 1074
            GGPLSSPQ+FLLANPPGPYTCLRTVDHRSVAML FHL+RLW SSQATGFGPAARAQGRQSLE+GTVETIARVTESFR+        ENAGGGCPECMTTVLYTHRRRPGKED GE LSDDDQP  A AFT ARTSES RK AAR  K+ +ICIMAHAWPLPTPPVDG+PAGVKVLIAGSGRS PEAKHS+WLRDRKRLDELKAQT                               GAQEVVLSEIG SPEGTTRRLLLEG                                                                                LTSN FVVEEDGAVCTAPSGVLLGGMRQ+LISVCDKEGIEVR DAPDISRAGRWREAFLTGTGRVVAPVSTL+VP IEDSSK+TRGSGA +ALSKIGIPCPPG+ ATVGGKPVPSLAETL SR+VA+LGE ATQIF
Sbjct:   92 GGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWHSSQATGFGPAARAQGRQSLEQGTVETIARVTESFRQGIYIVEKTENAGGGCPECMTTVLYTHRRRPGKEDVGEGLSDDDQPEGATAFTGARTSESPRKEAARRTKNSKICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSCPEAKHSSWLRDRKRLDELKAQTRRPVLKLISRDVFVRLAVSAVTFVHYVCLAVGAQEVVLSEIGFSPEGTTRRLLLEGMKRSSQAWTLPTFPEPKVILHPRCSPGLQRALPTDSALTSSSPLLRDVVRRTDQYSPTIANPKVLERLPALNTTPPHKSGLTSNFFVVEEDGAVCTAPSGVLLGGMRQLLISVCDKEGIEVRLDAPDISRAGRWREAFLTGTGRVVAPVSTLIVPEIEDSSKITRGSGAEVALSKIGIPCPPGNIATVGGKPVPSLAETLRSRVVAELGEAATQIF 568          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: D8LGW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW0_ECTSI)

HSP 1 Score: 519 bits (1337), Expect = 1.800e-182
Identity = 258/283 (91.17%), Postives = 267/283 (94.35%), Query Frame = 1
Query:    1 GGPLSSPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTG 849
            GGPLSSPQ+FLLANPPGPYTCLRTVDHRSVAML FHL+RLWQSSQATGFGPAARAQGRQSLE+ TVETIARVTESFREENAGGGCPECMTTVLYTHRRR GKEDAGE LSDDDQPG   AFT  RTS+  RKGAARP KD EICIMAHAWPLPTPPVDG+PAGVKVLIAGSGRSLP+AKHS+WLRDRKRL+ELKAQTGAQEVVLSEIG SPEGTTRRLLLEGLTSN FVVEEDGAV TAPSGVLLGGMRQ+LISVCDKEGIEVRFDAPDISRAGRWREAFLTG
Sbjct:   93 GGPLSSPQEFLLANPPGPYTCLRTVDHRSVAMLPFHLDRLWQSSQATGFGPAARAQGRQSLEQETVETIARVTESFREENAGGGCPECMTTVLYTHRRRLGKEDAGEGLSDDDQPGGTTAFTGTRTSKRPRKGAARPTKDREICIMAHAWPLPTPPVDGRPAGVKVLIAGSGRSLPKAKHSSWLRDRKRLEELKAQTGAQEVVLSEIGFSPEGTTRRLLLEGLTSNFFVVEEDGAVSTAPSGVLLGGMRQLLISVCDKEGIEVRFDAPDISRAGRWREAFLTG 375          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A7S3BDZ0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BDZ0_9VIRI)

HSP 1 Score: 117 bits (292), Expect = 1.440e-26
Identity = 99/301 (32.89%), Postives = 134/301 (44.52%), Query Frame = 1
Query:   16 SPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLT 918
            +P ++L + P G YT  RTV   SV  L FH+ RL +S+     G  A A     LE       AR+    R  +A G C   M                G S       G       A  S  +  GAA         + AHA PLP+ P    P  V+ ++ G+ RS  EAK S W+  R  LD +    GA EVVL    V   G     LLEGL+SN + VE DGA+ TA  GVL G +R V +  C++EG+ VR   P ++ A  W+   ++ T R+  PV  L+        ++T
Sbjct:   19 APGEWLQSGPRGAYTVARTVGLTSVFELDFHVQRLAKSASLMLEGDGAAAPAGSELE--ACCDAARL--HTRIVDAWGECVRAM----------------GPS-------GAKELKLSALLSWDVATGAAE--------LRAHAAPLPSRP----PHPVRAIVRGAPRSNAEAKDSAWIAARAGLDAVGKAAGANEVVL----VDGNGD----LLEGLSSNFYAVEADGALVTAEEGVLKGTVRDVALRACEREGVPVRLRPPRLADARSWKGCLVSSTSRLALPVDELVYEVAASGEEVT 272          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A061R9G1_9CHLO (Thioredoxin-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R9G1_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 2.080e-22
Identity = 81/294 (27.55%), Postives = 136/294 (46.26%), Query Frame = 1
Query:   22 QQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPR-----KDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLV 888
            ++ L  +  G YT +RTV H S+  L++H+ RL  +++                          + ES  +       P C+++++     RP   ++  +            F D     +  K   RP            ++AH   LP  P     + + V +AG+ RS   AK+S W+R+RK L++ +A  G  EV+L +     +G     + EGL+SN FV++ DG + TA  GVLLG +R V++ V D+EG+ V  + P +S   +W  AF+T T R++  V  L++
Sbjct:   39 KELLQRSKAGAYTTMRTVGHESILELTYHVERLANTARLM------------------------INESDSD------IPGCLSSLVDPQALRPYVLESVRAA--------VRQFLDINPEAAAVKAEMRPTVLITWDSAGFEVLAHVEALPELPR----SPIMVQVAGAPRSNAAAKNSEWVRERKELED-RAPKGCNEVLLMD----EQGN----VFEGLSSNFFVIK-DGTIQTAQDGVLLGTVRDVVLKVADREGVPVLLEPPSVSEIDQWXAAFITSTSRLLLRVDELIL 280          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A7S3XAY8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XAY8_9CHLO)

HSP 1 Score: 104 bits (260), Expect = 3.780e-22
Identity = 87/291 (29.90%), Postives = 125/291 (42.96%), Query Frame = 1
Query:   28 FLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIE 900
            +L   P G YT  RTV  R+V     H++RL  S++A    P A     Q L +     +A    +F   N G    E   T L T                                           +  E  ++ H  PLP  P       VKVL+ G  RS  +AK S W+RDRK L++ K +    EV+L       +G+    L EGL+SN FVV+ DG + TA   +L G +R + + VC K GI V+ +AP+I    +W  A ++ T R++ PV  L  P ++
Sbjct:   31 WLAEAPRGAYTTARTVRSRAVFEFEAHVDRLVASAKAMEAPPEASINMEQRLRD----AMASAVNAFERNNPGSD-GEVRLTALLTW------------------------------------------EGNENELLCHVGPLPQRPKQP----VKVLVRGEPRSNAKAKDSEWVRDRKPLEDSKPKD-VNEVILE----GEDGS----LYEGLSSNFFVVQ-DGTLYTAGKNILEGTVRLLTLEVCRKHGIPVKLEAPNIKDLEKWDGALISSTSRLLLPVMDLSAPDLD 260          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A2P6VR44_9CHLO (Class IV n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VR44_9CHLO)

HSP 1 Score: 103 bits (256), Expect = 3.710e-21
Identity = 98/302 (32.45%), Postives = 133/302 (44.04%), Query Frame = 1
Query:   28 FLLANPPGPYTCLRTVDHRSVAM-LSFHLNRLWQSSQATGFGPAARAQGRQS------------------LEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTD-ARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPV 873
            +L A P G YT  RTV   + A  L FH+NRL  SS A      A A G Q+                  L    +  +     ++R   A     E   TVL T    PG  D G+      QP  ++  TD A  S+   K A  P       +  H  PLP  P       V+V++ G  R    AK S W+R RK +++ +      E VL    V  +G     L EGLTSN+F V  DGAV TA  G+L G +R+V++ V  +EGI V  + P +S   RW    ++ T R++ PV
Sbjct:   22 WLAAAPRGAYTTARTVGGGAAAFELGFHINRL-ASSAALMMQADAAAAGTQAAGPPXXXXXXXEAADAARLRPRVLAALRAAVRAYRAATAHSD-GELKLTVLVTW---PGS-DRGQQAGGQAQP--SSGSTDGASASDGASKSADAPPAAAAADVYVHVAPLPPRPAPP----VRVVMRGQPRQNAAAKDSEWVRQRKAIEQ-ELPPDVNEAVL----VGADGA----LFEGLTSNVFAVM-DGAVHTAGEGILAGSVREVVLQVARREGIPVVLEPPRLSDLPRWEGCMISSTSRLLLPV 301          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A7S2WBR7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WBR7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.280e-19
Identity = 79/302 (26.16%), Postives = 138/302 (45.70%), Query Frame = 1
Query:   19 PQQFLLANPPGPYTCLRTVDHR-----SVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRA--GRWREAFLTGTGRVVAPVSTLLVPAIED 903
            P+ F+ ++P G YTC+RT D        V  + FH+ R+    Q  G          + +EE  +  +A     FR+     G    + T+L      PG++            GE    + A+ +  L++ A       E+ ++ +A                  + G+   LP  K S+W+ +R+ LD LK+   A EV+++++       +   +LEGLT+N+FV+ +D  + TAPS +L G +R +++ VC + G+ V F  P +S A  G+W   F+T   + +A V  + +   ED
Sbjct:   19 PRDFINSHPCGVYTCMRTKDVHLQGADDVVDVEFHVKRILHGWQQLG----NTEMSHEKVEE-LLGRVAATCSGFRQAFPKAGGRGLIVTLLVF----PGEK------------GEPKIVSHAQPTSKLQEYA-------ELALITNAR----------------TVNGNREKLPSVKASSWISERQTLDLLKSSHNATEVIMTDL-------SGECVLEGLTTNVFVLCDDLKIYTAPSQILEGSVRDIVLEVCRELGVTVVFKFPRVSDAKKGKWLGCFVTNVSKPLAIVKNVKIMVSED 269          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A1Y2BFH4_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BFH4_9FUNG)

HSP 1 Score: 87.8 bits (216), Expect = 4.480e-16
Identity = 86/296 (29.05%), Postives = 124/296 (41.89%), Query Frame = 1
Query:   22 QQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDG----AVCTAPSGVLLGG--MRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVP 891
            ++FLL N  G YT  RT++   V   + HLNRL +S          R   ++   + T  TI+    +  +E                            SLS +         TD  T   L    +    +  I I           +D KP    V   GS R+ P  K S W RDRK L+    + G  E++L++        T   + EGLTSN FVV +DG    AV TAP   +LGG  +R V  SVC + GI  R++ P +     W  AF+T + R++ PV  +++P
Sbjct:    7 KEFLLNNTRGAYTATRTLNRTKVMNWNIHLNRLIESWIGLSKVVGNREPAKEFDLDATKTTISAALGTCLQEYFASTA----------------------SLSKN-------GLTDEATITILLLEPSNNLAELRIHIEFQ--------LDTKPQPCTVAFYGSPRTYPCIKDSQWSRDRKPLELAAMKPGISELLLTD--------TDGNIYEGLTSNFFVVVQDGDGKLAVVTAPVQHVLGGTILRNVE-SVCGRLGIRFRYEFPKVGSVSTWVGAFVTSSLRILVPVQRIILP 256          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A1X2HWC4_SYNRA (Aminotransferase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HWC4_SYNRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.910e-16
Identity = 89/303 (29.37%), Postives = 136/303 (44.88%), Query Frame = 1
Query:   25 QFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFGPAARAQGRQSLEEGTVETIARVTESFRE-ENAGGGCPECMTTVLYTHRRRPGKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQEVVLSEIGVSPEGTTRRLLLEGLTSNLFVV--EEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDIS--RAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLT 918
            QF+L  P G YT +RT+D  S+   S H+ RL  S     F     A G +S +      I      FR+ ++      + +   L T R+R  + +A  S+          A+ D + +         PR        AH  PL  PP D   A V V+     R+ P  K S W+RDR  L+  K  T   EVVL++     +G     + EG+ SN F V       VC     +LLG + +++++VC+++ I + +  P +S  RAG W   FLT T R++ P+  + V   +D S +T
Sbjct:   66 QFILQQPRGAYTGMRTLDRTSIVAFSSHVKRLTTSLSLMTFP----ANGAESAD------ITDQLAPFRDTDSLTHSLKDLLRIGLQTFRQRYPEYEAKVSV--------LIAY-DFKINT--------PR------CWAHFSPLHAPPPD---AYVHVVAEEKARATPVVKDSQWVRDRAGLERAKP-TEINEVVLTDA----DGH----IYEGMASNFFAVCANPTRLVCAPLDHILLGTVMKIVMTVCEQKKIPIEWVFPKLSDARAGTWEGCFLTSTSRLLLPIEAIHV---KDGSPVT 320          
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Match: A0A484EA90_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EA90_BRELC)

HSP 1 Score: 87.8 bits (216), Expect = 6.710e-16
Identity = 62/178 (34.83%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  409 PRKD-GEICIMAHAWPLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQ------EVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQVLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIEDSSKLTR 921
            PR D  + C+  H  PLPTP          VL+ G GR+    KH+ W++DR  +++  A+          EV+LS      +    +LLLEGLT+NLFVV+ D  V TA + VL G  R +++  C    I V  +AP +S    W+ AF+T TG     +    +P   DSS  T+
Sbjct:  143 PRPDIHDYCVAVHVCPLPTP----LRFTSTVLVYGEGRTNAHCKHTQWIKDRVIIEQHAARIRENRGEPIDEVLLSTTISGGD----KLLLEGLTTNLFVVKGD-KVYTAENDVLHGSTRMLVLKACADLSIPVVLEAPKLSERDLWQAAFVTRTGEEENAIEATSIP--SDSSGYTQ 309          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10188.211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LF55_9PHAE1.380e-20367.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGW0_ECTSI1.800e-18291.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3BDZ0_9VIRI1.440e-2632.89Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A061R9G1_9CHLO2.080e-2227.55Thioredoxin-like protein n=1 Tax=Tetraselmis sp. G... [more]
A0A7S3XAY8_9CHLO3.780e-2229.90Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A2P6VR44_9CHLO3.710e-2132.45Class IV n=1 Tax=Micractinium conductrix TaxID=554... [more]
A0A7S2WBR7_9STRA1.280e-1926.16Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A1Y2BFH4_9FUNG4.480e-1629.05Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0A1X2HWC4_SYNRA4.910e-1629.37Aminotransferase n=1 Tax=Syncephalastrum racemosum... [more]
A0A484EA90_BRELC6.710e-1634.83Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10188contigEcto-sp13_S_contig10188:1..2777 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score523.5
Seed ortholog evalue7.9e-146
Seed eggNOG ortholog2880.D8LGW0
Model size1077
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Amino-transferase class IV
EggNOG OGs2CZHV@1,2SAEW@2759
Cds size1077
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10188.211.1prot_Ecto-sp13_S_contig10188.211.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10188 1..2777 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462513.520056-CDS-Ecto-sp13_S_contig10188:0..491681462513.520056-CDS-Ecto-sp13_S_contig10188:0..49Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10188 1..49 +
1681462513.5312068-CDS-Ecto-sp13_S_contig10188:399..5851681462513.5312068-CDS-Ecto-sp13_S_contig10188:399..585Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10188 400..585 +
1681462513.5399199-CDS-Ecto-sp13_S_contig10188:781..11341681462513.5399199-CDS-Ecto-sp13_S_contig10188:781..1134Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10188 782..1134 +
1681462513.549653-CDS-Ecto-sp13_S_contig10188:1585..16611681462513.549653-CDS-Ecto-sp13_S_contig10188:1585..1661Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10188 1586..1661 +
1681462513.559174-CDS-Ecto-sp13_S_contig10188:2027..22101681462513.559174-CDS-Ecto-sp13_S_contig10188:2027..2210Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10188 2028..2210 +
1681462513.5696971-CDS-Ecto-sp13_S_contig10188:2547..27771681462513.5696971-CDS-Ecto-sp13_S_contig10188:2547..2777Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10188 2548..2777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10188.211.1

>prot_Ecto-sp13_S_contig10188.211.1 ID=prot_Ecto-sp13_S_contig10188.211.1|Name=mRNA_Ecto-sp13_S_contig10188.211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
GGPLSSPQQFLLANPPGPYTCLRTVDHRSVAMLSFHLNRLWQSSQATGFG
PAARAQGRQSLEEGTVETIARVTESFREENAGGGCPECMTTVLYTHRRRP
GKEDAGESLSDDDQPGEAAAFTDARTSESLRKGAARPRKDGEICIMAHAW
PLPTPPVDGKPAGVKVLIAGSGRSLPEAKHSNWLRDRKRLDELKAQTGAQ
EVVLSEIGVSPEGTTRRLLLEGLTSNLFVVEEDGAVCTAPSGVLLGGMRQ
VLISVCDKEGIEVRFDAPDISRAGRWREAFLTGTGRVVAPVSTLLVPAIE
DSSKLTRGSGAGMALSKIGIPCPPGSTATVGGKPVPSLAETLSSRMVAQL
GEGATQIF*
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mRNA from alignment at Ecto-sp13_S_contig10188:1..2777+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10188.211.1 ID=mRNA_Ecto-sp13_S_contig10188.211.1|Name=mRNA_Ecto-sp13_S_contig10188.211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10188:1..2777+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGAGGCCCGCTTTCTTCACCGCAACAGTTTCTTCTTGCCAATCCTCCAGG TACATGCACAATGCAACGGAATGGTTCCTGTTTCGAGGCACGCAAGGGCC GCTACTCTGTGTACGATAATATCGTGTGCAAACCGCGTCACAAAACGCGA CATCATACACCAACGACTCCTTCTTTTCCTTGGAAACGTCTGCACACGAT TCACATATGAACAGCGGTCAGCAGTTTGAACAGGGGTGATGATGACTGCA AATGAAGAACTAAAGCACATGTCACGTGTATCTTTGAGGAACGTATATGC GAGTAAGACTTCGGGCACACCTCACCTGATGATCAGCTGCGATTTGGCGG TCGTCGGCTGCGTATGGCGCGATAACATTCACTCTTTTCCTTCTCGCAGG CCCGTACACGTGCCTGAGGACGGTCGACCATCGGTCGGTAGCCATGCTGT CGTTTCATCTGAACAGGCTTTGGCAGTCTTCTCAAGCCACCGGTTTTGGA CCTGCGGCAAGGGCACAAGGTCGGCAGTCGCTAGAAGAGGGGACGGTGGA GACCATCGCTCGGGTGACCGAGTCGTTTCGAGAAGGTATTTGAATTGTAG AAAAACCAGGTAGGTGCCTTGGCCGTTTCCCGTAGAGGACAGCGGACCGA ACCAACACGAAAAGCCTTGTACTTTTGATGAAACCCTTCGTAGCTGCTCG CTCACCGCCTTCCTCTTCCGGCAAGAGCCGGCGTCGCGGCTCTGACCTCT GCCACAACTGATTTTGTGTGCCGGCTATCAGAGAATGCTGGCGGCGGCTG TCCAGAGTGCATGACGACAGTCTTGTACACGCACCGCCGCAGGCCTGGCA AAGAAGACGCAGGCGAAAGCTTGTCAGACGATGACCAACCCGGAGAAGCG GCAGCATTCACGGACGCCAGGACGTCGGAAAGTCTACGAAAAGGGGCAGC CAGACCGAGGAAAGACGGTGAAATATGCATTATGGCGCATGCCTGGCCAT TGCCCACGCCCCCGGTGGATGGAAAACCCGCGGGAGTGAAGGTGCTCATT GCTGGATCGGGCAGATCGTTGCCAGAAGCGAAGCATTCGAACTGGTTGCG AGATAGGAAACGACTGGACGAGCTCAAAGCTCAGGTAATTTTATGTTGTG AAGTGGTAAGTTGAAACTTGTGGGTGTTTCGTGCCATCTGCACGGCAAGC TAGTTGACACACAGCGCCGAACAATTCACGCAAGTAGGTGAGGCGGGGGC GCTCTTCATGATGCCGACGCGGCGCCCGGTACTAGAGCTATCTCGCGTGA TCTCTTTGTGCGGCTCGCAGGTTCTGCAGTGACCTTCGTGCATTACGTGT GTCTTGCTTTGGTACGTGGTGTGTCTTTTTCTTGATACCACATGGCCGTG GCACCACACAACACCGAGCCTCGGAGACTCATTGGCAACGAGAGGTTTTT TCGGTTGCTTTTGAAGGCAACAGCGTCGCTGGGTTTCACTTCACAGGGTT GCTCGCAAATTGCCTGTTCACCCACAGCCTCTGGTATCATCCCTGTACCA GTTATTTTGACACCGGGTTCGACCCATTTGCGCAGACAGGTGCACAGGAG GTAGTGCTGTCCGAGATCGGTGTTTCACCTGAGGGGACTACTCGGAGACT CCTTCTAGAAGGTGTGGCTGTGGGTTGTCGTTTGCTTCTTCCTAGCGCAG AAGTCCTGCGACTGTGCACCCCTTCATCATGATCACACCGCCCACTGGGA CGGAGCTACTCCGTTCTTGTTTCCAACGCCGATTGACGCATGAGAAGGTT GTCACGAGCGTGGACGCTTCCGATGTCCCCCGAACCAAAGGTCATCCTCA ATCCCCGGTGCTCACCTCGTCTTTAGCGAGCTTCGCCAACTGATTCCGCA CTGACGTCATCGTCGCCATTACTGCGAGACGTGGTCCGTCGAACGGATCA ATAGTCGCCCACAATCCCAAACCCTAAGGATATGGAGCGCCTCCCGGCGC TTATCACCACCCCCCCGCTCCAATCAGGACTAACCTCCAACTTGTTCGTC GTGGAGGAAGATGGAGCGGTGTGCACAGCGCCGTCGGGAGTGCTCTTGGG AGGGATGCGCCAAGTATTGATCTCGGTGTGCGACAAAGAGGGAATCGAAG TCCGGTTTGACGCCCCCGATATTTCCAGGGCTGGTCGCTGGCGAGAGGCG TTCCTGACAGGTAAAAGAGGAGGGTACGACCGCGGCCTTCGTGTACGCGA ATAAGGTACATGGGTGTGCACGCTGATGTGAGGTGAAACATGTCATGGTC ATCATATGCGGAAGACGCGAGTACGGACGCTGTGATATCGACGACATGAA ATTGTCTCCCACGTCACGTGTCGAAGAGCGGAGAGCGTTTGTTTGTGTGC TCGCGCTCTTCAGGTAGACCACATGGTACGAGAAATCCAATCTGCGGACG GCGTTCTGTACCCTCTGATACAGGAGACAAGGATTGACCGCTGTCCAGAA TAGTCTCAACAAGGCCTGACTCGATCATTTTTCGGGTGGTTTCTCAGGAA CCGGACGAGTAGTGGCCCCAGTCTCCACTCTTCTCGTGCCCGCGATTGAA GATTCAAGCAAGCTAACTCGAGGAAGCGGTGCGGGGATGGCTTTGTCCAA GATAGGCATCCCGTGCCCCCCGGGAAGCACCGCCACGGTTGGTGGGAAAC CCGTGCCATCGCTGGCGGAGACTCTCAGCAGTCGCATGGTGGCACAACTT GGGGAAGGGGCGACACAGATTTTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10188:1..2777+

>mRNA_Ecto-sp13_S_contig10188.211.1 ID=mRNA_Ecto-sp13_S_contig10188.211.1|Name=mRNA_Ecto-sp13_S_contig10188.211.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10188:1..2777+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGAGGCCCGCTTTCTTCACCGCAACAGTTTCTTCTTGCCAATCCTCCAGG
CCCGTACACGTGCCTGAGGACGGTCGACCATCGGTCGGTAGCCATGCTGT
CGTTTCATCTGAACAGGCTTTGGCAGTCTTCTCAAGCCACCGGTTTTGGA
CCTGCGGCAAGGGCACAAGGTCGGCAGTCGCTAGAAGAGGGGACGGTGGA
GACCATCGCTCGGGTGACCGAGTCGTTTCGAGAAGAGAATGCTGGCGGCG
GCTGTCCAGAGTGCATGACGACAGTCTTGTACACGCACCGCCGCAGGCCT
GGCAAAGAAGACGCAGGCGAAAGCTTGTCAGACGATGACCAACCCGGAGA
AGCGGCAGCATTCACGGACGCCAGGACGTCGGAAAGTCTACGAAAAGGGG
CAGCCAGACCGAGGAAAGACGGTGAAATATGCATTATGGCGCATGCCTGG
CCATTGCCCACGCCCCCGGTGGATGGAAAACCCGCGGGAGTGAAGGTGCT
CATTGCTGGATCGGGCAGATCGTTGCCAGAAGCGAAGCATTCGAACTGGT
TGCGAGATAGGAAACGACTGGACGAGCTCAAAGCTCAGACAGGTGCACAG
GAGGTAGTGCTGTCCGAGATCGGTGTTTCACCTGAGGGGACTACTCGGAG
ACTCCTTCTAGAAGGACTAACCTCCAACTTGTTCGTCGTGGAGGAAGATG
GAGCGGTGTGCACAGCGCCGTCGGGAGTGCTCTTGGGAGGGATGCGCCAA
GTATTGATCTCGGTGTGCGACAAAGAGGGAATCGAAGTCCGGTTTGACGC
CCCCGATATTTCCAGGGCTGGTCGCTGGCGAGAGGCGTTCCTGACAGGAA
CCGGACGAGTAGTGGCCCCAGTCTCCACTCTTCTCGTGCCCGCGATTGAA
GATTCAAGCAAGCTAACTCGAGGAAGCGGTGCGGGGATGGCTTTGTCCAA
GATAGGCATCCCGTGCCCCCCGGGAAGCACCGCCACGGTTGGTGGGAAAC
CCGTGCCATCGCTGGCGGAGACTCTCAGCAGTCGCATGGTGGCACAACTT
GGGGAAGGGGCGACACAGATTTTCTAG
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