mRNA_Ecto-sp13_S_contig9470.21082.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: D8LFP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI) HSP 1 Score: 211 bits (538), Expect = 3.580e-61 Identity = 110/120 (91.67%), Postives = 112/120 (93.33%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
QAANMYSVRSYAIGYAVAELPYILF+SLAFCSIFYWMT LANSA QFFMYWLYFILWISL+VFTGMMLVMV AETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE
Sbjct: 1165 QAANMYSVRSYAIGYAVAELPYILFMSLAFCSIFYWMTDLANSAHQFFMYWLYFILWISLMVFTGMMLVMV------AETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 1278
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A6H5K7U8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U8_9PHAE) HSP 1 Score: 203 bits (517), Expect = 1.520e-59 Identity = 101/120 (84.17%), Postives = 110/120 (91.67%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYW+TGLA+SA +FFMYWLYF+ +VFTGMM VMVLPN QVA+TL ALSSMFSLFAGFLI+PAK+PDPWLFA+YLNPLHYVVE
Sbjct: 518 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWITGLADSADRFFMYWLYFLXXXXXMVFTGMMFVMVLPNTQVAQTLAGALSSMFSLFAGFLISPAKIPDPWLFAFYLNPLHYVVE 637
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: D8LFN4_ECTSI (Pleiotropic drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI) HSP 1 Score: 204 bits (518), Expect = 1.780e-58 Identity = 102/120 (85.00%), Postives = 109/120 (90.83%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYW+TGLA+SA QFFMYWLYF +VFTGMM VMVLPN QVA+TL ALSSMFSLFAGFLI+PAK+PDPWLFA+YLNPLHYVVE
Sbjct: 1253 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWITGLADSADQFFMYWLYFXXXXXXMVFTGMMFVMVLPNTQVAQTLAGALSSMFSLFAGFLISPAKIPDPWLFAFYLNPLHYVVE 1372
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: D7FQN0_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN0_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.260e-42 Identity = 73/120 (60.83%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
+AANMYS +Y IGY VAE+PYI+ I+LAFC IFY++ GLA +A QFF YW+YF+LW++ +VF GMM V ++P+ A L L SMFS+FAGFLI+PAK+P WL+AYYLNPLHY++E
Sbjct: 402 KAANMYSSLAYVIGYTVAEVPYIVVITLAFCCIFYFVMGLAATAHQFFFYWMYFMLWVTFMVFNGMMFVFIIPSFSTAGVLAGTLVSMFSVFAGFLISPAKIPGLWLWAYYLNPLHYILE 521
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A835Z0F1_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F1_9STRA) HSP 1 Score: 116 bits (290), Expect = 9.440e-28 Identity = 53/120 (44.17%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
QAA MY V+ Y +GY +AE+PY++F +L SIFYWM A +FF +WL+F L + + F G L +LP+I+ A+ L S +S+F++F GF I+P ++P+ W++AYY+ P HY +E
Sbjct: 1184 QAARMYHVQPYILGYFLAEIPYLIFNTLLCISIFYWMANFEADAAKFFWFWLFFFLNTTAMTFFGHGLTAILPSIKDAQALASVSNSLFAVFGGFFISPGQIPNYWIWAYYITPFHYAIE 1303
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A835ZIR5_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR5_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.350e-25 Identity = 51/120 (42.50%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
QA+NMY+V+ +++G+ +AE+PY++F +L +IFY+M LA A +FF L S + F G + ++LP ++ A++ G ++S F++F GFLI+PA +PD W++AYYL+PLHY +E
Sbjct: 1110 QASNMYAVQPFSLGHFLAEIPYLIFNTLLSTTIFYFMANLAPEAAKFFWXXXXXXLNTSAMTFLGHAMTVLLPTVKAAQSFGGVINSFFAVFGGFLISPALIPDYWIWAYYLSPLHYAIE 1229
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A6G0XTE1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE1_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.330e-22 Identity = 49/120 (40.83%), Postives = 76/120 (63.33%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
+A+ MY+ YA Y++ E+PY+LF SL F +FY+M L +G FF ++LY++L+ + G LV VLP+++ A L+S+ SLFAGF I+ +PD W Y+++PLHY +E
Sbjct: 1094 RASGMYATYPYATVYSLVEIPYVLFNSLVFSVVFYFMIDLKPDSGAFFWFYLYYMLYNLFATYLGQFLVAVLPDLRTAVVATGGLNSLISLFAGFFIHKHSIPDGWSILYWMSPLHYTLE 1213
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A6U4JUK8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JUK8_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.950e-21 Identity = 44/120 (36.67%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
+AANMY+V +Y++ + E+PY++ ISL FC+++Y G FF+Y+L+ LWIS+ F G V ++P A GS + + + F GF+ A++P+ +F ++ +PLHYV E
Sbjct: 22 RAANMYTVGAYSLSIGLVEIPYLIMISLVFCTVYYLSVGFTLDPVHFFLYYLFIFLWISMTTFYGQFWVALMPTRTAAMAAGSGVIQIINFFGGFIQPVAEIPNHLIFFHWASPLHYVFE 141
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A7S1TP17_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP17_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.840e-21 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 1 QAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
+AANMY Y + AVAE+PYI + + FC ++Y+ GL +AG FF Y+LY +LW++++ F G +V ++P A +G+ + +F+LFAGF+ P + F ++ +P+HYV E
Sbjct: 1247 RAANMYRSEVYNMSIAVAEVPYIALVCMVFCVVYYFTVGLQATAGHFFEYYLYVLLWVAVMTFYGQFVVALMPTRVAAMAVGAGIVQLFNLFAGFIAPPQDINPQIQFFHWASPMHYVFE 1366
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Match: A0A7S0AHY2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHY2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.340e-20 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1
Query: 13 MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFILWISLLVFTGMMLVMVLPNIQVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 360
MY+ S ++ AE+P+I++ SLAF +FY+M G A+ A +FF Y L+F L ++ + G ML +L + + A+ LGS ++ M +LF G LI P + WLF Y++ PLHY +E
Sbjct: 459 MYNSSSINAAFSFAEIPFIIWASLAFVVVFYFMLGFASEAAKFFTYLLFFALTLATFTYLGQMLTALLRDAETAQLLGSGVAGMSALFCGILIKPQFISSFWLFMYWITPLHYTLE 574 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9470.21082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig9470.21082.1 >prot_Ecto-sp13_S_contig9470.21082.1 ID=prot_Ecto-sp13_S_contig9470.21082.1|Name=mRNA_Ecto-sp13_S_contig9470.21082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp MYSVRSYAIGYAVAELPYILFISLAFCSIFYWMTGLANSAGQFFMYWLYFback to top mRNA from alignment at Ecto-sp13_S_contig9470:3348..4741+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig9470.21082.1 ID=mRNA_Ecto-sp13_S_contig9470.21082.1|Name=mRNA_Ecto-sp13_S_contig9470.21082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1394bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9470:3348..4741+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig9470:3348..4741+ >mRNA_Ecto-sp13_S_contig9470.21082.1 ID=mRNA_Ecto-sp13_S_contig9470.21082.1|Name=mRNA_Ecto-sp13_S_contig9470.21082.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp13_S_contig9470:3348..4741+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |